RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 POPDC2Q9HBU9 364 aa17.43■□□□□ 0.38
CTSA-207ENST00000484855 STAP1Q9ULZ2 295 aa17.43■□□□□ 0.38
CTSA-207ENST00000484855 MYO16Q9Y6X6 1858 aa17.42■□□□□ 0.38
CTSA-207ENST00000484855 HHLA1C9JL84 531 aa17.42■□□□□ 0.38
CTSA-207ENST00000484855 SGK1O00141 431 aa17.42■□□□□ 0.38
CTSA-207ENST00000484855 PMS2P54278 862 aa17.42■□□□□ 0.38
CTSA-207ENST00000484855 CAV1Q03135 178 aa17.42■□□□□ 0.38
CTSA-207ENST00000484855 LRIG3Q6UXM1 1119 aa17.42■□□□□ 0.38
CTSA-207ENST00000484855 HFE2Q6ZVN8 426 aa17.42■□□□□ 0.38
CTSA-207ENST00000484855 PRUNE1Q86TP1 453 aa17.42■□□□□ 0.38
CTSA-207ENST00000484855 LRRTM3Q86VH5 581 aa17.42■□□□□ 0.38
CTSA-207ENST00000484855 VSIG1Q86XK7 387 aa17.42■□□□□ 0.38
CTSA-207ENST00000484855 RNF157Q96PX1 679 aa17.42■□□□□ 0.38
CTSA-207ENST00000484855 ZNF670Q9BS34 389 aa17.42■□□□□ 0.38
CTSA-207ENST00000484855 DMAP1Q9NPF5 467 aaPredicted RBP17.42■□□□□ 0.38
CTSA-207ENST00000484855 AP4E1Q9UPM8 1137 aa17.42■□□□□ 0.38
CTSA-207ENST00000484855 ZNF638Q14966 1978 aaKnown RBP17.42■□□□□ 0.38
CTSA-207ENST00000484855 NRP1O14786 923 aa17.42■□□□□ 0.38
CTSA-207ENST00000484855 MCF2LO15068 1137 aa17.42■□□□□ 0.38
CTSA-207ENST00000484855 TP73O15350 636 aa17.42■□□□□ 0.38
CTSA-207ENST00000484855 TRAPPC3O43617 180 aa17.42■□□□□ 0.38
CTSA-207ENST00000484855 USP17L7P0C7H9 530 aa17.42■□□□□ 0.38
CTSA-207ENST00000484855 PECAM1P16284 738 aaPredicted RBP17.42■□□□□ 0.38
CTSA-207ENST00000484855 TCTN1Q2MV58 587 aa17.42■□□□□ 0.38
CTSA-207ENST00000484855 PPP6R3Q5H9R7 873 aaPredicted RBP17.42■□□□□ 0.38
CTSA-207ENST00000484855 IZUMO3Q5VZ72 239 aa17.42■□□□□ 0.38
CTSA-207ENST00000484855 SLC39A5Q6ZMH5 540 aa17.42■□□□□ 0.38
CTSA-207ENST00000484855 FAM43BQ6ZT52 329 aaPredicted RBP17.42■□□□□ 0.38
CTSA-207ENST00000484855 ANKRD33Q7Z3H0 272 aa17.42■□□□□ 0.38
CTSA-207ENST00000484855 CCDC185Q8N715 623 aa17.42■□□□□ 0.38
CTSA-207ENST00000484855 GLIS1Q8NBF1 620 aa17.42■□□□□ 0.38
CTSA-207ENST00000484855 CALCOCO1Q9P1Z2 691 aa17.42■□□□□ 0.38
CTSA-207ENST00000484855 ANAPC5Q9UJX4 755 aa17.42■□□□□ 0.38
CTSA-207ENST00000484855 GOLGA8KD6RF30 607 aa17.41■□□□□ 0.38
CTSA-207ENST00000484855 TADA2AO75478 443 aa17.41■□□□□ 0.38
CTSA-207ENST00000484855 GATMP50440 423 aa17.41■□□□□ 0.38
CTSA-207ENST00000484855 CCL23P55773 120 aa17.41■□□□□ 0.38
CTSA-207ENST00000484855 SLMAPQ14BN4 828 aa17.41■□□□□ 0.38
CTSA-207ENST00000484855 DPYSL2Q16555 572 aa17.41■□□□□ 0.38
CTSA-207ENST00000484855 ANKRD20A8PQ5CZ79 823 aa17.41■□□□□ 0.38
CTSA-207ENST00000484855 OTUD1Q5VV17 481 aaPredicted RBP17.41■□□□□ 0.38
CTSA-207ENST00000484855 RHBDF2Q6PJF5 856 aa17.41■□□□□ 0.38
CTSA-207ENST00000484855 CASD1Q96PB1 797 aa17.41■□□□□ 0.38
CTSA-207ENST00000484855 NPY6RQ99463 290 aa17.41■□□□□ 0.38
CTSA-207ENST00000484855 PPP1R12CQ9BZL4 782 aa17.41■□□□□ 0.38
CTSA-207ENST00000484855 DHX35Q9H5Z1 703 aaKnown RBP17.41■□□□□ 0.38
CTSA-207ENST00000484855 YJEFN3A6XGL0 299 aa17.4■□□□□ 0.38
CTSA-207ENST00000484855 DCDC2CA8MYV0 355 aa17.4■□□□□ 0.38
CTSA-207ENST00000484855 E7ENQ6 273 aa17.4■□□□□ 0.38
CTSA-207ENST00000484855 APOL1O14791 398 aa17.4■□□□□ 0.38
CTSA-207ENST00000484855 CAPN9O14815 690 aa17.4■□□□□ 0.38
CTSA-207ENST00000484855 ZBED1O96006 694 aa17.4■□□□□ 0.38
CTSA-207ENST00000484855 IL4RP24394 825 aa17.4■□□□□ 0.38
CTSA-207ENST00000484855 EIF3EP60228 445 aaKnown RBP17.4■□□□□ 0.38
CTSA-207ENST00000484855 GABPB1Q06547 395 aaPredicted RBP17.4■□□□□ 0.38
CTSA-207ENST00000484855 P3H1Q32P28 736 aa17.4■□□□□ 0.38
CTSA-207ENST00000484855 NPNTQ6UXI9 565 aa17.4■□□□□ 0.38
CTSA-207ENST00000484855 C4orf50Q6ZRC1 276 aa17.4■□□□□ 0.38
CTSA-207ENST00000484855 CCDC25Q86WR0 208 aa17.4■□□□□ 0.38
CTSA-207ENST00000484855 FAM131BQ86XD5 332 aa17.4■□□□□ 0.38
CTSA-207ENST00000484855 SPATA2LQ8IUW3 424 aaPredicted RBP17.4■□□□□ 0.38
CTSA-207ENST00000484855 P3H4Q92791 437 aa17.4■□□□□ 0.38
CTSA-207ENST00000484855 NT5C3BQ969T7 300 aa17.4■□□□□ 0.38
CTSA-207ENST00000484855 NRDE2Q9H7Z3 1164 aa17.4■□□□□ 0.38
CTSA-207ENST00000484855 PCDH9Q9HC56 1237 aa17.4■□□□□ 0.38
CTSA-207ENST00000484855 SYNJ2BP-COX16A0A087WUM0 186 aa17.4■□□□□ 0.38
CTSA-207ENST00000484855 ZNF487B1APH4 448 aa17.4■□□□□ 0.38
CTSA-207ENST00000484855 H0YGN5 161 aa17.4■□□□□ 0.38
CTSA-207ENST00000484855 M0QYT0 321 aa17.4■□□□□ 0.38
CTSA-207ENST00000484855 IFNB1P01574 187 aa17.4■□□□□ 0.38
CTSA-207ENST00000484855 ZSCAN5DPP0CG00 497 aa17.4■□□□□ 0.38
CTSA-207ENST00000484855 ETS1P14921 441 aa17.4■□□□□ 0.38
CTSA-207ENST00000484855 L1CAMP32004 1257 aa17.4■□□□□ 0.38
CTSA-207ENST00000484855 RDXP35241 583 aaKnown RBP17.4■□□□□ 0.38
CTSA-207ENST00000484855 BCAR1P56945 870 aa17.4■□□□□ 0.38
CTSA-207ENST00000484855 PITX1P78337 314 aaPredicted RBP17.4■□□□□ 0.38
CTSA-207ENST00000484855 NOMO1Q15155 1222 aa17.4■□□□□ 0.38
CTSA-207ENST00000484855 CEP85LQ5SZL2 805 aa17.4■□□□□ 0.38
CTSA-207ENST00000484855 SYPL2Q5VXT5 272 aa17.4■□□□□ 0.38
CTSA-207ENST00000484855 RSAD2Q8WXG1 361 aa17.4■□□□□ 0.38
CTSA-207ENST00000484855 FAF2Q96CS3 445 aa17.4■□□□□ 0.38
CTSA-207ENST00000484855 PABPC3Q9H361 631 aaKnown RBP17.4■□□□□ 0.38
CTSA-207ENST00000484855 COX16Q9P0S2 106 aa17.4■□□□□ 0.38
CTSA-207ENST00000484855 NAALADL1Q9UQQ1 740 aa17.4■□□□□ 0.38
CTSA-207ENST00000484855 NFS1Q9Y697 457 aa17.4■□□□□ 0.38
CTSA-207ENST00000484855 HOXA2O43364 376 aa17.39■□□□□ 0.37
CTSA-207ENST00000484855 LTFP02788 710 aa17.39■□□□□ 0.37
CTSA-207ENST00000484855 TGM2P21980 687 aa17.39■□□□□ 0.37
CTSA-207ENST00000484855 GYS2P54840 703 aa17.39■□□□□ 0.37
CTSA-207ENST00000484855 DEUP1Q05D60 604 aa17.39■□□□□ 0.37
CTSA-207ENST00000484855 FAAP100Q0VG06 881 aa17.39■□□□□ 0.37
CTSA-207ENST00000484855 GPS1Q13098 491 aa17.39■□□□□ 0.37
CTSA-207ENST00000484855 TRIM60Q495X7 471 aa17.39■□□□□ 0.37
CTSA-207ENST00000484855 C1orf228Q6PIY5 440 aa17.39■□□□□ 0.37
CTSA-207ENST00000484855 BNIPLQ7Z465 357 aa17.39■□□□□ 0.37
CTSA-207ENST00000484855 CTU1Q7Z7A3 348 aaKnown RBP17.39■□□□□ 0.37
CTSA-207ENST00000484855 PQLC3Q8N755 202 aa17.39■□□□□ 0.37
CTSA-207ENST00000484855 OR2W6PQ8NHA6 318 aa17.39■□□□□ 0.37
CTSA-207ENST00000484855 PCDH19Q8TAB3 1148 aa17.39■□□□□ 0.37
CTSA-207ENST00000484855 KCTD15Q96SI1 283 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms