RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 TNS4Q8IZW8 715 aa13.18□□□□□ -0.3
VPS52-218ENST00000482399 SAMD3Q8N6K7 520 aa13.18□□□□□ -0.3
VPS52-218ENST00000482399 NAT8LQ8N9F0 302 aa13.18□□□□□ -0.3
VPS52-218ENST00000482399 AKT1S1Q96B36 256 aa13.18□□□□□ -0.3
VPS52-218ENST00000482399 KRT82Q9NSB4 513 aa13.18□□□□□ -0.3
VPS52-218ENST00000482399 SOX13Q9UN79 622 aa13.18□□□□□ -0.3
VPS52-218ENST00000482399 MED7O43513 233 aa13.18□□□□□ -0.3
VPS52-218ENST00000482399 DNAJC6O75061 913 aa13.18□□□□□ -0.3
VPS52-218ENST00000482399 ITGB3P05106 788 aa13.18□□□□□ -0.3
VPS52-218ENST00000482399 CXCL8P10145 99 aa13.18□□□□□ -0.3
VPS52-218ENST00000482399 NELFEP18615 380 aaKnown RBP13.18□□□□□ -0.3
VPS52-218ENST00000482399 PEX2P28328 305 aa13.18□□□□□ -0.3
VPS52-218ENST00000482399 PHKA2P46019 1235 aa13.18□□□□□ -0.3
VPS52-218ENST00000482399 CDC16Q13042 620 aa13.18□□□□□ -0.3
VPS52-218ENST00000482399 USP4Q13107 963 aa13.18□□□□□ -0.3
VPS52-218ENST00000482399 CNGA3Q16281 694 aa13.18□□□□□ -0.3
VPS52-218ENST00000482399 SESTD1Q86VW0 696 aa13.18□□□□□ -0.3
VPS52-218ENST00000482399 DCLK2Q8N568 766 aa13.18□□□□□ -0.3
VPS52-218ENST00000482399 SLC35B2Q8TB61 432 aa13.18□□□□□ -0.3
VPS52-218ENST00000482399 CDKL2Q92772 493 aa13.18□□□□□ -0.3
VPS52-218ENST00000482399 LRGUKQ96M69 825 aa13.18□□□□□ -0.3
VPS52-218ENST00000482399 PNPOQ9NVS9 261 aa13.18□□□□□ -0.3
VPS52-218ENST00000482399 WDR35Q9P2L0 1181 aa13.18□□□□□ -0.3
VPS52-218ENST00000482399 PLA2G4CQ9UP65 541 aa13.18□□□□□ -0.3
VPS52-218ENST00000482399 YDJCA8MPS7 323 aa13.17□□□□□ -0.3
VPS52-218ENST00000482399 PEX1O43933 1283 aa13.17□□□□□ -0.3
VPS52-218ENST00000482399 USP12O75317 370 aa13.17□□□□□ -0.3
VPS52-218ENST00000482399 PRKCBP05771 671 aa13.17□□□□□ -0.3
VPS52-218ENST00000482399 PYGLP06737 847 aa13.17□□□□□ -0.3
VPS52-218ENST00000482399 SOX11P35716 441 aa13.17□□□□□ -0.3
VPS52-218ENST00000482399 BBS12Q6ZW61 710 aa13.17□□□□□ -0.3
VPS52-218ENST00000482399 EGFL6Q8IUX8 553 aa13.17□□□□□ -0.3
VPS52-218ENST00000482399 SLC44A1Q8WWI5 657 aa13.17□□□□□ -0.3
VPS52-218ENST00000482399 PGLYRP2Q96PD5 576 aa13.17□□□□□ -0.3
VPS52-218ENST00000482399 RPF1Q9H9Y2 349 aaKnown RBP13.17□□□□□ -0.3
VPS52-218ENST00000482399 RSAD1Q9HA92 442 aa13.17□□□□□ -0.3
VPS52-218ENST00000482399 NRBP2Q9NSY0 501 aa13.17□□□□□ -0.3
VPS52-218ENST00000482399 PHLPP1O60346 1717 aa13.17□□□□□ -0.3
VPS52-218ENST00000482399 GOLGA8TH3BQL2 631 aa13.17□□□□□ -0.3
VPS52-218ENST00000482399 APOL1O14791 398 aa13.17□□□□□ -0.3
VPS52-218ENST00000482399 NUDT2P50583 147 aa13.17□□□□□ -0.3
VPS52-218ENST00000482399 OCRLQ01968 901 aa13.17□□□□□ -0.3
VPS52-218ENST00000482399 CNTN2Q02246 1040 aa13.17□□□□□ -0.3
VPS52-218ENST00000482399 PTP4A2Q12974 167 aa13.17□□□□□ -0.3
VPS52-218ENST00000482399 LBRQ14739 615 aaKnown RBP13.17□□□□□ -0.3
VPS52-218ENST00000482399 PRKD1Q15139 912 aaPredicted RBP13.17□□□□□ -0.3
VPS52-218ENST00000482399 PTAR1Q7Z6K3 402 aaPredicted RBP13.17□□□□□ -0.3
VPS52-218ENST00000482399 NCAPG2Q86XI2 1143 aa13.17□□□□□ -0.3
VPS52-218ENST00000482399 STKLD1Q8NE28 680 aa13.17□□□□□ -0.3
VPS52-218ENST00000482399 MOCOSQ96EN8 888 aa13.17□□□□□ -0.3
VPS52-218ENST00000482399 MRPL4Q9BYD3 311 aaKnown RBP13.17□□□□□ -0.3
VPS52-218ENST00000482399 PPCSQ9HAB8 311 aa13.17□□□□□ -0.3
VPS52-218ENST00000482399 LNPEPQ9UIQ6 1025 aa13.17□□□□□ -0.3
VPS52-218ENST00000482399 SPATA31A6Q5VVP1 1343 aa13.17□□□□□ -0.3
VPS52-218ENST00000482399 CAPN8A6NHC0 703 aa13.16□□□□□ -0.3
VPS52-218ENST00000482399 APOC4-APOC2K7ER74 178 aa13.16□□□□□ -0.3
VPS52-218ENST00000482399 RGL2O15211 777 aa13.16□□□□□ -0.3
VPS52-218ENST00000482399 OR6B1O95007 311 aa13.16□□□□□ -0.3
VPS52-218ENST00000482399 APOC2P02655 101 aa13.16□□□□□ -0.3
VPS52-218ENST00000482399 CSH1P0DML2 217 aa13.16□□□□□ -0.3
VPS52-218ENST00000482399 CSH2P0DML3 217 aa13.16□□□□□ -0.3
VPS52-218ENST00000482399 SDC4P31431 198 aa13.16□□□□□ -0.3
VPS52-218ENST00000482399 PKNOX1P55347 436 aa13.16□□□□□ -0.3
VPS52-218ENST00000482399 PPM1JQ5JR12 505 aa13.16□□□□□ -0.3
VPS52-218ENST00000482399 KIAA0319LQ8IZA0 1049 aa13.16□□□□□ -0.3
VPS52-218ENST00000482399 OR6Y1Q8NGX8 325 aa13.16□□□□□ -0.3
VPS52-218ENST00000482399 ADAM32Q8TC27 787 aa13.16□□□□□ -0.3
VPS52-218ENST00000482399 PTCD3Q96EY7 689 aaKnown RBP13.16□□□□□ -0.3
VPS52-218ENST00000482399 MPP4Q96JB8 637 aa13.16□□□□□ -0.3
VPS52-218ENST00000482399 NDNQ99608 321 aa13.16□□□□□ -0.3
VPS52-218ENST00000482399 APOL2Q9BQE5 337 aa13.16□□□□□ -0.3
VPS52-218ENST00000482399 EURLQ9NYK6 297 aa13.16□□□□□ -0.3
VPS52-218ENST00000482399 MYOCOSA0A1B0GUC4 107 aa13.16□□□□□ -0.3
VPS52-218ENST00000482399 WDR27A2RRH5 827 aa13.16□□□□□ -0.3
VPS52-218ENST00000482399 WDR46O15213 610 aaKnown RBP13.16□□□□□ -0.3
VPS52-218ENST00000482399 ATP9BO43861 1147 aa13.16□□□□□ -0.3
VPS52-218ENST00000482399 STAT5BP51692 787 aa13.16□□□□□ -0.3
VPS52-218ENST00000482399 AQP4P55087 323 aa13.16□□□□□ -0.3
VPS52-218ENST00000482399 CTC1Q2NKJ3 1217 aa13.16□□□□□ -0.3
VPS52-218ENST00000482399 HEATR6Q6AI08 1181 aaKnown RBP13.16□□□□□ -0.3
VPS52-218ENST00000482399 ARHGAP22Q7Z5H3 698 aa13.16□□□□□ -0.3
VPS52-218ENST00000482399 SCUBE3Q8IX30 993 aa13.16□□□□□ -0.3
VPS52-218ENST00000482399 MPP5Q8N3R9 675 aa13.16□□□□□ -0.3
VPS52-218ENST00000482399 ZNF398Q8TD17 642 aa13.16□□□□□ -0.3
VPS52-218ENST00000482399 TMA16Q96EY4 203 aaKnown RBP13.16□□□□□ -0.3
VPS52-218ENST00000482399 FBXL18Q96ME1 805 aa13.16□□□□□ -0.3
VPS52-218ENST00000482399 GORASP1Q9BQQ3 440 aa13.16□□□□□ -0.3
VPS52-218ENST00000482399 HAPLN2Q9GZV7 340 aa13.16□□□□□ -0.3
VPS52-218ENST00000482399 C17orf75Q9HAS0 396 aa13.16□□□□□ -0.3
VPS52-218ENST00000482399 PAK5Q9P286 719 aa13.16□□□□□ -0.3
VPS52-218ENST00000482399 SMAPO00193 183 aa13.16□□□□□ -0.3
VPS52-218ENST00000482399 OATP04181 439 aa13.16□□□□□ -0.3
VPS52-218ENST00000482399 ERBB2P04626 1255 aa13.16□□□□□ -0.3
VPS52-218ENST00000482399 STIP1P31948 543 aaKnown RBP13.16□□□□□ -0.3
VPS52-218ENST00000482399 RPS6KA3P51812 740 aa13.16□□□□□ -0.3
VPS52-218ENST00000482399 RSBN1LQ6PCB5 846 aaPredicted RBP13.16□□□□□ -0.3
VPS52-218ENST00000482399 B3GNT9Q6UX72 402 aa13.16□□□□□ -0.3
VPS52-218ENST00000482399 SATL1Q86VE3 508 aa13.16□□□□□ -0.3
VPS52-218ENST00000482399 NIM1KQ8IY84 436 aa13.16□□□□□ -0.3
VPS52-218ENST00000482399 C12orf29Q8N999 325 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms