RNA–Protein interactions for RNA: ENST00000482889.1

CLCC1-209, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 752 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-209ENST00000482889 UBAP2Q5T6F2 1119 aaKnown RBP4.11□□□□□ -1.75
CLCC1-209ENST00000482889 L1TD1Q5T7N2 865 aaKnown RBP4.11□□□□□ -1.75
CLCC1-209ENST00000482889 DEPDC1Q5TB30 811 aa4.11□□□□□ -1.75
CLCC1-209ENST00000482889 FAM205BPQ63HN1 556 aa4.11□□□□□ -1.75
CLCC1-209ENST00000482889 HAUS3Q68CZ6 603 aa4.11□□□□□ -1.75
CLCC1-209ENST00000482889 SLC9A4Q6AI14 798 aa4.11□□□□□ -1.75
CLCC1-209ENST00000482889 GRHL2Q6ISB3 625 aa4.11□□□□□ -1.75
CLCC1-209ENST00000482889 TCTN3Q6NUS6 607 aa4.11□□□□□ -1.75
CLCC1-209ENST00000482889 LAYNQ6UX15 382 aa4.11□□□□□ -1.75
CLCC1-209ENST00000482889 SYNE3Q6ZMZ3 975 aa4.11□□□□□ -1.75
CLCC1-209ENST00000482889 Q6ZSN1 163 aa4.11□□□□□ -1.75
CLCC1-209ENST00000482889 RAB11FIP2Q7L804 512 aa4.11□□□□□ -1.75
CLCC1-209ENST00000482889 LIMS2Q7Z4I7 341 aa4.11□□□□□ -1.75
CLCC1-209ENST00000482889 CHD1LQ86WJ1 897 aa4.11□□□□□ -1.75
CLCC1-209ENST00000482889 CIR1Q86X95 450 aaPredicted RBP4.11□□□□□ -1.75
CLCC1-209ENST00000482889 FAM9BQ8IZU0 186 aa4.11□□□□□ -1.75
CLCC1-209ENST00000482889 TCP11L2Q8N4U5 519 aa4.11□□□□□ -1.75
CLCC1-209ENST00000482889 TMEM57Q8N5G2 664 aa4.11□□□□□ -1.75
CLCC1-209ENST00000482889 PDILTQ8N807 584 aa4.11□□□□□ -1.75
CLCC1-209ENST00000482889 C1orf131Q8NDD1 294 aaKnown RBP4.11□□□□□ -1.75
CLCC1-209ENST00000482889 LINS1Q8NG48 757 aa4.11□□□□□ -1.75
CLCC1-209ENST00000482889 TDRD7Q8NHU6 1098 aaKnown RBP4.11□□□□□ -1.75
CLCC1-209ENST00000482889 SLC22A17Q8WUG5 538 aa4.11□□□□□ -1.75
CLCC1-209ENST00000482889 RFFLQ8WZ73 363 aa4.11□□□□□ -1.75
CLCC1-209ENST00000482889 ZDHHC12Q96GR4 267 aa4.11□□□□□ -1.75
CLCC1-209ENST00000482889 PRR11Q96HE9 360 aaPredicted RBP4.11□□□□□ -1.75
CLCC1-209ENST00000482889 SERINC2Q96SA4 455 aa4.11□□□□□ -1.75
CLCC1-209ENST00000482889 C17orf80Q9BSJ5 609 aa4.11□□□□□ -1.75
CLCC1-209ENST00000482889 AMBRA1Q9C0C7 1298 aa4.11□□□□□ -1.75
CLCC1-209ENST00000482889 PRDM13Q9H4Q3 707 aa4.11□□□□□ -1.75
CLCC1-209ENST00000482889 ZNF768Q9H5H4 540 aaKnown RBP4.11□□□□□ -1.75
CLCC1-209ENST00000482889 PLEKHA2Q9HB19 425 aa4.11□□□□□ -1.75
CLCC1-209ENST00000482889 OLA1Q9NTK5 396 aaKnown RBP4.11□□□□□ -1.75
CLCC1-209ENST00000482889 ARHGAP26Q9UNA1 814 aa4.11□□□□□ -1.75
CLCC1-209ENST00000482889 C19orf53Q9UNZ5 99 aaPredicted RBP4.11□□□□□ -1.75
CLCC1-209ENST00000482889 USP22Q9UPT9 525 aa4.11□□□□□ -1.75
CLCC1-209ENST00000482889 MAP3K2Q9Y2U5 619 aa4.11□□□□□ -1.75
CLCC1-209ENST00000482889 COL15A1P39059 1388 aa4.11□□□□□ -1.75
CLCC1-209ENST00000482889 RUSC2Q8N2Y8 1516 aa4.11□□□□□ -1.75
CLCC1-209ENST00000482889 LOC105369274A0A096LPK9 316 aa4.1□□□□□ -1.75
CLCC1-209ENST00000482889 LOC102723532A0A0G2JNH3 316 aa4.1□□□□□ -1.75
CLCC1-209ENST00000482889 SLC38A8A6NNN8 435 aa4.1□□□□□ -1.75
CLCC1-209ENST00000482889 GRXCR1A8MXD5 290 aa4.1□□□□□ -1.75
CLCC1-209ENST00000482889 AHRRA9YTQ3 701 aa4.1□□□□□ -1.75
CLCC1-209ENST00000482889 F5H697 171 aa4.1□□□□□ -1.75
CLCC1-209ENST00000482889 PPM1DO15297 605 aa4.1□□□□□ -1.75
CLCC1-209ENST00000482889 KLK10O43240 276 aa4.1□□□□□ -1.75
CLCC1-209ENST00000482889 MFAP3LO75121 409 aa4.1□□□□□ -1.75
CLCC1-209ENST00000482889 HEXIM1O94992 359 aaKnown RBP4.1□□□□□ -1.75
CLCC1-209ENST00000482889 DDX58O95786 925 aaKnown RBP4.1□□□□□ -1.75
CLCC1-209ENST00000482889 ABCD3P28288 659 aa4.1□□□□□ -1.75
CLCC1-209ENST00000482889 SERPINA4P29622 427 aa4.1□□□□□ -1.75
CLCC1-209ENST00000482889 NDUFV1P49821 464 aa4.1□□□□□ -1.75
CLCC1-209ENST00000482889 SCNN1GP51170 649 aa4.1□□□□□ -1.75
CLCC1-209ENST00000482889 RBM5P52756 815 aaKnown RBP eCLIP4.1□□□□□ -1.75
CLCC1-209ENST00000482889 FAM189BP81408 668 aa4.1□□□□□ -1.75
CLCC1-209ENST00000482889 GALNT2Q10471 571 aa4.1□□□□□ -1.75
CLCC1-209ENST00000482889 SF3A3Q12874 501 aaKnown RBP eCLIP4.1□□□□□ -1.75
CLCC1-209ENST00000482889 TDGQ13569 410 aa4.1□□□□□ -1.75
CLCC1-209ENST00000482889 TMEM196Q5HYL7 178 aa4.1□□□□□ -1.75
CLCC1-209ENST00000482889 ATG16L1Q676U5 607 aa4.1□□□□□ -1.75
CLCC1-209ENST00000482889 MFSD5Q6N075 450 aa4.1□□□□□ -1.75
CLCC1-209ENST00000482889 NEK10Q6ZWH5 1172 aa4.1□□□□□ -1.75
CLCC1-209ENST00000482889 H1FNTQ75WM6 255 aaPredicted RBP4.1□□□□□ -1.75
CLCC1-209ENST00000482889 TRABD2AQ86V40 505 aa4.1□□□□□ -1.75
CLCC1-209ENST00000482889 ADGRG5Q8IZF4 528 aa4.1□□□□□ -1.75
CLCC1-209ENST00000482889 SPARTQ8N0X7 666 aa4.1□□□□□ -1.75
CLCC1-209ENST00000482889 OR4N4Q8N0Y3 316 aa4.1□□□□□ -1.75
CLCC1-209ENST00000482889 ABRAQ8N0Z2 381 aa4.1□□□□□ -1.75
CLCC1-209ENST00000482889 D2HGDHQ8N465 521 aa4.1□□□□□ -1.75
CLCC1-209ENST00000482889 TSPYL6Q8N831 410 aa4.1□□□□□ -1.75
CLCC1-209ENST00000482889 MBD3L2Q8NHZ7 208 aaPredicted RBP4.1□□□□□ -1.75
CLCC1-209ENST00000482889 ABHD5Q8WTS1 349 aa4.1□□□□□ -1.75
CLCC1-209ENST00000482889 TBC1D22AQ8WUA7 517 aa4.1□□□□□ -1.75
CLCC1-209ENST00000482889 HMGB4Q8WW32 186 aa4.1□□□□□ -1.75
CLCC1-209ENST00000482889 STAMQ92783 540 aa4.1□□□□□ -1.75
CLCC1-209ENST00000482889 RSRC1Q96IZ7 334 aaKnown RBP4.1□□□□□ -1.75
CLCC1-209ENST00000482889 LOXL4Q96JB6 756 aa4.1□□□□□ -1.75
CLCC1-209ENST00000482889 MNTQ99583 582 aa4.1□□□□□ -1.75
CLCC1-209ENST00000482889 KRTAP3-1Q9BYR8 98 aa4.1□□□□□ -1.75
CLCC1-209ENST00000482889 ACAD9Q9H845 621 aa4.1□□□□□ -1.75
CLCC1-209ENST00000482889 JMJD4Q9H9V9 463 aa4.1□□□□□ -1.75
CLCC1-209ENST00000482889 SMYD2Q9NRG4 433 aa4.1□□□□□ -1.75
CLCC1-209ENST00000482889 IRAK4Q9NWZ3 460 aa4.1□□□□□ -1.75
CLCC1-209ENST00000482889 ZDHHC7Q9NXF8 308 aa4.1□□□□□ -1.75
CLCC1-209ENST00000482889 POLG2Q9UHN1 485 aa4.1□□□□□ -1.75
CLCC1-209ENST00000482889 NAALADL1Q9UQQ1 740 aa4.1□□□□□ -1.75
CLCC1-209ENST00000482889 CHST2Q9Y4C5 530 aa4.1□□□□□ -1.75
CLCC1-209ENST00000482889 AFG3L2Q9Y4W6 797 aa4.1□□□□□ -1.75
CLCC1-209ENST00000482889 CYP46A1Q9Y6A2 500 aa4.1□□□□□ -1.75
CLCC1-209ENST00000482889 PGPEP1LA6NFU8 196 aa4.09□□□□□ -1.75
CLCC1-209ENST00000482889 AGAP5A6NIR3 686 aa4.09□□□□□ -1.75
CLCC1-209ENST00000482889 PATE3B3GLJ2 98 aa4.09□□□□□ -1.75
CLCC1-209ENST00000482889 C1QTNF3-AMACRE9PGA6 284 aa4.09□□□□□ -1.75
CLCC1-209ENST00000482889 TOR1BO14657 336 aa4.09□□□□□ -1.75
CLCC1-209ENST00000482889 FIBPO43427 364 aa4.09□□□□□ -1.75
CLCC1-209ENST00000482889 RTN3O95197 1032 aaPredicted RBP4.09□□□□□ -1.75
CLCC1-209ENST00000482889 GPANK1O95872 356 aa4.09□□□□□ -1.75
CLCC1-209ENST00000482889 CSF1P09603 554 aa4.09□□□□□ -1.75
CLCC1-209ENST00000482889 ALADP13716 330 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms