RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 HOOK1Q9UJC3 728 aaKnown RBP12.72□□□□□ -0.37
HDLBP-239ENST00000483086 ADH5P11766 374 aa12.71□□□□□ -0.37
HDLBP-239ENST00000483086 HOXA6P31267 233 aa12.71□□□□□ -0.37
HDLBP-239ENST00000483086 KIR2DL1P43626 348 aaPredicted RBP12.71□□□□□ -0.37
HDLBP-239ENST00000483086 ZNF132P52740 706 aa12.71□□□□□ -0.37
HDLBP-239ENST00000483086 KDSRQ06136 332 aa12.71□□□□□ -0.37
HDLBP-239ENST00000483086 KCNH2Q12809 1159 aa12.71□□□□□ -0.37
HDLBP-239ENST00000483086 STIM1Q13586 685 aa12.71□□□□□ -0.37
HDLBP-239ENST00000483086 CCDC40Q4G0X9 1142 aa12.71□□□□□ -0.37
HDLBP-239ENST00000483086 C2orf27AQ580R0 203 aa12.71□□□□□ -0.37
HDLBP-239ENST00000483086 GJB7Q6PEY0 223 aa12.71□□□□□ -0.37
HDLBP-239ENST00000483086 TMEM92Q6UXU6 159 aa12.71□□□□□ -0.37
HDLBP-239ENST00000483086 HTR3DQ70Z44 454 aa12.71□□□□□ -0.37
HDLBP-239ENST00000483086 RRAGAQ7L523 313 aa12.71□□□□□ -0.37
HDLBP-239ENST00000483086 WDR5BQ86VZ2 330 aa12.71□□□□□ -0.37
HDLBP-239ENST00000483086 MIB1Q86YT6 1006 aa12.71□□□□□ -0.37
HDLBP-239ENST00000483086 KIAA1958Q8N8K9 716 aa12.71□□□□□ -0.37
HDLBP-239ENST00000483086 NAT16Q8N8M0 369 aa12.71□□□□□ -0.37
HDLBP-239ENST00000483086 CCDC150Q8NCX0 1101 aa12.71□□□□□ -0.37
HDLBP-239ENST00000483086 RMDN1Q96DB5 314 aa12.71□□□□□ -0.37
HDLBP-239ENST00000483086 ULBP1Q9BZM6 244 aa12.71□□□□□ -0.37
HDLBP-239ENST00000483086 METTL14Q9HCE5 456 aaKnown RBP12.71□□□□□ -0.37
HDLBP-239ENST00000483086 AJAP1Q9UKB5 411 aaPredicted RBP12.71□□□□□ -0.37
HDLBP-239ENST00000483086 GON4LQ3T8J9 2241 aa12.7□□□□□ -0.38
HDLBP-239ENST00000483086 A0A0A0MRY4 1105 aa12.7□□□□□ -0.38
HDLBP-239ENST00000483086 DCLK1O15075 740 aa12.7□□□□□ -0.38
HDLBP-239ENST00000483086 HOXC11O43248 304 aaPredicted RBP12.7□□□□□ -0.38
HDLBP-239ENST00000483086 ADAM23O75077 832 aa12.7□□□□□ -0.38
HDLBP-239ENST00000483086 STC2O76061 302 aa12.7□□□□□ -0.38
HDLBP-239ENST00000483086 KAT7O95251 611 aa12.7□□□□□ -0.38
HDLBP-239ENST00000483086 BRD2P25440 801 aaKnown RBP12.7□□□□□ -0.38
HDLBP-239ENST00000483086 ATP5C1P36542 298 aaKnown RBP12.7□□□□□ -0.38
HDLBP-239ENST00000483086 NRLP54845 237 aa12.7□□□□□ -0.38
HDLBP-239ENST00000483086 DMC1Q14565 340 aa12.7□□□□□ -0.38
HDLBP-239ENST00000483086 PM20D1Q6GTS8 502 aa12.7□□□□□ -0.38
HDLBP-239ENST00000483086 TMEM270Q6UE05 265 aa12.7□□□□□ -0.38
HDLBP-239ENST00000483086 SYT13Q7L8C5 426 aa12.7□□□□□ -0.38
HDLBP-239ENST00000483086 DDX42Q86XP3 938 aaKnown RBP eCLIP12.7□□□□□ -0.38
HDLBP-239ENST00000483086 CCDC33Q8N5R6 958 aa12.7□□□□□ -0.38
HDLBP-239ENST00000483086 IL17RCQ8NAC3 791 aa12.7□□□□□ -0.38
HDLBP-239ENST00000483086 GTPBP4Q9BZE4 634 aaKnown RBP12.7□□□□□ -0.38
HDLBP-239ENST00000483086 UBXN6Q9BZV1 441 aa12.7□□□□□ -0.38
HDLBP-239ENST00000483086 ACP6Q9NPH0 428 aa12.7□□□□□ -0.38
HDLBP-239ENST00000483086 SPHK2Q9NRA0 654 aa12.7□□□□□ -0.38
HDLBP-239ENST00000483086 NAGPAQ9UK23 515 aa12.7□□□□□ -0.38
HDLBP-239ENST00000483086 SH3BP1Q9Y3L3 701 aa12.7□□□□□ -0.38
HDLBP-239ENST00000483086 SPEGQ15772 3267 aa12.7□□□□□ -0.38
HDLBP-239ENST00000483086 MUC22E2RYF6 1773 aaPredicted RBP12.69□□□□□ -0.38
HDLBP-239ENST00000483086 SGK1O00141 431 aa12.69□□□□□ -0.38
HDLBP-239ENST00000483086 PIK3R2O00459 728 aa12.69□□□□□ -0.38
HDLBP-239ENST00000483086 XPO1O14980 1071 aaKnown RBP12.69□□□□□ -0.38
HDLBP-239ENST00000483086 TULP3O75386 442 aa12.69□□□□□ -0.38
HDLBP-239ENST00000483086 VDRP11473 427 aa12.69□□□□□ -0.38
HDLBP-239ENST00000483086 CD19P15391 556 aa12.69□□□□□ -0.38
HDLBP-239ENST00000483086 TKTL1P51854 596 aa12.69□□□□□ -0.38
HDLBP-239ENST00000483086 ADIGQ0VDE8 80 aa12.69□□□□□ -0.38
HDLBP-239ENST00000483086 NR1H3Q13133 447 aa12.69□□□□□ -0.38
HDLBP-239ENST00000483086 SIM2Q14190 667 aaPredicted RBP12.69□□□□□ -0.38
HDLBP-239ENST00000483086 FBXO43Q4G163 708 aa12.69□□□□□ -0.38
HDLBP-239ENST00000483086 SGO2Q562F6 1265 aa12.69□□□□□ -0.38
HDLBP-239ENST00000483086 C10orf120Q5SQS8 335 aa12.69□□□□□ -0.38
HDLBP-239ENST00000483086 DPY19L2P1Q6NXN4 242 aa12.69□□□□□ -0.38
HDLBP-239ENST00000483086 PMF1Q6P1K2 205 aa12.69□□□□□ -0.38
HDLBP-239ENST00000483086 KLHDC10Q6PID8 442 aa12.69□□□□□ -0.38
HDLBP-239ENST00000483086 PRR23BQ6ZRT6 265 aa12.69□□□□□ -0.38
HDLBP-239ENST00000483086 TPGS1Q6ZTW0 290 aa12.69□□□□□ -0.38
HDLBP-239ENST00000483086 TOGARAM2Q6ZUX3 1019 aa12.69□□□□□ -0.38
HDLBP-239ENST00000483086 PPM1KQ8N3J5 372 aa12.69□□□□□ -0.38
HDLBP-239ENST00000483086 FAM160A2Q8N612 972 aaPredicted RBP12.69□□□□□ -0.38
HDLBP-239ENST00000483086 ALLCQ8N6M5 410 aa12.69□□□□□ -0.38
HDLBP-239ENST00000483086 EHBP1Q8NDI1 1231 aa12.69□□□□□ -0.38
HDLBP-239ENST00000483086 CLEC4CQ8WTT0 213 aa12.69□□□□□ -0.38
HDLBP-239ENST00000483086 NT5C1BQ96P26 610 aa12.69□□□□□ -0.38
HDLBP-239ENST00000483086 PNKPQ96T60 521 aa12.69□□□□□ -0.38
HDLBP-239ENST00000483086 HINFPQ9BQA5 517 aa12.69□□□□□ -0.38
HDLBP-239ENST00000483086 INTS2Q9H0H0 1204 aaKnown RBP12.69□□□□□ -0.38
HDLBP-239ENST00000483086 CLSTN2Q9H4D0 955 aa12.69□□□□□ -0.38
HDLBP-239ENST00000483086 FAM124BQ9H5Z6 455 aaPredicted RBP12.69□□□□□ -0.38
HDLBP-239ENST00000483086 TBC1D14Q9P2M4 693 aa12.69□□□□□ -0.38
HDLBP-239ENST00000483086 RWDD2AQ9UIY3 292 aa12.69□□□□□ -0.38
HDLBP-239ENST00000483086 CLEC4EQ9ULY5 219 aa12.69□□□□□ -0.38
HDLBP-239ENST00000483086 NCOR2Q9Y618 2525 aa12.68□□□□□ -0.38
HDLBP-239ENST00000483086 CKAP5Q14008 2032 aa12.68□□□□□ -0.38
HDLBP-239ENST00000483086 BICDL2A1A5D9 508 aa12.68□□□□□ -0.38
HDLBP-239ENST00000483086 YJEFN3A6XGL0 299 aa12.68□□□□□ -0.38
HDLBP-239ENST00000483086 PRRT4C9JH25 899 aa12.68□□□□□ -0.38
HDLBP-239ENST00000483086 E7ENQ6 273 aa12.68□□□□□ -0.38
HDLBP-239ENST00000483086 SLC9A3R1O14745 358 aaPredicted RBP12.68□□□□□ -0.38
HDLBP-239ENST00000483086 P4HA2O15460 535 aa12.68□□□□□ -0.38
HDLBP-239ENST00000483086 ADH1CP00326 375 aa12.68□□□□□ -0.38
HDLBP-239ENST00000483086 AFPP02771 609 aaKnown RBP12.68□□□□□ -0.38
HDLBP-239ENST00000483086 HMBSP08397 361 aa12.68□□□□□ -0.38
HDLBP-239ENST00000483086 CISD3P0C7P0 127 aa12.68□□□□□ -0.38
HDLBP-239ENST00000483086 SLC9A1P19634 815 aa12.68□□□□□ -0.38
HDLBP-239ENST00000483086 TBXAS1P24557 533 aaPredicted RBP12.68□□□□□ -0.38
HDLBP-239ENST00000483086 TIE1P35590 1138 aa12.68□□□□□ -0.38
HDLBP-239ENST00000483086 PPP1R2P41236 205 aa12.68□□□□□ -0.38
HDLBP-239ENST00000483086 PLA2G4AP47712 749 aa12.68□□□□□ -0.38
HDLBP-239ENST00000483086 RGS7P49802 495 aa12.68□□□□□ -0.38
HDLBP-239ENST00000483086 BCAT1P54687 386 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms