RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 ARFGAP2Q8N6H7 521 aa13.8□□□□□ -0.2
CPNE1-225ENST00000483495 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.8□□□□□ -0.2
CPNE1-225ENST00000483495 RSAD2Q8WXG1 361 aa13.8□□□□□ -0.2
CPNE1-225ENST00000483495 P3H4Q92791 437 aa13.8□□□□□ -0.2
CPNE1-225ENST00000483495 NPY6RQ99463 290 aa13.8□□□□□ -0.2
CPNE1-225ENST00000483495 PKMYT1Q99640 499 aa13.8□□□□□ -0.2
CPNE1-225ENST00000483495 PHACTR1Q9C0D0 580 aa13.8□□□□□ -0.2
CPNE1-225ENST00000483495 CENPHQ9H3R5 247 aa13.8□□□□□ -0.2
CPNE1-225ENST00000483495 CSNK1G1Q9HCP0 422 aa13.8□□□□□ -0.2
CPNE1-225ENST00000483495 STARD7Q9NQZ5 370 aa13.8□□□□□ -0.2
CPNE1-225ENST00000483495 MTMR10Q9NXD2 777 aa13.8□□□□□ -0.2
CPNE1-225ENST00000483495 HHLA1C9JL84 531 aa13.79□□□□□ -0.2
CPNE1-225ENST00000483495 ARVCFO00192 962 aa13.79□□□□□ -0.2
CPNE1-225ENST00000483495 APOL1O14791 398 aa13.79□□□□□ -0.2
CPNE1-225ENST00000483495 FKTNO75072 461 aa13.79□□□□□ -0.2
CPNE1-225ENST00000483495 TCEA3O75764 348 aa13.79□□□□□ -0.2
CPNE1-225ENST00000483495 AP1G2O75843 785 aa13.79□□□□□ -0.2
CPNE1-225ENST00000483495 IFNB1P01574 187 aa13.79□□□□□ -0.2
CPNE1-225ENST00000483495 GRK4P32298 578 aa13.79□□□□□ -0.2
CPNE1-225ENST00000483495 RPL22P35268 128 aaKnown RBP13.79□□□□□ -0.2
CPNE1-225ENST00000483495 TKTL1P51854 596 aa13.79□□□□□ -0.2
CPNE1-225ENST00000483495 ATXN1P54253 815 aaKnown RBP13.79□□□□□ -0.2
CPNE1-225ENST00000483495 DNAJC21Q5F1R6 531 aaKnown RBP13.79□□□□□ -0.2
CPNE1-225ENST00000483495 OTUD1Q5VV17 481 aaPredicted RBP13.79□□□□□ -0.2
CPNE1-225ENST00000483495 MFSD5Q6N075 450 aa13.79□□□□□ -0.2
CPNE1-225ENST00000483495 NPNTQ6UXI9 565 aa13.79□□□□□ -0.2
CPNE1-225ENST00000483495 METTL23Q86XA0 190 aa13.79□□□□□ -0.2
CPNE1-225ENST00000483495 LINC01599Q8WXQ3 324 aa13.79□□□□□ -0.2
CPNE1-225ENST00000483495 RSPH1Q8WYR4 309 aa13.79□□□□□ -0.2
CPNE1-225ENST00000483495 RTP4Q96DX8 246 aa13.79□□□□□ -0.2
CPNE1-225ENST00000483495 SMARCD1Q96GM5 515 aa13.79□□□□□ -0.2
CPNE1-225ENST00000483495 SUSD3Q96L08 255 aa13.79□□□□□ -0.2
CPNE1-225ENST00000483495 PWWP2AQ96N64 755 aa13.79□□□□□ -0.2
CPNE1-225ENST00000483495 RBM15Q96T37 977 aaKnown RBP eCLIP13.79□□□□□ -0.23e-7■□□□□ 9.8
CPNE1-225ENST00000483495 SEZ6LQ9BYH1 1024 aa13.79□□□□□ -0.2
CPNE1-225ENST00000483495 POPDC2Q9HBU9 364 aa13.79□□□□□ -0.2
CPNE1-225ENST00000483495 CNGB3Q9NQW8 809 aa13.79□□□□□ -0.2
CPNE1-225ENST00000483495 TMEM30AQ9NV96 361 aa13.79□□□□□ -0.2
CPNE1-225ENST00000483495 NINJ2Q9NZG7 142 aa13.79□□□□□ -0.2
CPNE1-225ENST00000483495 CALCOCO1Q9P1Z2 691 aa13.79□□□□□ -0.2
CPNE1-225ENST00000483495 NOVA2Q9UNW9 492 aaKnown RBP13.79□□□□□ -0.2
CPNE1-225ENST00000483495 AP4E1Q9UPM8 1137 aa13.79□□□□□ -0.2
CPNE1-225ENST00000483495 INPP5FQ9Y2H2 1132 aa13.79□□□□□ -0.2
CPNE1-225ENST00000483495 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.78□□□□□ -0.2
CPNE1-225ENST00000483495 ARHGEF37A1IGU5 675 aa13.78□□□□□ -0.2
CPNE1-225ENST00000483495 SMAPO00193 183 aa13.78□□□□□ -0.2
CPNE1-225ENST00000483495 TYMPP19971 482 aa13.78□□□□□ -0.2
CPNE1-225ENST00000483495 BRCC3P46736 316 aa13.78□□□□□ -0.2
CPNE1-225ENST00000483495 VEGFBP49765 207 aa13.78□□□□□ -0.2
CPNE1-225ENST00000483495 NDUFV1P49821 464 aa13.78□□□□□ -0.2
CPNE1-225ENST00000483495 IRAK1P51617 712 aa13.78□□□□□ -0.2
CPNE1-225ENST00000483495 DAOAP59103 153 aa13.78□□□□□ -0.2
CPNE1-225ENST00000483495 ROR1Q01973 937 aa13.78□□□□□ -0.2
CPNE1-225ENST00000483495 INTS6LQ5JSJ4 861 aaKnown RBP13.78□□□□□ -0.2
CPNE1-225ENST00000483495 NDRG1Q92597 394 aaKnown RBP13.78□□□□□ -0.2
CPNE1-225ENST00000483495 PRCCQ92733 491 aaPredicted RBP13.78□□□□□ -0.2
CPNE1-225ENST00000483495 FAM149B1Q96BN6 582 aa13.78□□□□□ -0.2
CPNE1-225ENST00000483495 NRDE2Q9H7Z3 1164 aa13.78□□□□□ -0.2
CPNE1-225ENST00000483495 C10orf88Q9H8K7 445 aa13.78□□□□□ -0.2
CPNE1-225ENST00000483495 RCOR3Q9P2K3 495 aaPredicted RBP13.78□□□□□ -0.2
CPNE1-225ENST00000483495 SLC12A6Q9UHW9 1150 aa13.78□□□□□ -0.2
CPNE1-225ENST00000483495 STAP1Q9ULZ2 295 aa13.78□□□□□ -0.2
CPNE1-225ENST00000483495 TSC2P49815 1807 aa13.78□□□□□ -0.2
CPNE1-225ENST00000483495 I3L4J1 428 aa13.78□□□□□ -0.2
CPNE1-225ENST00000483495 RASGRF2O14827 1237 aa13.78□□□□□ -0.2
CPNE1-225ENST00000483495 ACSL3O95573 720 aa13.78□□□□□ -0.2
CPNE1-225ENST00000483495 AGTP01019 485 aa13.78□□□□□ -0.2
CPNE1-225ENST00000483495 ABHD2P08910 425 aa13.78□□□□□ -0.2
CPNE1-225ENST00000483495 ZFXP17010 805 aaPredicted RBP13.78□□□□□ -0.2
CPNE1-225ENST00000483495 CYP2F1P24903 491 aa13.78□□□□□ -0.2
CPNE1-225ENST00000483495 MAGEA4P43358 317 aa13.78□□□□□ -0.2
CPNE1-225ENST00000483495 CTCFP49711 727 aaPredicted RBP13.78□□□□□ -0.2
CPNE1-225ENST00000483495 SULT1E1P49888 294 aa13.78□□□□□ -0.2
CPNE1-225ENST00000483495 ATP1A2P50993 1020 aa13.78□□□□□ -0.2
CPNE1-225ENST00000483495 CACNA2D1P54289 1103 aa13.78□□□□□ -0.2
CPNE1-225ENST00000483495 BCAR1P56945 870 aa13.78□□□□□ -0.2
CPNE1-225ENST00000483495 MAGOHP61326 146 aaKnown RBP13.78□□□□□ -0.2
CPNE1-225ENST00000483495 DSC1Q08554 894 aa13.78□□□□□ -0.2
CPNE1-225ENST00000483495 KYNUQ16719 465 aa13.78□□□□□ -0.2
CPNE1-225ENST00000483495 DCAF6Q58WW2 860 aa13.78□□□□□ -0.2
CPNE1-225ENST00000483495 GLB1LQ6UWU2 654 aa13.78□□□□□ -0.2
CPNE1-225ENST00000483495 PPIL6Q8IXY8 311 aa13.78□□□□□ -0.2
CPNE1-225ENST00000483495 CCDC185Q8N715 623 aa13.78□□□□□ -0.2
CPNE1-225ENST00000483495 NAT8LQ8N9F0 302 aa13.78□□□□□ -0.2
CPNE1-225ENST00000483495 FAM71DQ8N9W8 422 aa13.78□□□□□ -0.2
CPNE1-225ENST00000483495 ZNF296Q8WUU4 475 aaPredicted RBP13.78□□□□□ -0.2
CPNE1-225ENST00000483495 CPT1BQ92523 772 aa13.78□□□□□ -0.2
CPNE1-225ENST00000483495 MYLPFQ96A32 169 aa13.78□□□□□ -0.2
CPNE1-225ENST00000483495 KCTD15Q96SI1 283 aaPredicted RBP13.78□□□□□ -0.2
CPNE1-225ENST00000483495 KCNK16Q96T55 309 aa13.78□□□□□ -0.2
CPNE1-225ENST00000483495 ULBP1Q9BZM6 244 aa13.78□□□□□ -0.2
CPNE1-225ENST00000483495 PRDM16Q9HAZ2 1276 aa13.78□□□□□ -0.2
CPNE1-225ENST00000483495 USP29Q9HBJ7 922 aa13.78□□□□□ -0.2
CPNE1-225ENST00000483495 DNAJC17Q9NVM6 304 aaKnown RBP13.78□□□□□ -0.2
CPNE1-225ENST00000483495 BCCIPQ9P287 314 aaKnown RBP eCLIP13.78□□□□□ -0.2
CPNE1-225ENST00000483495 FZD10Q9ULW2 581 aa13.78□□□□□ -0.2
CPNE1-225ENST00000483495 USP3Q9Y6I4 520 aa13.78□□□□□ -0.2
CPNE1-225ENST00000483495 BCLAF3A2AJT9 711 aaKnown RBP13.77□□□□□ -0.21
CPNE1-225ENST00000483495 CFAP69A5D8W1 941 aa13.77□□□□□ -0.21
CPNE1-225ENST00000483495 DCDC2CA8MYV0 355 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms