RNA–Protein interactions for RNA: ENST00000484101.5

UFD1-208, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 751 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-208ENST00000484101 ARIH1Q9Y4X5 557 aaPredicted RBP10.05□□□□□ -0.8
UFD1-208ENST00000484101 COL4A4P53420 1690 aaPredicted RBP10.05□□□□□ -0.8
UFD1-208ENST00000484101 PTPRDP23468 1912 aa10.04□□□□□ -0.8
UFD1-208ENST00000484101 HACD1B0YJ81 288 aa10.04□□□□□ -0.8
UFD1-208ENST00000484101 C9IYK1 514 aa10.04□□□□□ -0.8
UFD1-208ENST00000484101 RASGRF2O14827 1237 aa10.04□□□□□ -0.8
UFD1-208ENST00000484101 CCDC130P13994 396 aa10.04□□□□□ -0.8
UFD1-208ENST00000484101 CCND3P30281 292 aaPredicted RBP10.04□□□□□ -0.8
UFD1-208ENST00000484101 NOS2P35228 1153 aa10.04□□□□□ -0.8
UFD1-208ENST00000484101 ACLYP53396 1101 aa10.04□□□□□ -0.8
UFD1-208ENST00000484101 EIF3EP60228 445 aaKnown RBP10.04□□□□□ -0.8
UFD1-208ENST00000484101 MRPS5P82675 430 aaKnown RBP10.04□□□□□ -0.8
UFD1-208ENST00000484101 GPS1Q13098 491 aa10.04□□□□□ -0.8
UFD1-208ENST00000484101 SLC29A2Q14542 456 aa10.04□□□□□ -0.8
UFD1-208ENST00000484101 LPIN1Q14693 890 aa10.04□□□□□ -0.8
UFD1-208ENST00000484101 RASA2Q15283 850 aa10.04□□□□□ -0.8
UFD1-208ENST00000484101 UPP1Q16831 310 aa10.04□□□□□ -0.8
UFD1-208ENST00000484101 TRIM71Q2Q1W2 868 aaKnown RBP10.04□□□□□ -0.8
UFD1-208ENST00000484101 SLC25A52Q3SY17 297 aa10.04□□□□□ -0.8
UFD1-208ENST00000484101 RNASEH2BQ5TBB1 312 aaKnown RBP10.04□□□□□ -0.8
UFD1-208ENST00000484101 WSCD1Q658N2 575 aa10.04□□□□□ -0.8
UFD1-208ENST00000484101 TXNRD3NBQ6F5E7 133 aa10.04□□□□□ -0.8
UFD1-208ENST00000484101 AGMOQ6ZNB7 445 aa10.04□□□□□ -0.8
UFD1-208ENST00000484101 CYP4V2Q6ZWL3 525 aaPredicted RBP10.04□□□□□ -0.8
UFD1-208ENST00000484101 BEND5Q7L4P6 421 aa10.04□□□□□ -0.8
UFD1-208ENST00000484101 OSTM1Q86WC4 334 aa10.04□□□□□ -0.8
UFD1-208ENST00000484101 CCDC25Q86WR0 208 aa10.04□□□□□ -0.8
UFD1-208ENST00000484101 SPATS2Q86XZ4 545 aaKnown RBP10.04□□□□□ -0.8
UFD1-208ENST00000484101 C7orf61Q8IZ16 206 aa10.04□□□□□ -0.8
UFD1-208ENST00000484101 FUKQ8N0W3 1084 aa10.04□□□□□ -0.8
UFD1-208ENST00000484101 GSTCDQ8NEC7 633 aa10.04□□□□□ -0.8
UFD1-208ENST00000484101 MYCBPAPQ8TBZ2 947 aa10.04□□□□□ -0.8
UFD1-208ENST00000484101 URGCPQ8TCY9 931 aa10.04□□□□□ -0.8
UFD1-208ENST00000484101 CENPTQ96BT3 561 aa10.04□□□□□ -0.8
UFD1-208ENST00000484101 ACBD6Q9BR61 282 aa10.04□□□□□ -0.8
UFD1-208ENST00000484101 UBE2OQ9C0C9 1292 aaKnown RBP10.04□□□□□ -0.8
UFD1-208ENST00000484101 CALCOCO1Q9P1Z2 691 aa10.04□□□□□ -0.8
UFD1-208ENST00000484101 PAK5Q9P286 719 aa10.04□□□□□ -0.8
UFD1-208ENST00000484101 KANSL3Q9P2N6 904 aa10.04□□□□□ -0.8
UFD1-208ENST00000484101 PCSK1NQ9UHG2 260 aa10.04□□□□□ -0.8
UFD1-208ENST00000484101 NME7Q9Y5B8 376 aa10.04□□□□□ -0.8
UFD1-208ENST00000484101 ACTL7BQ9Y614 415 aa10.04□□□□□ -0.8
UFD1-208ENST00000484101 RAD54BQ9Y620 910 aa10.04□□□□□ -0.8
UFD1-208ENST00000484101 A0A087WUV0 522 aaPredicted RBP10.03□□□□□ -0.8
UFD1-208ENST00000484101 BCLAF3A2AJT9 711 aaKnown RBP10.03□□□□□ -0.8
UFD1-208ENST00000484101 TMEM189-UBE2V1I3L0A0 370 aa10.03□□□□□ -0.8
UFD1-208ENST00000484101 M0QZQ0 153 aa10.03□□□□□ -0.8
UFD1-208ENST00000484101 TP73O15350 636 aa10.03□□□□□ -0.8
UFD1-208ENST00000484101 CDH16O75309 829 aa10.03□□□□□ -0.8
UFD1-208ENST00000484101 SPAG6O75602 509 aa10.03□□□□□ -0.8
UFD1-208ENST00000484101 F9P00740 461 aa10.03□□□□□ -0.8
UFD1-208ENST00000484101 PDGFRBP09619 1106 aa10.03□□□□□ -0.8
UFD1-208ENST00000484101 RBP3P10745 1247 aa10.03□□□□□ -0.8
UFD1-208ENST00000484101 GHRP10912 638 aa10.03□□□□□ -0.8
UFD1-208ENST00000484101 ATP2A2P16615 1042 aaKnown RBP10.03□□□□□ -0.8
UFD1-208ENST00000484101 SYN1P17600 705 aa10.03□□□□□ -0.8
UFD1-208ENST00000484101 LMO2P25791 158 aa10.03□□□□□ -0.8
UFD1-208ENST00000484101 CD52P31358 61 aa10.03□□□□□ -0.8
UFD1-208ENST00000484101 PHBP35232 272 aa10.03□□□□□ -0.8
UFD1-208ENST00000484101 ARL4AP40617 200 aa10.03□□□□□ -0.8
UFD1-208ENST00000484101 MDH1P40925 334 aaKnown RBP10.03□□□□□ -0.8
UFD1-208ENST00000484101 SCNN1GP51170 649 aa10.03□□□□□ -0.8
UFD1-208ENST00000484101 GYS2P54840 703 aa10.03□□□□□ -0.8
UFD1-208ENST00000484101 HDAC4P56524 1084 aa10.03□□□□□ -0.8
UFD1-208ENST00000484101 ARL4CP56559 192 aa10.03□□□□□ -0.8
UFD1-208ENST00000484101 BCAR1P56945 870 aa10.03□□□□□ -0.8
UFD1-208ENST00000484101 YWHAZP63104 245 aaKnown RBP10.03□□□□□ -0.8
UFD1-208ENST00000484101 GNGT1P63211 74 aa10.03□□□□□ -0.8
UFD1-208ENST00000484101 ANKRD20A8PQ5CZ79 823 aa10.03□□□□□ -0.8
UFD1-208ENST00000484101 KCNT1Q5JUK3 1230 aa10.03□□□□□ -0.8
UFD1-208ENST00000484101 TRNP1Q6NT89 227 aa10.03□□□□□ -0.8
UFD1-208ENST00000484101 GLB1LQ6UWU2 654 aa10.03□□□□□ -0.8
UFD1-208ENST00000484101 ANKS1BQ7Z6G8 1248 aa10.03□□□□□ -0.8
UFD1-208ENST00000484101 FAM35AQ86V20 835 aa10.03□□□□□ -0.8
UFD1-208ENST00000484101 PIGZQ86VD9 579 aa10.03□□□□□ -0.8
UFD1-208ENST00000484101 ECHDC2Q86YB7 292 aa10.03□□□□□ -0.8
UFD1-208ENST00000484101 SCUBE3Q8IX30 993 aa10.03□□□□□ -0.8
UFD1-208ENST00000484101 THEM5Q8N1Q8 247 aa10.03□□□□□ -0.8
UFD1-208ENST00000484101 SLC43A3Q8NBI5 491 aa10.03□□□□□ -0.8
UFD1-208ENST00000484101 KHSRPQ92945 711 aaKnown RBP eCLIP10.03□□□□□ -0.82e-12■■■□□ 15.4
UFD1-208ENST00000484101 NT5C3BQ969T7 300 aa10.03□□□□□ -0.8
UFD1-208ENST00000484101 NTAN1Q96AB6 310 aa10.03□□□□□ -0.8
UFD1-208ENST00000484101 ZFP42Q96MM3 310 aa10.03□□□□□ -0.8
UFD1-208ENST00000484101 SLC2A13Q96QE2 648 aa10.03□□□□□ -0.8
UFD1-208ENST00000484101 PEBP4Q96S96 227 aa10.03□□□□□ -0.8
UFD1-208ENST00000484101 RBM15Q96T37 977 aaKnown RBP eCLIP10.03□□□□□ -0.84e-6■□□□□ 8.2
UFD1-208ENST00000484101 MED10Q9BTT4 135 aa10.03□□□□□ -0.8
UFD1-208ENST00000484101 SNRNP25Q9BV90 132 aaKnown RBP10.03□□□□□ -0.8
UFD1-208ENST00000484101 FAM107BQ9H098 131 aa10.03□□□□□ -0.8
UFD1-208ENST00000484101 UNC93B1Q9H1C4 597 aa10.03□□□□□ -0.8
UFD1-208ENST00000484101 CXCL16Q9H2A7 254 aa10.03□□□□□ -0.8
UFD1-208ENST00000484101 CENPHQ9H3R5 247 aa10.03□□□□□ -0.8
UFD1-208ENST00000484101 SEMA4AQ9H3S1 761 aa10.03□□□□□ -0.8
UFD1-208ENST00000484101 GOLGA2P5Q9HBQ8 144 aa10.03□□□□□ -0.8
UFD1-208ENST00000484101 POPDC2Q9HBU9 364 aa10.03□□□□□ -0.8
UFD1-208ENST00000484101 PCDH18Q9HCL0 1135 aa10.03□□□□□ -0.8
UFD1-208ENST00000484101 AAASQ9NRG9 546 aa10.03□□□□□ -0.8
UFD1-208ENST00000484101 RGS18Q9NS28 235 aa10.03□□□□□ -0.8
UFD1-208ENST00000484101 KRT82Q9NSB4 513 aa10.03□□□□□ -0.8
UFD1-208ENST00000484101 SENP1Q9P0U3 644 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms