RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 KIAA1958Q8N8K9 716 aa16.07■□□□□ 0.16
CCM2-215ENST00000482714 RNF139Q8WU17 664 aa16.07■□□□□ 0.16
CCM2-215ENST00000482714 FGF13Q92913 245 aa16.07■□□□□ 0.16
CCM2-215ENST00000482714 KHSRPQ92945 711 aaKnown RBP eCLIP16.07■□□□□ 0.16
CCM2-215ENST00000482714 E2F7Q96AV8 911 aa16.07■□□□□ 0.16
CCM2-215ENST00000482714 ACSF2Q96CM8 615 aaPredicted RBP16.07■□□□□ 0.16
CCM2-215ENST00000482714 PHF7Q9BWX1 381 aaPredicted RBP16.07■□□□□ 0.16
CCM2-215ENST00000482714 NMUR1Q9HB89 426 aa16.07■□□□□ 0.16
CCM2-215ENST00000482714 CDH7Q9ULB5 785 aa16.07■□□□□ 0.16
CCM2-215ENST00000482714 SCINQ9Y6U3 715 aa16.07■□□□□ 0.16
CCM2-215ENST00000482714 CUL9Q8IWT3 2517 aa16.07■□□□□ 0.16
CCM2-215ENST00000482714 ZNF638Q14966 1978 aaKnown RBP16.07■□□□□ 0.16
CCM2-215ENST00000482714 NOTCH4Q99466 2003 aa16.06■□□□□ 0.16
CCM2-215ENST00000482714 CAPN9O14815 690 aa16.06■□□□□ 0.16
CCM2-215ENST00000482714 TLR5O60602 858 aa16.06■□□□□ 0.16
CCM2-215ENST00000482714 TADA3O75528 432 aa16.06■□□□□ 0.16
CCM2-215ENST00000482714 ABL1P00519 1130 aa16.06■□□□□ 0.16
CCM2-215ENST00000482714 NOS2P35228 1153 aa16.06■□□□□ 0.16
CCM2-215ENST00000482714 MAGEA1P43355 309 aa16.06■□□□□ 0.16
CCM2-215ENST00000482714 KPNA1P52294 538 aaPredicted RBP16.06■□□□□ 0.16
CCM2-215ENST00000482714 GALCP54803 685 aa16.06■□□□□ 0.16
CCM2-215ENST00000482714 PTCRAQ6ISU1 281 aaPredicted RBP16.06■□□□□ 0.16
CCM2-215ENST00000482714 ITFG1Q8TB96 612 aa16.06■□□□□ 0.16
CCM2-215ENST00000482714 FAM149B1Q96BN6 582 aa16.06■□□□□ 0.16
CCM2-215ENST00000482714 TCEAL4Q96EI5 215 aa16.06■□□□□ 0.16
CCM2-215ENST00000482714 CALR3Q96L12 384 aaKnown RBP16.06■□□□□ 0.16
CCM2-215ENST00000482714 SLC2A13Q96QE2 648 aa16.06■□□□□ 0.16
CCM2-215ENST00000482714 SELENOOQ9BVL4 669 aa16.06■□□□□ 0.16
CCM2-215ENST00000482714 SLC46A2Q9BY10 475 aa16.06■□□□□ 0.16
CCM2-215ENST00000482714 POMKQ9H5K3 350 aa16.06■□□□□ 0.16
CCM2-215ENST00000482714 TRPV4Q9HBA0 871 aa16.06■□□□□ 0.16
CCM2-215ENST00000482714 THEGQ9P2T0 379 aa16.06■□□□□ 0.16
CCM2-215ENST00000482714 TJP2Q9UDY2 1190 aa16.06■□□□□ 0.16
CCM2-215ENST00000482714 LCMT1Q9UIC8 334 aa16.06■□□□□ 0.16
CCM2-215ENST00000482714 TMEM59LQ9UK28 342 aa16.06■□□□□ 0.16
CCM2-215ENST00000482714 NR2E1Q9Y466 385 aa16.06■□□□□ 0.16
CCM2-215ENST00000482714 SPTBN5Q9NRC6 3674 aaKnown RBP16.06■□□□□ 0.16
CCM2-215ENST00000482714 PATJQ8NI35 1801 aa16.06■□□□□ 0.16
CCM2-215ENST00000482714 TRAV19A0A0A6YYK7 116 aa16.05■□□□□ 0.16
CCM2-215ENST00000482714 TCRBV5S1A1TA0A578 114 aa16.05■□□□□ 0.16
CCM2-215ENST00000482714 PIK3R2O00459 728 aa16.05■□□□□ 0.16
CCM2-215ENST00000482714 PTMAP06454 111 aaKnown RBP16.05■□□□□ 0.16
CCM2-215ENST00000482714 TMEM253P0C7T8 217 aa16.05■□□□□ 0.16
CCM2-215ENST00000482714 RRM1P23921 792 aa16.05■□□□□ 0.16
CCM2-215ENST00000482714 MATKP42679 507 aa16.05■□□□□ 0.16
CCM2-215ENST00000482714 SLC7A9P82251 487 aa16.05■□□□□ 0.16
CCM2-215ENST00000482714 COG7P83436 770 aa16.05■□□□□ 0.16
CCM2-215ENST00000482714 TCEAL1Q15170 157 aa16.05■□□□□ 0.16
CCM2-215ENST00000482714 TEAD2Q15562 447 aa16.05■□□□□ 0.16
CCM2-215ENST00000482714 CLUL1Q15846 466 aa16.05■□□□□ 0.16
CCM2-215ENST00000482714 GPR158Q5T848 1215 aa16.05■□□□□ 0.16
CCM2-215ENST00000482714 FAM102AQ5T9C2 384 aaPredicted RBP16.05■□□□□ 0.16
CCM2-215ENST00000482714 MSANTD2Q6P1R3 559 aa16.05■□□□□ 0.16
CCM2-215ENST00000482714 CMTM8Q8IZV2 173 aa16.05■□□□□ 0.16
CCM2-215ENST00000482714 CTNNBL1Q8WYA6 563 aaPredicted RBP16.05■□□□□ 0.16
CCM2-215ENST00000482714 NXPE3Q969Y0 559 aa16.05■□□□□ 0.16
CCM2-215ENST00000482714 EPS15L1Q9UBC2 864 aa16.05■□□□□ 0.16
CCM2-215ENST00000482714 CNOT8Q9UFF9 292 aaKnown RBP16.05■□□□□ 0.16
CCM2-215ENST00000482714 PRKAG3Q9UGI9 489 aa16.05■□□□□ 0.16
CCM2-215ENST00000482714 DNMT3LQ9UJW3 386 aa16.05■□□□□ 0.16
CCM2-215ENST00000482714 DOCK6Q96HP0 2047 aa16.05■□□□□ 0.16
CCM2-215ENST00000482714 SOWAHDA6NJG2 315 aa16.04■□□□□ 0.16
CCM2-215ENST00000482714 F9P00740 461 aa16.04■□□□□ 0.16
CCM2-215ENST00000482714 CYP1A2P05177 515 aa16.04■□□□□ 0.16
CCM2-215ENST00000482714 FYNP06241 537 aa16.04■□□□□ 0.16
CCM2-215ENST00000482714 LAMP2P13473 410 aa16.04■□□□□ 0.16
CCM2-215ENST00000482714 NCAM1P13591 858 aa16.04■□□□□ 0.16
CCM2-215ENST00000482714 TCF3P15923 654 aa16.04■□□□□ 0.16
CCM2-215ENST00000482714 AVPR1AP37288 418 aa16.04■□□□□ 0.16
CCM2-215ENST00000482714 NNTQ13423 1086 aa16.04■□□□□ 0.16
CCM2-215ENST00000482714 MAMLD1Q13495 774 aa16.04■□□□□ 0.16
CCM2-215ENST00000482714 PPP1R15BQ5SWA1 713 aa16.04■□□□□ 0.16
CCM2-215ENST00000482714 TXNDC8Q6A555 127 aa16.04■□□□□ 0.16
CCM2-215ENST00000482714 DNAJC24Q6P3W2 148 aa16.04■□□□□ 0.16
CCM2-215ENST00000482714 RAD9BQ6WBX8 426 aa16.04■□□□□ 0.16
CCM2-215ENST00000482714 RSRC2Q7L4I2 434 aaKnown RBP16.04■□□□□ 0.16
CCM2-215ENST00000482714 NPAS3Q8IXF0 933 aa16.04■□□□□ 0.16
CCM2-215ENST00000482714 MAB21L3Q8N8X9 362 aa16.04■□□□□ 0.16
CCM2-215ENST00000482714 FNIP1Q8TF40 1166 aa16.04■□□□□ 0.16
CCM2-215ENST00000482714 CLEC4CQ8WTT0 213 aa16.04■□□□□ 0.16
CCM2-215ENST00000482714 NDRG1Q92597 394 aaKnown RBP16.04■□□□□ 0.16
CCM2-215ENST00000482714 NT5C3BQ969T7 300 aa16.04■□□□□ 0.16
CCM2-215ENST00000482714 NCAPGQ9BPX3 1015 aa16.04■□□□□ 0.16
CCM2-215ENST00000482714 DDX23Q9BUQ8 820 aaKnown RBP16.04■□□□□ 0.16
CCM2-215ENST00000482714 SPTLC3Q9NUV7 552 aa16.04■□□□□ 0.16
CCM2-215ENST00000482714 OSER1Q9NX31 292 aa16.04■□□□□ 0.16
CCM2-215ENST00000482714 OBP2AQ9NY56 170 aa16.04■□□□□ 0.16
CCM2-215ENST00000482714 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.04■□□□□ 0.16
CCM2-215ENST00000482714 UVRAGQ9P2Y5 699 aa16.04■□□□□ 0.16
CCM2-215ENST00000482714 STAP1Q9ULZ2 295 aa16.04■□□□□ 0.16
CCM2-215ENST00000482714 PCDHA13Q9Y5I0 950 aa16.04■□□□□ 0.16
CCM2-215ENST00000482714 VCANP13611 3396 aa16.04■□□□□ 0.16
CCM2-215ENST00000482714 REV3LO60673 3130 aa16.04■□□□□ 0.16
CCM2-215ENST00000482714 ZNF263O14978 683 aa16.03■□□□□ 0.16
CCM2-215ENST00000482714 GJA1P17302 382 aa16.03■□□□□ 0.16
CCM2-215ENST00000482714 DESP17661 470 aa16.03■□□□□ 0.16
CCM2-215ENST00000482714 GBP1P32455 592 aa16.03■□□□□ 0.16
CCM2-215ENST00000482714 MTA1Q13330 715 aa16.03■□□□□ 0.16
CCM2-215ENST00000482714 C2CD6Q53TS8 623 aa16.03■□□□□ 0.16
CCM2-215ENST00000482714 DCUN1D2Q6PH85 259 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms