RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 CCR3P51677 355 aa11.03□□□□□ -0.64
CCDC171-208ENST00000486641 HSPA2P54652 639 aa11.03□□□□□ -0.64
CCDC171-208ENST00000486641 CREB5Q02930 508 aa11.03□□□□□ -0.64
CCDC171-208ENST00000486641 DPYSL3Q14195 570 aa11.03□□□□□ -0.64
CCDC171-208ENST00000486641 LRRC38Q5VT99 294 aa11.03□□□□□ -0.64
CCDC171-208ENST00000486641 SPOPLQ6IQ16 392 aa11.03□□□□□ -0.64
CCDC171-208ENST00000486641 PACS1Q6VY07 963 aa11.03□□□□□ -0.64
CCDC171-208ENST00000486641 TPTE2Q6XPS3 522 aa11.03□□□□□ -0.64
CCDC171-208ENST00000486641 MAVSQ7Z434 540 aa11.03□□□□□ -0.64
CCDC171-208ENST00000486641 SIAH1Q8IUQ4 282 aa11.03□□□□□ -0.64
CCDC171-208ENST00000486641 FAM71DQ8N9W8 422 aa11.03□□□□□ -0.64
CCDC171-208ENST00000486641 RAB3IL1Q8TBN0 382 aa11.03□□□□□ -0.64
CCDC171-208ENST00000486641 PIWIL2Q8TC59 973 aaKnown RBP11.03□□□□□ -0.64
CCDC171-208ENST00000486641 TMC2Q8TDI7 906 aa11.03□□□□□ -0.64
CCDC171-208ENST00000486641 LRGUKQ96M69 825 aa11.03□□□□□ -0.64
CCDC171-208ENST00000486641 CORO1BQ9BR76 489 aa11.03□□□□□ -0.64
CCDC171-208ENST00000486641 PLGRKTQ9HBL7 147 aa11.03□□□□□ -0.64
CCDC171-208ENST00000486641 XPNPEP1Q9NQW7 623 aa11.03□□□□□ -0.64
CCDC171-208ENST00000486641 C1orf112Q9NSG2 853 aa11.03□□□□□ -0.64
CCDC171-208ENST00000486641 RRN3Q9NYV6 651 aa11.03□□□□□ -0.64
CCDC171-208ENST00000486641 ZNF180Q9UJW8 692 aa11.03□□□□□ -0.64
CCDC171-208ENST00000486641 GREB1LQ9C091 1923 aaPredicted RBP11.03□□□□□ -0.64
CCDC171-208ENST00000486641 CST8O60676 142 aa11.03□□□□□ -0.64
CCDC171-208ENST00000486641 CFBP00751 764 aa11.03□□□□□ -0.64
CCDC171-208ENST00000486641 ZFXP17010 805 aaPredicted RBP11.03□□□□□ -0.64
CCDC171-208ENST00000486641 CLCN2P51788 898 aa11.03□□□□□ -0.64
CCDC171-208ENST00000486641 NAA20P61599 178 aa11.03□□□□□ -0.64
CCDC171-208ENST00000486641 SNRPFP62306 86 aaKnown RBP11.03□□□□□ -0.64
CCDC171-208ENST00000486641 ELMSAN1Q6PJG2 1045 aa11.03□□□□□ -0.64
CCDC171-208ENST00000486641 B3GNT9Q6UX72 402 aa11.03□□□□□ -0.64
CCDC171-208ENST00000486641 C15orf52Q6ZUT6 534 aaKnown RBP11.03□□□□□ -0.64
CCDC171-208ENST00000486641 TRMT1LQ7Z2T5 733 aaKnown RBP11.03□□□□□ -0.64
CCDC171-208ENST00000486641 TICAM1Q8IUC6 712 aa11.03□□□□□ -0.64
CCDC171-208ENST00000486641 GALNT4Q8N4A0 578 aa11.03□□□□□ -0.64
CCDC171-208ENST00000486641 LINC00116Q8NCU8 138 aa11.03□□□□□ -0.64
CCDC171-208ENST00000486641 GIPC3Q8TF64 312 aa11.03□□□□□ -0.64
CCDC171-208ENST00000486641 ZNF516Q92618 1163 aa11.03□□□□□ -0.64
CCDC171-208ENST00000486641 CMTM5Q96DZ9 223 aa11.03□□□□□ -0.64
CCDC171-208ENST00000486641 MCEEQ96PE7 176 aa11.03□□□□□ -0.64
CCDC171-208ENST00000486641 NRDE2Q9H7Z3 1164 aa11.03□□□□□ -0.64
CCDC171-208ENST00000486641 IFT122Q9HBG6 1241 aa11.03□□□□□ -0.64
CCDC171-208ENST00000486641 TTLL3Q9Y4R7 772 aa11.03□□□□□ -0.64
CCDC171-208ENST00000486641 TMEM150BA6NC51 233 aa11.02□□□□□ -0.64
CCDC171-208ENST00000486641 BIRC5O15392 142 aa11.02□□□□□ -0.64
CCDC171-208ENST00000486641 P4HBP07237 508 aaKnown RBP11.02□□□□□ -0.64
CCDC171-208ENST00000486641 COL6A2P12110 1019 aa11.02□□□□□ -0.64
CCDC171-208ENST00000486641 ZNF24P17028 368 aa11.02□□□□□ -0.64
CCDC171-208ENST00000486641 NCF2P19878 526 aaPredicted RBP11.02□□□□□ -0.64
CCDC171-208ENST00000486641 IDH3AP50213 366 aa11.02□□□□□ -0.64
CCDC171-208ENST00000486641 CDK9P50750 372 aaKnown RBP11.02□□□□□ -0.64
CCDC171-208ENST00000486641 C1QBPQ07021 282 aaKnown RBP11.02□□□□□ -0.64
CCDC171-208ENST00000486641 CYP24A1Q07973 514 aa11.02□□□□□ -0.64
CCDC171-208ENST00000486641 GRAPQ13588 217 aa11.02□□□□□ -0.64
CCDC171-208ENST00000486641 C16orf72Q14CZ0 275 aa11.02□□□□□ -0.64
CCDC171-208ENST00000486641 ANKDD1AQ495B1 522 aa11.02□□□□□ -0.64
CCDC171-208ENST00000486641 BRDTQ58F21 947 aaPredicted RBP11.02□□□□□ -0.64
CCDC171-208ENST00000486641 RARS2Q5T160 578 aaKnown RBP11.02□□□□□ -0.64
CCDC171-208ENST00000486641 LMBRD2Q68DH5 695 aaPredicted RBP11.02□□□□□ -0.64
CCDC171-208ENST00000486641 PDPK2PQ6A1A2 396 aa11.02□□□□□ -0.64
CCDC171-208ENST00000486641 DHRS4L2Q6PKH6 230 aa11.02□□□□□ -0.64
CCDC171-208ENST00000486641 ATG14Q6ZNE5 492 aa11.02□□□□□ -0.64
CCDC171-208ENST00000486641 NDUFAF2Q8N183 169 aa11.02□□□□□ -0.64
CCDC171-208ENST00000486641 PHTF2Q8N3S3 785 aa11.02□□□□□ -0.64
CCDC171-208ENST00000486641 GRAPLQ8TC17 118 aaPredicted RBP11.02□□□□□ -0.64
CCDC171-208ENST00000486641 PPP4R1Q8TF05 950 aa11.02□□□□□ -0.64
CCDC171-208ENST00000486641 TEKT3Q9BXF9 490 aa11.02□□□□□ -0.64
CCDC171-208ENST00000486641 WDR11Q9BZH6 1224 aa11.02□□□□□ -0.64
CCDC171-208ENST00000486641 MAF1Q9H063 256 aa11.02□□□□□ -0.64
CCDC171-208ENST00000486641 COPS7BQ9H9Q2 264 aaPredicted RBP11.02□□□□□ -0.64
CCDC171-208ENST00000486641 PNPLA8Q9NP80 782 aa11.02□□□□□ -0.64
CCDC171-208ENST00000486641 SMYD2Q9NRG4 433 aa11.02□□□□□ -0.64
CCDC171-208ENST00000486641 ZNHIT2Q9UHR6 403 aa11.02□□□□□ -0.64
CCDC171-208ENST00000486641 HERC5Q9UII4 1024 aaKnown RBP11.02□□□□□ -0.64
CCDC171-208ENST00000486641 PADI4Q9UM07 663 aa11.02□□□□□ -0.64
CCDC171-208ENST00000486641 AGTPBP1Q9UPW5 1226 aa11.02□□□□□ -0.64
CCDC171-208ENST00000486641 TMEM247A6NEH6 219 aa11.02□□□□□ -0.65
CCDC171-208ENST00000486641 SERPINB7O75635 380 aa11.02□□□□□ -0.65
CCDC171-208ENST00000486641 UFL1O94874 794 aa11.02□□□□□ -0.65
CCDC171-208ENST00000486641 TFPTP0C1Z6 253 aa11.02□□□□□ -0.65
CCDC171-208ENST00000486641 ACO1P21399 889 aaKnown RBP11.02□□□□□ -0.65
CCDC171-208ENST00000486641 GNA15P30679 374 aa11.02□□□□□ -0.65
CCDC171-208ENST00000486641 HOXD12P35452 270 aa11.02□□□□□ -0.65
CCDC171-208ENST00000486641 RARRES1P49788 294 aa11.02□□□□□ -0.65
CCDC171-208ENST00000486641 RELAQ04206 551 aa11.02□□□□□ -0.65
CCDC171-208ENST00000486641 ADGRE1Q14246 886 aa11.02□□□□□ -0.65
CCDC171-208ENST00000486641 CYTH1Q15438 398 aa11.02□□□□□ -0.65
CCDC171-208ENST00000486641 CEP55Q53EZ4 464 aa11.02□□□□□ -0.65
CCDC171-208ENST00000486641 FASTKD1Q53R41 847 aaKnown RBP11.02□□□□□ -0.65
CCDC171-208ENST00000486641 TEDDM1Q5T9Z0 273 aa11.02□□□□□ -0.65
CCDC171-208ENST00000486641 VWA5B1Q5TIE3 1220 aa11.02□□□□□ -0.65
CCDC171-208ENST00000486641 GRAMD4Q6IC98 578 aa11.02□□□□□ -0.65
CCDC171-208ENST00000486641 TMEM270Q6UE05 265 aa11.02□□□□□ -0.65
CCDC171-208ENST00000486641 TRIM72Q6ZMU5 477 aa11.02□□□□□ -0.65
CCDC171-208ENST00000486641 SLC15A3Q8IY34 581 aa11.02□□□□□ -0.65
CCDC171-208ENST00000486641 ADGRF2Q8IZF7 708 aa11.02□□□□□ -0.65
CCDC171-208ENST00000486641 LILRA2Q8N149 483 aa11.02□□□□□ -0.65
CCDC171-208ENST00000486641 TRIML2Q8N7C3 387 aa11.02□□□□□ -0.65
CCDC171-208ENST00000486641 TSPAN14Q8NG11 270 aa11.02□□□□□ -0.65
CCDC171-208ENST00000486641 PPP1R14CQ8TAE6 165 aa11.02□□□□□ -0.65
CCDC171-208ENST00000486641 ZNF512Q96ME7 567 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms