RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 LSP1P33241 339 aa12.46□□□□□ -0.42
PKP4-213ENST00000486254 MAGEA4P43358 317 aa12.46□□□□□ -0.42
PKP4-213ENST00000486254 CLCNKBP51801 687 aa12.46□□□□□ -0.42
PKP4-213ENST00000486254 MAGOHP61326 146 aaKnown RBP12.46□□□□□ -0.42
PKP4-213ENST00000486254 GNGT1P63211 74 aa12.46□□□□□ -0.42
PKP4-213ENST00000486254 ATP11AP98196 1134 aa12.46□□□□□ -0.42
PKP4-213ENST00000486254 ADIGQ0VDE8 80 aa12.46□□□□□ -0.42
PKP4-213ENST00000486254 SCAPQ12770 1279 aa12.46□□□□□ -0.42
PKP4-213ENST00000486254 NR1H3Q13133 447 aa12.46□□□□□ -0.42
PKP4-213ENST00000486254 AUHQ13825 339 aaKnown RBP12.46□□□□□ -0.42
PKP4-213ENST00000486254 TAF5Q15542 800 aa12.46□□□□□ -0.42
PKP4-213ENST00000486254 CDO1Q16878 200 aa12.46□□□□□ -0.42
PKP4-213ENST00000486254 SH3PXD2AQ5TCZ1 1133 aa12.46□□□□□ -0.42
PKP4-213ENST00000486254 FAM171BQ6P995 826 aa12.46□□□□□ -0.42
PKP4-213ENST00000486254 LRRC31Q6UY01 552 aa12.46□□□□□ -0.42
PKP4-213ENST00000486254 PPP1R21Q6ZMI0 780 aa12.46□□□□□ -0.42
PKP4-213ENST00000486254 BZW1Q7L1Q6 419 aaKnown RBP12.46□□□□□ -0.42
PKP4-213ENST00000486254 CCDC25Q86WR0 208 aa12.46□□□□□ -0.42
PKP4-213ENST00000486254 ECHDC2Q86YB7 292 aa12.46□□□□□ -0.42
PKP4-213ENST00000486254 PQLC3Q8N755 202 aa12.46□□□□□ -0.42
PKP4-213ENST00000486254 NAT8LQ8N9F0 302 aa12.46□□□□□ -0.42
PKP4-213ENST00000486254 GLIS1Q8NBF1 620 aa12.46□□□□□ -0.42
PKP4-213ENST00000486254 SUSD3Q96L08 255 aa12.46□□□□□ -0.42
PKP4-213ENST00000486254 FAM118BQ9BPY3 351 aa12.46□□□□□ -0.42
PKP4-213ENST00000486254 POPDC2Q9HBU9 364 aa12.46□□□□□ -0.42
PKP4-213ENST00000486254 LRRC4Q9HBW1 653 aa12.46□□□□□ -0.42
PKP4-213ENST00000486254 RGS18Q9NS28 235 aa12.46□□□□□ -0.42
PKP4-213ENST00000486254 KRT82Q9NSB4 513 aa12.46□□□□□ -0.42
PKP4-213ENST00000486254 MIOSQ9NXC5 875 aa12.46□□□□□ -0.42
PKP4-213ENST00000486254 EURLQ9NYK6 297 aa12.46□□□□□ -0.42
PKP4-213ENST00000486254 PAK5Q9P286 719 aa12.46□□□□□ -0.42
PKP4-213ENST00000486254 NOVA2Q9UNW9 492 aaKnown RBP12.46□□□□□ -0.42
PKP4-213ENST00000486254 A0A087WUV0 522 aaPredicted RBP12.45□□□□□ -0.42
PKP4-213ENST00000486254 CHADO15335 359 aa12.45□□□□□ -0.42
PKP4-213ENST00000486254 GRAP2O75791 330 aa12.45□□□□□ -0.42
PKP4-213ENST00000486254 CTCFP49711 727 aaPredicted RBP12.45□□□□□ -0.42
PKP4-213ENST00000486254 VPS41P49754 854 aa12.45□□□□□ -0.42
PKP4-213ENST00000486254 BCAR1P56945 870 aa12.45□□□□□ -0.42
PKP4-213ENST00000486254 DYNLT1P63172 113 aa12.45□□□□□ -0.42
PKP4-213ENST00000486254 FAM189BP81408 668 aa12.45□□□□□ -0.42
PKP4-213ENST00000486254 HIF1AQ16665 826 aa12.45□□□□□ -0.42
PKP4-213ENST00000486254 MDH1BQ5I0G3 518 aa12.45□□□□□ -0.42
PKP4-213ENST00000486254 DCLRE1AQ6PJP8 1040 aa12.45□□□□□ -0.42
PKP4-213ENST00000486254 TRAF7Q6Q0C0 670 aa12.45□□□□□ -0.42
PKP4-213ENST00000486254 DSTYKQ6XUX3 929 aa12.45□□□□□ -0.42
PKP4-213ENST00000486254 METTL23Q86XA0 190 aa12.45□□□□□ -0.42
PKP4-213ENST00000486254 CDKL3Q8IVW4 592 aaPredicted RBP12.45□□□□□ -0.42
PKP4-213ENST00000486254 CNPY4Q8N129 248 aa12.45□□□□□ -0.42
PKP4-213ENST00000486254 SIX6OS1Q8N1H7 587 aa12.45□□□□□ -0.42
PKP4-213ENST00000486254 C3orf58Q8NDZ4 430 aa12.45□□□□□ -0.42
PKP4-213ENST00000486254 PCDH19Q8TAB3 1148 aa12.45□□□□□ -0.42
PKP4-213ENST00000486254 PKMYT1Q99640 499 aa12.45□□□□□ -0.42
PKP4-213ENST00000486254 ADAM2Q99965 735 aa12.45□□□□□ -0.42
PKP4-213ENST00000486254 FTHL17Q9BXU8 183 aa12.45□□□□□ -0.42
PKP4-213ENST00000486254 EPN3Q9H201 632 aa12.45□□□□□ -0.42
PKP4-213ENST00000486254 CENPHQ9H3R5 247 aa12.45□□□□□ -0.42
PKP4-213ENST00000486254 NRDE2Q9H7Z3 1164 aa12.45□□□□□ -0.42
PKP4-213ENST00000486254 MTMR10Q9NXD2 777 aa12.45□□□□□ -0.42
PKP4-213ENST00000486254 CALCOCO1Q9P1Z2 691 aa12.45□□□□□ -0.42
PKP4-213ENST00000486254 AP4E1Q9UPM8 1137 aa12.45□□□□□ -0.42
PKP4-213ENST00000486254 RAD54BQ9Y620 910 aa12.45□□□□□ -0.42
PKP4-213ENST00000486254 USP3Q9Y6I4 520 aa12.45□□□□□ -0.42
PKP4-213ENST00000486254 HACD1B0YJ81 288 aa12.44□□□□□ -0.42
PKP4-213ENST00000486254 E7EVH7 732 aa12.44□□□□□ -0.42
PKP4-213ENST00000486254 AOC2O75106 756 aa12.44□□□□□ -0.42
PKP4-213ENST00000486254 ACSL3O95573 720 aa12.44□□□□□ -0.42
PKP4-213ENST00000486254 IFNB1P01574 187 aa12.44□□□□□ -0.42
PKP4-213ENST00000486254 LCP1P13796 627 aa12.44□□□□□ -0.42
PKP4-213ENST00000486254 RPL22P35268 128 aaKnown RBP12.44□□□□□ -0.42
PKP4-213ENST00000486254 ARL4CP56559 192 aa12.44□□□□□ -0.42
PKP4-213ENST00000486254 DAOAP59103 153 aa12.44□□□□□ -0.42
PKP4-213ENST00000486254 DSC1Q08554 894 aa12.44□□□□□ -0.42
PKP4-213ENST00000486254 TIGD5Q53EQ6 642 aa12.44□□□□□ -0.42
PKP4-213ENST00000486254 INTS6LQ5JSJ4 861 aaKnown RBP12.44□□□□□ -0.42
PKP4-213ENST00000486254 KIAA0319Q5VV43 1072 aa12.44□□□□□ -0.42
PKP4-213ENST00000486254 SLC24A5Q71RS6 500 aa12.44□□□□□ -0.42
PKP4-213ENST00000486254 RAET1EQ8TD07 263 aa12.44□□□□□ -0.42
PKP4-213ENST00000486254 CPT1BQ92523 772 aa12.44□□□□□ -0.42
PKP4-213ENST00000486254 LPPQ93052 612 aa12.44□□□□□ -0.42
PKP4-213ENST00000486254 PCED1BQ96HM7 432 aa12.44□□□□□ -0.42
PKP4-213ENST00000486254 CCDC134Q9H6E4 229 aa12.44□□□□□ -0.42
PKP4-213ENST00000486254 USP29Q9HBJ7 922 aa12.44□□□□□ -0.42
PKP4-213ENST00000486254 PHF24Q9UPV7 400 aa12.44□□□□□ -0.42
PKP4-213ENST00000486254 HHLA1C9JL84 531 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 PIK3R2O00459 728 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 ATP2C2O75185 946 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 SPAG6O75602 509 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 F9P00740 461 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 CKBP12277 381 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 CYP2F1P24903 491 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 ARL4AP40617 200 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 HCAR3P49019 387 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 GDF10P55107 478 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 MMRN1Q13201 1228 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 KYNUQ16719 465 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 OTUD1Q5VV17 481 aaPredicted RBP12.43□□□□□ -0.42
PKP4-213ENST00000486254 PM20D1Q6GTS8 502 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 SCYL2Q6P3W7 929 aa12.43□□□□□ -0.42
PKP4-213ENST00000486254 SPATS2Q86XZ4 545 aaKnown RBP12.43□□□□□ -0.42
PKP4-213ENST00000486254 CLEC4CQ8WTT0 213 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms