RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 SPHK2Q9NRA0 654 aa19.58■□□□□ 0.72
CLK1-211ENST00000481641 TULP3O75386 442 aa19.57■□□□□ 0.72
CLK1-211ENST00000481641 ZNF806P0C7X5 589 aa19.57■□□□□ 0.72
CLK1-211ENST00000481641 TRIM21P19474 475 aaKnown RBP19.57■□□□□ 0.72
CLK1-211ENST00000481641 ATP5C1P36542 298 aaKnown RBP19.57■□□□□ 0.72
CLK1-211ENST00000481641 EIF2DP41214 584 aaKnown RBP19.57■□□□□ 0.72
CLK1-211ENST00000481641 GRIA2P42262 883 aa19.57■□□□□ 0.72
CLK1-211ENST00000481641 KIR2DL1P43626 348 aaPredicted RBP19.57■□□□□ 0.72
CLK1-211ENST00000481641 ANKRD40Q6AI12 368 aa19.57■□□□□ 0.72
CLK1-211ENST00000481641 ETFBKMTQ8IXQ9 262 aa19.57■□□□□ 0.72
CLK1-211ENST00000481641 FBXL13Q8NEE6 735 aa19.57■□□□□ 0.72
CLK1-211ENST00000481641 MDGA1Q8NFP4 955 aa19.57■□□□□ 0.72
CLK1-211ENST00000481641 DUSP16Q9BY84 665 aa19.57■□□□□ 0.72
CLK1-211ENST00000481641 CYLDQ9NQC7 956 aa19.57■□□□□ 0.72
CLK1-211ENST00000481641 RAB20Q9NX57 234 aa19.57■□□□□ 0.72
CLK1-211ENST00000481641 PCDHA5Q9Y5H7 936 aa19.57■□□□□ 0.72
CLK1-211ENST00000481641 A0A0A0MRY4 1105 aa19.56■□□□□ 0.72
CLK1-211ENST00000481641 TRIM49BA6NDI0 452 aa19.56■□□□□ 0.72
CLK1-211ENST00000481641 GOLGA6L4A6NEF3 574 aa19.56■□□□□ 0.72
CLK1-211ENST00000481641 HOXC11O43248 304 aaPredicted RBP19.56■□□□□ 0.72
CLK1-211ENST00000481641 RARGP13631 454 aa19.56■□□□□ 0.72
CLK1-211ENST00000481641 BCKDHBP21953 392 aa19.56■□□□□ 0.72
CLK1-211ENST00000481641 GBP1P32455 592 aa19.56■□□□□ 0.72
CLK1-211ENST00000481641 MPLP40238 635 aa19.56■□□□□ 0.72
CLK1-211ENST00000481641 KIF11P52732 1056 aa19.56■□□□□ 0.72
CLK1-211ENST00000481641 CBWD6Q4V339 395 aa19.56■□□□□ 0.72
CLK1-211ENST00000481641 DCAF17Q5H9S7 520 aaPredicted RBP19.56■□□□□ 0.72
CLK1-211ENST00000481641 CBWD3Q5JTY5 395 aa19.56■□□□□ 0.72
CLK1-211ENST00000481641 PLA2G2CQ5R387 149 aa19.56■□□□□ 0.72
CLK1-211ENST00000481641 CBWD5Q5RIA9 395 aa19.56■□□□□ 0.72
CLK1-211ENST00000481641 ZNF658Q5TYW1 1059 aaPredicted RBP19.56■□□□□ 0.72
CLK1-211ENST00000481641 TCERG1LQ5VWI1 586 aa19.56■□□□□ 0.72
CLK1-211ENST00000481641 BTBD8Q5XKL5 378 aa19.56■□□□□ 0.72
CLK1-211ENST00000481641 ISM2Q6H9L7 571 aa19.56■□□□□ 0.72
CLK1-211ENST00000481641 TCEAL6Q6IPX3 200 aa19.56■□□□□ 0.72
CLK1-211ENST00000481641 HTR3DQ70Z44 454 aa19.56■□□□□ 0.72
CLK1-211ENST00000481641 SCD5Q86SK9 330 aa19.56■□□□□ 0.72
CLK1-211ENST00000481641 RASSF3Q86WH2 238 aa19.56■□□□□ 0.72
CLK1-211ENST00000481641 SLC4A11Q8NBS3 891 aa19.56■□□□□ 0.72
CLK1-211ENST00000481641 TCEAL3Q969E4 200 aa19.56■□□□□ 0.72
CLK1-211ENST00000481641 CCDC34Q96HJ3 373 aa19.56■□□□□ 0.72
CLK1-211ENST00000481641 CISHQ9NSE2 258 aa19.56■□□□□ 0.72
CLK1-211ENST00000481641 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.56■□□□□ 0.72
CLK1-211ENST00000481641 RMND1Q9NWS8 449 aa19.56■□□□□ 0.72
CLK1-211ENST00000481641 NAGPAQ9UK23 515 aa19.56■□□□□ 0.72
CLK1-211ENST00000481641 THADAQ6YHU6 1953 aa19.55■□□□□ 0.72
CLK1-211ENST00000481641 TBC1D3BA6NDS4 549 aa19.55■□□□□ 0.72
CLK1-211ENST00000481641 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.55■□□□□ 0.72
CLK1-211ENST00000481641 ADAM23O75077 832 aa19.55■□□□□ 0.72
CLK1-211ENST00000481641 TNFRSF4P43489 277 aa19.55■□□□□ 0.72
CLK1-211ENST00000481641 RAD23BP54727 409 aa19.55■□□□□ 0.72
CLK1-211ENST00000481641 CREB5Q02930 508 aa19.55■□□□□ 0.72
CLK1-211ENST00000481641 ELF2Q15723 593 aa19.55■□□□□ 0.72
CLK1-211ENST00000481641 USP39Q53GS9 565 aaKnown RBP19.55■□□□□ 0.72
CLK1-211ENST00000481641 C10orf120Q5SQS8 335 aa19.55■□□□□ 0.72
CLK1-211ENST00000481641 TPGS1Q6ZTW0 290 aa19.55■□□□□ 0.72
CLK1-211ENST00000481641 C12orf50Q8NA57 414 aaPredicted RBP19.55■□□□□ 0.72
CLK1-211ENST00000481641 RLN3Q8WXF3 142 aa19.55■□□□□ 0.72
CLK1-211ENST00000481641 TMEM176AQ96HP8 235 aa19.55■□□□□ 0.72
CLK1-211ENST00000481641 CNOT6LQ96LI5 555 aaKnown RBP19.55■□□□□ 0.72
CLK1-211ENST00000481641 GSDMAQ96QA5 445 aa19.55■□□□□ 0.72
CLK1-211ENST00000481641 PNPLA8Q9NP80 782 aa19.55■□□□□ 0.72
CLK1-211ENST00000481641 DEC1Q9P2X7 70 aa19.55■□□□□ 0.72
CLK1-211ENST00000481641 HCN2Q9UL51 889 aa19.55■□□□□ 0.72
CLK1-211ENST00000481641 NEDD8-MDP1E9PL57 170 aa19.54■□□□□ 0.72
CLK1-211ENST00000481641 STX10O60499 249 aa19.54■□□□□ 0.72
CLK1-211ENST00000481641 RHOBTB1O94844 696 aa19.54■□□□□ 0.72
CLK1-211ENST00000481641 BECN1Q14457 450 aa19.54■□□□□ 0.72
CLK1-211ENST00000481641 ZC3H3Q8IXZ2 948 aaKnown RBP19.54■□□□□ 0.72
CLK1-211ENST00000481641 FRMD1Q8N878 549 aa19.54■□□□□ 0.72
CLK1-211ENST00000481641 SMARCE1Q969G3 411 aa19.54■□□□□ 0.72
CLK1-211ENST00000481641 TSG101Q99816 390 aa19.54■□□□□ 0.72
CLK1-211ENST00000481641 DUSP9Q99956 384 aaKnown RBP19.54■□□□□ 0.72
CLK1-211ENST00000481641 CIZ1Q9ULV3 898 aaPredicted RBP19.54■□□□□ 0.72
CLK1-211ENST00000481641 PCDHGA5Q9Y5G8 931 aa19.54■□□□□ 0.72
CLK1-211ENST00000481641 SMC2O95347 1197 aa19.53■□□□□ 0.72
CLK1-211ENST00000481641 WASP42768 502 aa19.53■□□□□ 0.72
CLK1-211ENST00000481641 COBLL1Q53SF7 1204 aa19.53■□□□□ 0.72
CLK1-211ENST00000481641 PPM1JQ5JR12 505 aa19.53■□□□□ 0.72
CLK1-211ENST00000481641 EOGTQ5NDL2 527 aa19.53■□□□□ 0.72
CLK1-211ENST00000481641 C10orf76Q5T2E6 689 aa19.53■□□□□ 0.72
CLK1-211ENST00000481641 CCDC186Q7Z3E2 898 aa19.53■□□□□ 0.72
CLK1-211ENST00000481641 MIB1Q86YT6 1006 aa19.53■□□□□ 0.72
CLK1-211ENST00000481641 SPATA20Q8TB22 786 aa19.53■□□□□ 0.72
CLK1-211ENST00000481641 BHMTQ93088 406 aa19.53■□□□□ 0.72
CLK1-211ENST00000481641 ERLEC1Q96DZ1 483 aa19.53■□□□□ 0.72
CLK1-211ENST00000481641 P2RY11Q96G91 374 aa19.53■□□□□ 0.72
CLK1-211ENST00000481641 BBS2Q9BXC9 721 aa19.53■□□□□ 0.72
CLK1-211ENST00000481641 DNAJC17Q9NVM6 304 aaKnown RBP19.53■□□□□ 0.72
CLK1-211ENST00000481641 DNMT3LQ9UJW3 386 aa19.53■□□□□ 0.72
CLK1-211ENST00000481641 LSM7Q9UK45 103 aaKnown RBP19.53■□□□□ 0.72
CLK1-211ENST00000481641 USP3Q9Y6I4 520 aa19.53■□□□□ 0.72
CLK1-211ENST00000481641 LAMA1P25391 3075 aa19.53■□□□□ 0.72
CLK1-211ENST00000481641 CNOT1A5YKK6 2376 aaKnown RBP19.52■□□□□ 0.72
CLK1-211ENST00000481641 NUP205Q92621 2012 aa19.52■□□□□ 0.72
CLK1-211ENST00000481641 TCRBV21S2A2A0A5A6 115 aa19.52■□□□□ 0.72
CLK1-211ENST00000481641 BCLAF3A2AJT9 711 aaKnown RBP19.52■□□□□ 0.72
CLK1-211ENST00000481641 TULP2O00295 520 aa19.52■□□□□ 0.72
CLK1-211ENST00000481641 SLC16A3O15427 465 aaKnown RBP19.52■□□□□ 0.72
CLK1-211ENST00000481641 FOXD2O60548 495 aaPredicted RBP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms