RNA–Protein interactions for RNA: ENST00000484378.1

HLA-C-207, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 862 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-207ENST00000484378 HOOK1Q9UJC3 728 aaKnown RBP29.93■■■□□ 2.38
HLA-C-207ENST00000484378 A0A1W2PQH9 124 aa29.92■■■□□ 2.38
HLA-C-207ENST00000484378 DCLK1O15075 740 aa29.92■■■□□ 2.38
HLA-C-207ENST00000484378 KLF8O95600 359 aaPredicted RBP29.92■■■□□ 2.38
HLA-C-207ENST00000484378 FKBP3Q00688 224 aaKnown RBP29.92■■■□□ 2.38
HLA-C-207ENST00000484378 CRY1Q16526 586 aa29.92■■■□□ 2.38
HLA-C-207ENST00000484378 AASDHQ4L235 1098 aaPredicted RBP29.92■■■□□ 2.38
HLA-C-207ENST00000484378 NAT16Q8N8M0 369 aa29.92■■■□□ 2.38
HLA-C-207ENST00000484378 C12orf50Q8NA57 414 aaPredicted RBP29.92■■■□□ 2.38
HLA-C-207ENST00000484378 ARID3AQ99856 593 aa29.92■■■□□ 2.38
HLA-C-207ENST00000484378 KLF16Q9BXK1 252 aaPredicted RBP29.92■■■□□ 2.38
HLA-C-207ENST00000484378 TPSD1Q9BZJ3 242 aa29.92■■■□□ 2.38
HLA-C-207ENST00000484378 NMUR1Q9HB89 426 aa29.92■■■□□ 2.38
HLA-C-207ENST00000484378 LSM7Q9UK45 103 aaKnown RBP29.92■■■□□ 2.38
HLA-C-207ENST00000484378 PCDHGA5Q9Y5G8 931 aa29.92■■■□□ 2.38
HLA-C-207ENST00000484378 DCDC2BA2VCK2 349 aa29.91■■■□□ 2.38
HLA-C-207ENST00000484378 SLC30A4O14863 429 aa29.91■■■□□ 2.38
HLA-C-207ENST00000484378 GDF9O60383 454 aa29.91■■■□□ 2.38
HLA-C-207ENST00000484378 RARGP13631 454 aa29.91■■■□□ 2.38
HLA-C-207ENST00000484378 KIF11P52732 1056 aa29.91■■■□□ 2.38
HLA-C-207ENST00000484378 SF3A2Q15428 464 aaKnown RBP29.91■■■□□ 2.38
HLA-C-207ENST00000484378 HSF5Q4G112 596 aaPredicted RBP29.91■■■□□ 2.38
HLA-C-207ENST00000484378 PREPLQ4J6C6 727 aaPredicted RBP29.91■■■□□ 2.38
HLA-C-207ENST00000484378 ANKRD40Q6AI12 368 aa29.91■■■□□ 2.38
HLA-C-207ENST00000484378 HTR3DQ70Z44 454 aa29.91■■■□□ 2.38
HLA-C-207ENST00000484378 TTC30AQ86WT1 665 aa29.91■■■□□ 2.38
HLA-C-207ENST00000484378 TMEM25Q86YD3 366 aa29.91■■■□□ 2.38
HLA-C-207ENST00000484378 ETFBKMTQ8IXQ9 262 aa29.91■■■□□ 2.38
HLA-C-207ENST00000484378 IL17RCQ8NAC3 791 aa29.91■■■□□ 2.38
HLA-C-207ENST00000484378 TXNDC5Q8NBS9 432 aaKnown RBP29.91■■■□□ 2.38
HLA-C-207ENST00000484378 CNOT6LQ96LI5 555 aaKnown RBP29.91■■■□□ 2.38
HLA-C-207ENST00000484378 GTPBP4Q9BZE4 634 aaKnown RBP29.91■■■□□ 2.38
HLA-C-207ENST00000484378 DUSP15Q9H1R2 295 aaPredicted RBP29.91■■■□□ 2.38
HLA-C-207ENST00000484378 DEC1Q9P2X7 70 aa29.91■■■□□ 2.38
HLA-C-207ENST00000484378 NAGPAQ9UK23 515 aa29.91■■■□□ 2.38
HLA-C-207ENST00000484378 TULP3O75386 442 aa29.9■■■□□ 2.38
HLA-C-207ENST00000484378 RHOBTB1O94844 696 aa29.9■■■□□ 2.38
HLA-C-207ENST00000484378 GBP1P32455 592 aa29.9■■■□□ 2.38
HLA-C-207ENST00000484378 TNFRSF4P43489 277 aa29.9■■■□□ 2.38
HLA-C-207ENST00000484378 PMS1P54277 932 aaKnown RBP29.9■■■□□ 2.38
HLA-C-207ENST00000484378 LRRC63Q05C16 580 aa29.9■■■□□ 2.38
HLA-C-207ENST00000484378 CBWD6Q4V339 395 aa29.9■■■□□ 2.38
HLA-C-207ENST00000484378 USP39Q53GS9 565 aaKnown RBP29.9■■■□□ 2.38
HLA-C-207ENST00000484378 CBWD3Q5JTY5 395 aa29.9■■■□□ 2.38
HLA-C-207ENST00000484378 CBWD5Q5RIA9 395 aa29.9■■■□□ 2.38
HLA-C-207ENST00000484378 C10orf120Q5SQS8 335 aa29.9■■■□□ 2.38
HLA-C-207ENST00000484378 CCDC186Q7Z3E2 898 aa29.9■■■□□ 2.38
HLA-C-207ENST00000484378 RASSF3Q86WH2 238 aa29.9■■■□□ 2.38
HLA-C-207ENST00000484378 ZC3H3Q8IXZ2 948 aaKnown RBP29.9■■■□□ 2.38
HLA-C-207ENST00000484378 PHTF2Q8N3S3 785 aa29.9■■■□□ 2.38
HLA-C-207ENST00000484378 SLC4A11Q8NBS3 891 aa29.9■■■□□ 2.38
HLA-C-207ENST00000484378 SPATA20Q8TB22 786 aa29.9■■■□□ 2.38
HLA-C-207ENST00000484378 TMEM176AQ96HP8 235 aa29.9■■■□□ 2.38
HLA-C-207ENST00000484378 MTPAPQ9NVV4 582 aaKnown RBP eCLIP29.9■■■□□ 2.38
HLA-C-207ENST00000484378 NUDT5Q9UKK9 219 aa29.9■■■□□ 2.38
HLA-C-207ENST00000484378 SPTBN2O15020 2390 aa29.9■■■□□ 2.38
HLA-C-207ENST00000484378 A0A0A0MRY4 1105 aa29.89■■■□□ 2.38
HLA-C-207ENST00000484378 TBC1D3BA6NDS4 549 aa29.89■■■□□ 2.38
HLA-C-207ENST00000484378 MDM4O15151 490 aa29.89■■■□□ 2.38
HLA-C-207ENST00000484378 ALDH1A2O94788 518 aa29.89■■■□□ 2.38
HLA-C-207ENST00000484378 ZNF806P0C7X5 589 aa29.89■■■□□ 2.38
HLA-C-207ENST00000484378 MPLP40238 635 aa29.89■■■□□ 2.38
HLA-C-207ENST00000484378 KIR2DL1P43626 348 aaPredicted RBP29.89■■■□□ 2.38
HLA-C-207ENST00000484378 PSEN1P49768 467 aa29.89■■■□□ 2.38
HLA-C-207ENST00000484378 EOGTQ5NDL2 527 aa29.89■■■□□ 2.38
HLA-C-207ENST00000484378 EMC10Q5UCC4 262 aa29.89■■■□□ 2.38
HLA-C-207ENST00000484378 KLHDC10Q6PID8 442 aa29.89■■■□□ 2.38
HLA-C-207ENST00000484378 TADA2BQ86TJ2 420 aa29.89■■■□□ 2.38
HLA-C-207ENST00000484378 MDGA1Q8NFP4 955 aa29.89■■■□□ 2.38
HLA-C-207ENST00000484378 TATDN2Q93075 761 aa29.89■■■□□ 2.38
HLA-C-207ENST00000484378 TIGD1Q96MW7 591 aa29.89■■■□□ 2.38
HLA-C-207ENST00000484378 FAM124BQ9H5Z6 455 aaPredicted RBP29.89■■■□□ 2.38
HLA-C-207ENST00000484378 DNMT3LQ9UJW3 386 aa29.89■■■□□ 2.38
HLA-C-207ENST00000484378 INVSQ9Y283 1065 aa29.89■■■□□ 2.38
HLA-C-207ENST00000484378 TRIM49BA6NDI0 452 aa29.88■■■□□ 2.37
HLA-C-207ENST00000484378 SGK1O00141 431 aa29.88■■■□□ 2.37
HLA-C-207ENST00000484378 GREM1O60565 184 aa29.88■■■□□ 2.37
HLA-C-207ENST00000484378 CHRM1P11229 460 aaPredicted RBP29.88■■■□□ 2.37
HLA-C-207ENST00000484378 RAD23BP54727 409 aa29.88■■■□□ 2.37
HLA-C-207ENST00000484378 STIM1Q13586 685 aa29.88■■■□□ 2.37
HLA-C-207ENST00000484378 TMEM92Q6UXU6 159 aa29.88■■■□□ 2.37
HLA-C-207ENST00000484378 NUDT18Q6ZVK8 323 aa29.88■■■□□ 2.37
HLA-C-207ENST00000484378 C11orf74Q86VG3 221 aa29.88■■■□□ 2.37
HLA-C-207ENST00000484378 ZDHHC4Q9NPG8 344 aa29.88■■■□□ 2.37
HLA-C-207ENST00000484378 ARMCX3Q9UH62 379 aaPredicted RBP29.88■■■□□ 2.37
HLA-C-207ENST00000484378 NEDD8-MDP1E9PL57 170 aa29.87■■■□□ 2.37
HLA-C-207ENST00000484378 HNRNPLP14866 589 aaKnown RBP eCLIP29.87■■■□□ 2.37
HLA-C-207ENST00000484378 SCD5Q86SK9 330 aa29.87■■■□□ 2.37
HLA-C-207ENST00000484378 TERB1Q8NA31 727 aa29.87■■■□□ 2.37
HLA-C-207ENST00000484378 BBS2Q9BXC9 721 aa29.87■■■□□ 2.37
HLA-C-207ENST00000484378 POLMQ9NP87 494 aaPredicted RBP29.87■■■□□ 2.37
HLA-C-207ENST00000484378 USP3Q9Y6I4 520 aa29.87■■■□□ 2.37
HLA-C-207ENST00000484378 PSMA7O14818 248 aa29.86■■■□□ 2.37
HLA-C-207ENST00000484378 RALAP11233 206 aa29.86■■■□□ 2.37
HLA-C-207ENST00000484378 PLA2G4AP47712 749 aa29.86■■■□□ 2.37
HLA-C-207ENST00000484378 SLC8A3P57103 927 aa29.86■■■□□ 2.37
HLA-C-207ENST00000484378 PLA2G2CQ5R387 149 aa29.86■■■□□ 2.37
HLA-C-207ENST00000484378 C10orf76Q5T2E6 689 aa29.86■■■□□ 2.37
HLA-C-207ENST00000484378 ARHGAP17Q68EM7 881 aa29.86■■■□□ 2.37
HLA-C-207ENST00000484378 MIB1Q86YT6 1006 aa29.86■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms