RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 OSER1Q9NX31 292 aa13.67□□□□□ -0.22
UBR4-213ENST00000483922 TOR4AQ9NXH8 423 aa13.67□□□□□ -0.22
UBR4-213ENST00000483922 CACNA2D2Q9NY47 1150 aa13.67□□□□□ -0.22
UBR4-213ENST00000483922 EHD2Q9NZN4 543 aa13.67□□□□□ -0.22
UBR4-213ENST00000483922 CCDC39Q9UFE4 941 aa13.67□□□□□ -0.22
UBR4-213ENST00000483922 SMC3Q9UQE7 1217 aa13.67□□□□□ -0.22
UBR4-213ENST00000483922 SLCO1B1Q9Y6L6 691 aa13.67□□□□□ -0.22
UBR4-213ENST00000483922 KCNJ18B7U540 433 aa13.66□□□□□ -0.22
UBR4-213ENST00000483922 CLIC2O15247 247 aa13.66□□□□□ -0.22
UBR4-213ENST00000483922 DLATP10515 647 aaKnown RBP13.66□□□□□ -0.22
UBR4-213ENST00000483922 SLC5A3P53794 718 aa13.66□□□□□ -0.22
UBR4-213ENST00000483922 GRIK2Q13002 908 aa13.66□□□□□ -0.22
UBR4-213ENST00000483922 ALCAMQ13740 583 aa13.66□□□□□ -0.22
UBR4-213ENST00000483922 RABEP1Q15276 862 aa13.66□□□□□ -0.22
UBR4-213ENST00000483922 PLEKHG6Q3KR16 790 aa13.66□□□□□ -0.22
UBR4-213ENST00000483922 NAXDQ8IW45 347 aa13.66□□□□□ -0.22
UBR4-213ENST00000483922 FUKQ8N0W3 1084 aa13.66□□□□□ -0.22
UBR4-213ENST00000483922 ZNF507Q8TCN5 953 aa13.66□□□□□ -0.22
UBR4-213ENST00000483922 HNRNPLLQ8WVV9 542 aaKnown RBP13.66□□□□□ -0.22
UBR4-213ENST00000483922 OVCA2Q8WZ82 227 aa13.66□□□□□ -0.22
UBR4-213ENST00000483922 SMOQ99835 787 aa13.66□□□□□ -0.22
UBR4-213ENST00000483922 DNAJC17Q9NVM6 304 aaKnown RBP13.66□□□□□ -0.22
UBR4-213ENST00000483922 FBXO10Q9UK96 956 aa13.66□□□□□ -0.22
UBR4-213ENST00000483922 PCOLCE2Q9UKZ9 415 aa13.66□□□□□ -0.22
UBR4-213ENST00000483922 SH3BP1Q9Y3L3 701 aa13.66□□□□□ -0.22
UBR4-213ENST00000483922 A8MXQ7 604 aa13.65□□□□□ -0.22
UBR4-213ENST00000483922 KIAA0391O15091 583 aaKnown RBP13.65□□□□□ -0.22
UBR4-213ENST00000483922 CACNG3O60359 315 aa13.65□□□□□ -0.22
UBR4-213ENST00000483922 ZNF217O75362 1048 aa13.65□□□□□ -0.22
UBR4-213ENST00000483922 RTN3O95197 1032 aaPredicted RBP13.65□□□□□ -0.22
UBR4-213ENST00000483922 ZIC2O95409 532 aaPredicted RBP13.65□□□□□ -0.22
UBR4-213ENST00000483922 SYPP08247 313 aa13.65□□□□□ -0.22
UBR4-213ENST00000483922 CASP4P49662 377 aa13.65□□□□□ -0.22
UBR4-213ENST00000483922 CYP24A1Q07973 514 aa13.65□□□□□ -0.22
UBR4-213ENST00000483922 HNRNPDQ14103 355 aaKnown RBP13.65□□□□□ -0.22
UBR4-213ENST00000483922 PSMD6Q15008 389 aa13.65□□□□□ -0.22
UBR4-213ENST00000483922 SURF1Q15526 300 aa13.65□□□□□ -0.22
UBR4-213ENST00000483922 SNRNP35Q16560 246 aaKnown RBP13.65□□□□□ -0.22
UBR4-213ENST00000483922 BTBD8Q5XKL5 378 aa13.65□□□□□ -0.22
UBR4-213ENST00000483922 GRAMD4Q6IC98 578 aa13.65□□□□□ -0.22
UBR4-213ENST00000483922 DBX2Q6ZNG2 339 aa13.65□□□□□ -0.22
UBR4-213ENST00000483922 TPGS1Q6ZTW0 290 aa13.65□□□□□ -0.22
UBR4-213ENST00000483922 TRMT11Q7Z4G4 463 aaKnown RBP13.65□□□□□ -0.22
UBR4-213ENST00000483922 GLRX5Q86SX6 157 aa13.65□□□□□ -0.22
UBR4-213ENST00000483922 FAM35AQ86V20 835 aa13.65□□□□□ -0.22
UBR4-213ENST00000483922 CHPFQ8IZ52 775 aa13.65□□□□□ -0.22
UBR4-213ENST00000483922 PDZD8Q8NEN9 1154 aa13.65□□□□□ -0.22
UBR4-213ENST00000483922 BAHD1Q8TBE0 780 aaPredicted RBP13.65□□□□□ -0.22
UBR4-213ENST00000483922 DNASE2BQ8WZ79 361 aa13.65□□□□□ -0.22
UBR4-213ENST00000483922 CCDC127Q96BQ5 260 aa13.65□□□□□ -0.22
UBR4-213ENST00000483922 CRELD1Q96HD1 420 aa13.65□□□□□ -0.22
UBR4-213ENST00000483922 CGRRF1Q99675 332 aa13.65□□□□□ -0.22
UBR4-213ENST00000483922 MKRN2Q9H000 416 aaKnown RBP13.65□□□□□ -0.22
UBR4-213ENST00000483922 SMYD3Q9H7B4 428 aa13.65□□□□□ -0.22
UBR4-213ENST00000483922 WSB2Q9NYS7 404 aaPredicted RBP13.65□□□□□ -0.22
UBR4-213ENST00000483922 NXF1Q9UBU9 619 aaKnown RBP13.65□□□□□ -0.22
UBR4-213ENST00000483922 RAXQ9Y2V3 346 aa13.65□□□□□ -0.22
UBR4-213ENST00000483922 PTPRBP23467 1997 aa13.64□□□□□ -0.23
UBR4-213ENST00000483922 NEDD8-MDP1E9PL57 170 aa13.64□□□□□ -0.23
UBR4-213ENST00000483922 DKK1O94907 266 aa13.64□□□□□ -0.23
UBR4-213ENST00000483922 STAU1O95793 577 aaKnown RBP13.64□□□□□ -0.23
UBR4-213ENST00000483922 TYRP14679 529 aa13.64□□□□□ -0.23
UBR4-213ENST00000483922 TNNI1P19237 187 aa13.64□□□□□ -0.23
UBR4-213ENST00000483922 TUBP50607 506 aa13.64□□□□□ -0.23
UBR4-213ENST00000483922 CEBPZQ03701 1054 aaKnown RBP13.64□□□□□ -0.23
UBR4-213ENST00000483922 ORC1Q13415 861 aa13.64□□□□□ -0.23
UBR4-213ENST00000483922 GPRIN1Q7Z2K8 1008 aa13.64□□□□□ -0.23
UBR4-213ENST00000483922 RGL4Q8IZJ4 473 aa13.64□□□□□ -0.23
UBR4-213ENST00000483922 C1orf216Q8TAB5 229 aa13.64□□□□□ -0.23
UBR4-213ENST00000483922 TOE1Q96GM8 510 aaKnown RBP13.64□□□□□ -0.23
UBR4-213ENST00000483922 CCDC86Q9H6F5 360 aaKnown RBP13.64□□□□□ -0.23
UBR4-213ENST00000483922 NMUR1Q9HB89 426 aa13.64□□□□□ -0.23
UBR4-213ENST00000483922 ITM2CQ9NQX7 267 aa13.64□□□□□ -0.23
UBR4-213ENST00000483922 AGPAT3Q9NRZ7 376 aa13.64□□□□□ -0.23
UBR4-213ENST00000483922 MARK1Q9P0L2 795 aa13.64□□□□□ -0.23
UBR4-213ENST00000483922 R3HCC1Q9Y3T6 440 aaKnown RBP13.64□□□□□ -0.23
UBR4-213ENST00000483922 APC2O95996 2303 aa13.64□□□□□ -0.23
UBR4-213ENST00000483922 HELZ2Q9BYK8 2649 aaKnown RBP13.63□□□□□ -0.23
UBR4-213ENST00000483922 KALRNO60229 2985 aa13.63□□□□□ -0.23
UBR4-213ENST00000483922 HHLA1C9JL84 531 aa13.63□□□□□ -0.23
UBR4-213ENST00000483922 MDM4O15151 490 aa13.63□□□□□ -0.23
UBR4-213ENST00000483922 TLR5O60602 858 aa13.63□□□□□ -0.23
UBR4-213ENST00000483922 VNN1O95497 513 aa13.63□□□□□ -0.23
UBR4-213ENST00000483922 CCDC130P13994 396 aa13.63□□□□□ -0.23
UBR4-213ENST00000483922 RDXP35241 583 aaKnown RBP13.63□□□□□ -0.23
UBR4-213ENST00000483922 STAT6P42226 847 aa13.63□□□□□ -0.23
UBR4-213ENST00000483922 E2F4Q16254 413 aa13.63□□□□□ -0.23
UBR4-213ENST00000483922 FUT11Q495W5 492 aa13.63□□□□□ -0.23
UBR4-213ENST00000483922 RABEPKQ7Z6M1 372 aa13.63□□□□□ -0.23
UBR4-213ENST00000483922 METTL3Q86U44 580 aaKnown RBP13.63□□□□□ -0.23
UBR4-213ENST00000483922 PDILTQ8N807 584 aa13.63□□□□□ -0.23
UBR4-213ENST00000483922 SCFD1Q8WVM8 642 aa13.63□□□□□ -0.23
UBR4-213ENST00000483922 BHMTQ93088 406 aa13.63□□□□□ -0.23
UBR4-213ENST00000483922 BBS2Q9BXC9 721 aa13.63□□□□□ -0.23
UBR4-213ENST00000483922 FAM124BQ9H5Z6 455 aaPredicted RBP13.63□□□□□ -0.23
UBR4-213ENST00000483922 KIAA1586Q9HCI6 787 aa13.63□□□□□ -0.23
UBR4-213ENST00000483922 CSNK1G1Q9HCP0 422 aa13.63□□□□□ -0.23
UBR4-213ENST00000483922 PLK2Q9NYY3 685 aa13.63□□□□□ -0.23
UBR4-213ENST00000483922 KIAA1522Q9P206 1035 aaPredicted RBP13.63□□□□□ -0.23
UBR4-213ENST00000483922 USP36Q9P275 1121 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms