RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 SLC14A1Q13336 389 aa13.78□□□□□ -0.2
HDAC6-227ENST00000485102 STK38Q15208 465 aa13.78□□□□□ -0.2
HDAC6-227ENST00000485102 ZNF667Q5HYK9 610 aa13.78□□□□□ -0.2
HDAC6-227ENST00000485102 KLHDC10Q6PID8 442 aa13.78□□□□□ -0.2
HDAC6-227ENST00000485102 HDDC3Q8N4P3 179 aa13.78□□□□□ -0.2
HDAC6-227ENST00000485102 NAT16Q8N8M0 369 aa13.78□□□□□ -0.2
HDAC6-227ENST00000485102 ZMIZ2Q8NF64 920 aa13.78□□□□□ -0.2
HDAC6-227ENST00000485102 PARD3BQ8TEW8 1205 aa13.78□□□□□ -0.2
HDAC6-227ENST00000485102 ZNF419Q96HQ0 510 aaPredicted RBP13.78□□□□□ -0.2
HDAC6-227ENST00000485102 GABRG3Q99928 467 aa13.78□□□□□ -0.2
HDAC6-227ENST00000485102 CYLDQ9NQC7 956 aa13.78□□□□□ -0.2
HDAC6-227ENST00000485102 DNAAF2Q9NVR5 837 aaKnown RBP13.78□□□□□ -0.2
HDAC6-227ENST00000485102 CALCOCO1Q9P1Z2 691 aa13.78□□□□□ -0.2
HDAC6-227ENST00000485102 WDR35Q9P2L0 1181 aa13.78□□□□□ -0.2
HDAC6-227ENST00000485102 MYH10P35580 1976 aa13.78□□□□□ -0.2
HDAC6-227ENST00000485102 CABIN1Q9Y6J0 2220 aa13.78□□□□□ -0.2
HDAC6-227ENST00000485102 IGHV1OR15-9A0A0B4J2B8 117 aa13.77□□□□□ -0.21
HDAC6-227ENST00000485102 ARHGAP33O14559 1287 aa13.77□□□□□ -0.21
HDAC6-227ENST00000485102 ZBTB24O43167 697 aaPredicted RBP13.77□□□□□ -0.21
HDAC6-227ENST00000485102 TLR5O60602 858 aa13.77□□□□□ -0.21
HDAC6-227ENST00000485102 HOXB2P14652 356 aa13.77□□□□□ -0.21
HDAC6-227ENST00000485102 RDXP35241 583 aaKnown RBP13.77□□□□□ -0.21
HDAC6-227ENST00000485102 MAPK8P45983 427 aa13.77□□□□□ -0.21
HDAC6-227ENST00000485102 ATXN3P54252 364 aaPredicted RBP13.77□□□□□ -0.21
HDAC6-227ENST00000485102 CDH8P55286 799 aa13.77□□□□□ -0.21
HDAC6-227ENST00000485102 RPL6Q02878 288 aaKnown RBP13.77□□□□□ -0.21
HDAC6-227ENST00000485102 IFRD2Q12894 506 aaPredicted RBP13.77□□□□□ -0.21
HDAC6-227ENST00000485102 KNOP1Q1ED39 458 aaKnown RBP13.77□□□□□ -0.21
HDAC6-227ENST00000485102 ANO4Q32M45 955 aa13.77□□□□□ -0.21
HDAC6-227ENST00000485102 C10orf76Q5T2E6 689 aa13.77□□□□□ -0.21
HDAC6-227ENST00000485102 ARMCX6Q7L4S7 300 aa13.77□□□□□ -0.21
HDAC6-227ENST00000485102 METTL3Q86U44 580 aaKnown RBP13.77□□□□□ -0.21
HDAC6-227ENST00000485102 UNC93AQ86WB7 457 aa13.77□□□□□ -0.21
HDAC6-227ENST00000485102 MIB1Q86YT6 1006 aa13.77□□□□□ -0.21
HDAC6-227ENST00000485102 SLC9A9Q8IVB4 645 aa13.77□□□□□ -0.21
HDAC6-227ENST00000485102 ZNF276Q8N554 614 aa13.77□□□□□ -0.21
HDAC6-227ENST00000485102 GOLGA5Q8TBA6 731 aa13.77□□□□□ -0.21
HDAC6-227ENST00000485102 PLEKHO2Q8TD55 490 aa13.77□□□□□ -0.21
HDAC6-227ENST00000485102 WBP2Q969T9 261 aa13.77□□□□□ -0.21
HDAC6-227ENST00000485102 XPO6Q96QU8 1125 aaKnown RBP13.77□□□□□ -0.21
HDAC6-227ENST00000485102 SMOQ99835 787 aa13.77□□□□□ -0.21
HDAC6-227ENST00000485102 KLF16Q9BXK1 252 aaPredicted RBP13.77□□□□□ -0.21
HDAC6-227ENST00000485102 SMYD3Q9H7B4 428 aa13.77□□□□□ -0.21
HDAC6-227ENST00000485102 ZDHHC4Q9NPG8 344 aa13.77□□□□□ -0.21
HDAC6-227ENST00000485102 TLR8Q9NR97 1041 aaKnown RBP13.77□□□□□ -0.21
HDAC6-227ENST00000485102 DMAC2Q9NW81 257 aa13.77□□□□□ -0.21
HDAC6-227ENST00000485102 GMIPQ9P107 970 aa13.77□□□□□ -0.21
HDAC6-227ENST00000485102 TFIP11Q9UBB9 837 aaKnown RBP13.77□□□□□ -0.21
HDAC6-227ENST00000485102 FBXO10Q9UK96 956 aa13.77□□□□□ -0.21
HDAC6-227ENST00000485102 RALYQ9UKM9 306 aaKnown RBP13.77□□□□□ -0.21
HDAC6-227ENST00000485102 CIZ1Q9ULV3 898 aaPredicted RBP13.77□□□□□ -0.21
HDAC6-227ENST00000485102 NFE2L3Q9Y4A8 694 aa13.77□□□□□ -0.21
HDAC6-227ENST00000485102 ADAMTS9Q9P2N4 1935 aa13.76□□□□□ -0.21
HDAC6-227ENST00000485102 STX6O43752 255 aa13.76□□□□□ -0.21
HDAC6-227ENST00000485102 HYAL3O43820 417 aaPredicted RBP13.76□□□□□ -0.21
HDAC6-227ENST00000485102 EXOC3O60645 756 aa13.76□□□□□ -0.21
HDAC6-227ENST00000485102 CUTAO60888 179 aa13.76□□□□□ -0.21
HDAC6-227ENST00000485102 OPHN1O60890 802 aa13.76□□□□□ -0.21
HDAC6-227ENST00000485102 PHACTR2O75167 634 aa13.76□□□□□ -0.21
HDAC6-227ENST00000485102 GJB3O75712 270 aa13.76□□□□□ -0.21
HDAC6-227ENST00000485102 AP1G2O75843 785 aa13.76□□□□□ -0.21
HDAC6-227ENST00000485102 YEATS4O95619 227 aa13.76□□□□□ -0.21
HDAC6-227ENST00000485102 CAPNS1P04632 268 aa13.76□□□□□ -0.21
HDAC6-227ENST00000485102 RPN1P04843 607 aaKnown RBP13.76□□□□□ -0.21
HDAC6-227ENST00000485102 CFIP05156 583 aa13.76□□□□□ -0.21
HDAC6-227ENST00000485102 SYPP08247 313 aa13.76□□□□□ -0.21
HDAC6-227ENST00000485102 CD59P13987 128 aa13.76□□□□□ -0.21
HDAC6-227ENST00000485102 ATP5C1P36542 298 aaKnown RBP13.76□□□□□ -0.21
HDAC6-227ENST00000485102 ZNF132P52740 706 aa13.76□□□□□ -0.21
HDAC6-227ENST00000485102 SIM1P81133 766 aaPredicted RBP13.76□□□□□ -0.21
HDAC6-227ENST00000485102 NCOA4Q13772 614 aa13.76□□□□□ -0.21
HDAC6-227ENST00000485102 ZNF423Q2M1K9 1284 aa13.76□□□□□ -0.21
HDAC6-227ENST00000485102 SGSM1Q2NKQ1 1148 aa13.76□□□□□ -0.21
HDAC6-227ENST00000485102 ZNF699Q32M78 642 aa13.76□□□□□ -0.21
HDAC6-227ENST00000485102 GRAMD4Q6IC98 578 aa13.76□□□□□ -0.21
HDAC6-227ENST00000485102 SDE2Q6IQ49 451 aa13.76□□□□□ -0.21
HDAC6-227ENST00000485102 SHC4Q6S5L8 630 aa13.76□□□□□ -0.21
HDAC6-227ENST00000485102 SLC41A1Q8IVJ1 513 aa13.76□□□□□ -0.21
HDAC6-227ENST00000485102 NELFCDQ8IXH7 590 aa13.76□□□□□ -0.21
HDAC6-227ENST00000485102 IPO4Q8TEX9 1081 aaKnown RBP13.76□□□□□ -0.21
HDAC6-227ENST00000485102 TAF4BQ92750 862 aa13.76□□□□□ -0.21
HDAC6-227ENST00000485102 DHX58Q96C10 678 aa13.76□□□□□ -0.21
HDAC6-227ENST00000485102 MED10Q9BTT4 135 aa13.76□□□□□ -0.21
HDAC6-227ENST00000485102 FAM124BQ9H5Z6 455 aaPredicted RBP13.76□□□□□ -0.21
HDAC6-227ENST00000485102 PNPLA8Q9NP80 782 aa13.76□□□□□ -0.21
HDAC6-227ENST00000485102 SCML2Q9UQR0 700 aa13.76□□□□□ -0.21
HDAC6-227ENST00000485102 SPAARA0A1B0GVQ0 90 aa13.75□□□□□ -0.21
HDAC6-227ENST00000485102 TRIM24O15164 1050 aa13.75□□□□□ -0.21
HDAC6-227ENST00000485102 VNN1O95497 513 aa13.75□□□□□ -0.21
HDAC6-227ENST00000485102 CISD3P0C7P0 127 aa13.75□□□□□ -0.21
HDAC6-227ENST00000485102 P4HA1P13674 534 aa13.75□□□□□ -0.21
HDAC6-227ENST00000485102 TYRP14679 529 aa13.75□□□□□ -0.21
HDAC6-227ENST00000485102 NDUFV2P19404 249 aa13.75□□□□□ -0.21
HDAC6-227ENST00000485102 CASP4P49662 377 aa13.75□□□□□ -0.21
HDAC6-227ENST00000485102 PGFP49763 221 aa13.75□□□□□ -0.21
HDAC6-227ENST00000485102 GOLGA8FQ08AF8 430 aa13.75□□□□□ -0.21
HDAC6-227ENST00000485102 GOLGA8DPQ0D2H9 430 aa13.75□□□□□ -0.21
HDAC6-227ENST00000485102 BIRC3Q13489 604 aa13.75□□□□□ -0.21
HDAC6-227ENST00000485102 ZACNQ401N2 412 aa13.75□□□□□ -0.21
HDAC6-227ENST00000485102 EGFLAMQ63HQ2 1017 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms