RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 GOLGA4Q13439 2230 aaKnown RBP18.41■□□□□ 0.54
RXRB-203ENST00000481441 FLNBO75369 2602 aaKnown RBP18.41■□□□□ 0.54
RXRB-203ENST00000481441 FRMD3A2A2Y4 597 aa18.4■□□□□ 0.54
RXRB-203ENST00000481441 ZNF233A6NK53 670 aa18.4■□□□□ 0.54
RXRB-203ENST00000481441 CACNG3O60359 315 aa18.4■□□□□ 0.54
RXRB-203ENST00000481441 GREM1O60565 184 aa18.4■□□□□ 0.54
RXRB-203ENST00000481441 PRPF6O94906 941 aaKnown RBP18.4■□□□□ 0.54
RXRB-203ENST00000481441 CST3P01034 146 aaPredicted RBP18.4■□□□□ 0.54
RXRB-203ENST00000481441 SURF1Q15526 300 aa18.4■□□□□ 0.54
RXRB-203ENST00000481441 TMPRSS7Q7RTY8 843 aa18.4■□□□□ 0.54
RXRB-203ENST00000481441 TRAPPC11Q7Z392 1133 aa18.4■□□□□ 0.54
RXRB-203ENST00000481441 WDR49Q8IV35 697 aa18.4■□□□□ 0.54
RXRB-203ENST00000481441 SCAMP5Q8TAC9 235 aa18.4■□□□□ 0.54
RXRB-203ENST00000481441 KCNK16Q96T55 309 aa18.4■□□□□ 0.54
RXRB-203ENST00000481441 NFE2L3Q9Y4A8 694 aa18.4■□□□□ 0.54
RXRB-203ENST00000481441 A0A1B0GTW7 788 aa18.39■□□□□ 0.53
RXRB-203ENST00000481441 DKK1O94907 266 aa18.39■□□□□ 0.53
RXRB-203ENST00000481441 ZDHHC11BP0C7U3 371 aa18.39■□□□□ 0.53
RXRB-203ENST00000481441 IRF1P10914 325 aa18.39■□□□□ 0.53
RXRB-203ENST00000481441 IDEP14735 1019 aa18.39■□□□□ 0.53
RXRB-203ENST00000481441 CD6P30203 668 aa18.39■□□□□ 0.53
RXRB-203ENST00000481441 SV2BQ7L1I2 683 aa18.39■□□□□ 0.53
RXRB-203ENST00000481441 B3GALNT2Q8NCR0 500 aa18.39■□□□□ 0.53
RXRB-203ENST00000481441 BAHD1Q8TBE0 780 aaPredicted RBP18.39■□□□□ 0.53
RXRB-203ENST00000481441 IL21RQ9HBE5 538 aa18.39■□□□□ 0.53
RXRB-203ENST00000481441 TOR4AQ9NXH8 423 aa18.39■□□□□ 0.53
RXRB-203ENST00000481441 CACNA2D2Q9NY47 1150 aa18.39■□□□□ 0.53
RXRB-203ENST00000481441 CCDC39Q9UFE4 941 aa18.39■□□□□ 0.53
RXRB-203ENST00000481441 KNL1Q8NG31 2342 aa18.38■□□□□ 0.53
RXRB-203ENST00000481441 FAM92AA1XBS5 289 aa18.38■□□□□ 0.53
RXRB-203ENST00000481441 NEDD8-MDP1E9PL57 170 aa18.38■□□□□ 0.53
RXRB-203ENST00000481441 GFRA2O00451 464 aa18.38■□□□□ 0.53
RXRB-203ENST00000481441 ZIC2O95409 532 aaPredicted RBP18.38■□□□□ 0.53
RXRB-203ENST00000481441 ZNF883P0CG24 379 aa18.38■□□□□ 0.53
RXRB-203ENST00000481441 TYRP14679 529 aa18.38■□□□□ 0.53
RXRB-203ENST00000481441 RRAGBQ5VZM2 374 aa18.38■□□□□ 0.53
RXRB-203ENST00000481441 KIAA1324Q6UXG2 1013 aaKnown RBP18.38■□□□□ 0.53
RXRB-203ENST00000481441 HTR3DQ70Z44 454 aa18.38■□□□□ 0.53
RXRB-203ENST00000481441 METTL3Q86U44 580 aaKnown RBP18.38■□□□□ 0.53
RXRB-203ENST00000481441 SPRYD3Q8NCJ5 442 aa18.38■□□□□ 0.53
RXRB-203ENST00000481441 SETD7Q8WTS6 366 aaKnown RBP18.38■□□□□ 0.53
RXRB-203ENST00000481441 SCFD1Q8WVM8 642 aa18.38■□□□□ 0.53
RXRB-203ENST00000481441 XPO6Q96QU8 1125 aaKnown RBP18.38■□□□□ 0.53
RXRB-203ENST00000481441 BBS2Q9BXC9 721 aa18.38■□□□□ 0.53
RXRB-203ENST00000481441 TRIM9Q9C026 710 aa18.38■□□□□ 0.53
RXRB-203ENST00000481441 WSB2Q9NYS7 404 aaPredicted RBP18.38■□□□□ 0.53
RXRB-203ENST00000481441 MARK1Q9P0L2 795 aa18.38■□□□□ 0.53
RXRB-203ENST00000481441 GMIPQ9P107 970 aa18.38■□□□□ 0.53
RXRB-203ENST00000481441 CABIN1Q9Y6J0 2220 aa18.38■□□□□ 0.53
RXRB-203ENST00000481441 A8MXQ7 604 aa18.37■□□□□ 0.53
RXRB-203ENST00000481441 WASH3PC4AMC7 463 aa18.37■□□□□ 0.53
RXRB-203ENST00000481441 CISD3P0C7P0 127 aa18.37■□□□□ 0.53
RXRB-203ENST00000481441 PGFP49763 221 aa18.37■□□□□ 0.53
RXRB-203ENST00000481441 SLC5A3P53794 718 aa18.37■□□□□ 0.53
RXRB-203ENST00000481441 BNC1Q01954 994 aa18.37■□□□□ 0.53
RXRB-203ENST00000481441 WDR72Q3MJ13 1102 aa18.37■□□□□ 0.53
RXRB-203ENST00000481441 DBX2Q6ZNG2 339 aa18.37■□□□□ 0.53
RXRB-203ENST00000481441 PAQR9Q6ZVX9 377 aa18.37■□□□□ 0.53
RXRB-203ENST00000481441 ZCCHC9Q8N567 271 aaKnown RBP18.37■□□□□ 0.53
RXRB-203ENST00000481441 GLIS3Q8NEA6 775 aa18.37■□□□□ 0.53
RXRB-203ENST00000481441 TOE1Q96GM8 510 aaKnown RBP18.37■□□□□ 0.53
RXRB-203ENST00000481441 PANK4Q9NVE7 773 aa18.37■□□□□ 0.53
RXRB-203ENST00000481441 USP36Q9P275 1121 aaKnown RBP18.37■□□□□ 0.53
RXRB-203ENST00000481441 WDR35Q9P2L0 1181 aa18.37■□□□□ 0.53
RXRB-203ENST00000481441 MYH10P35580 1976 aa18.37■□□□□ 0.53
RXRB-203ENST00000481441 EIF4E1BA6NMX2 242 aaKnown RBP18.36■□□□□ 0.53
RXRB-203ENST00000481441 MEI4A8MW99 385 aa18.36■□□□□ 0.53
RXRB-203ENST00000481441 CILPO75339 1184 aa18.36■□□□□ 0.53
RXRB-203ENST00000481441 ATXN1LP0C7T5 689 aaKnown RBP18.36■□□□□ 0.53
RXRB-203ENST00000481441 NCAM1P13591 858 aa18.36■□□□□ 0.53
RXRB-203ENST00000481441 TNNC1P63316 161 aa18.36■□□□□ 0.53
RXRB-203ENST00000481441 TPGS1Q6ZTW0 290 aa18.36■□□□□ 0.53
RXRB-203ENST00000481441 BRAPQ7Z569 592 aa18.36■□□□□ 0.53
RXRB-203ENST00000481441 FAM35AQ86V20 835 aa18.36■□□□□ 0.53
RXRB-203ENST00000481441 MARCH9Q86YJ5 346 aa18.36■□□□□ 0.53
RXRB-203ENST00000481441 CADM4Q8NFZ8 388 aa18.36■□□□□ 0.53
RXRB-203ENST00000481441 TMX3Q96JJ7 454 aa18.36■□□□□ 0.53
RXRB-203ENST00000481441 KLF16Q9BXK1 252 aaPredicted RBP18.36■□□□□ 0.53
RXRB-203ENST00000481441 GAREM1Q9H706 876 aa18.36■□□□□ 0.53
RXRB-203ENST00000481441 ITM2CQ9NQX7 267 aa18.36■□□□□ 0.53
RXRB-203ENST00000481441 TM7SF3Q9NS93 570 aa18.36■□□□□ 0.53
RXRB-203ENST00000481441 COMMD8Q9NX08 183 aa18.36■□□□□ 0.53
RXRB-203ENST00000481441 HSPBP1Q9NZL4 362 aa18.36■□□□□ 0.53
RXRB-203ENST00000481441 FBXO2Q9UK22 296 aaPredicted RBP18.36■□□□□ 0.53
RXRB-203ENST00000481441 FNDC3AQ9Y2H6 1198 aaKnown RBP18.36■□□□□ 0.53
RXRB-203ENST00000481441 SHROOM3Q8TF72 1996 aa18.35■□□□□ 0.53
RXRB-203ENST00000481441 TLR5O60602 858 aa18.35■□□□□ 0.53
RXRB-203ENST00000481441 STAU1O95793 577 aaKnown RBP18.35■□□□□ 0.53
RXRB-203ENST00000481441 CER1O95813 267 aa18.35■□□□□ 0.53
RXRB-203ENST00000481441 HOXD13P35453 343 aa18.35■□□□□ 0.53
RXRB-203ENST00000481441 FUT11Q495W5 492 aa18.35■□□□□ 0.53
RXRB-203ENST00000481441 ADAM32Q8TC27 787 aa18.35■□□□□ 0.53
RXRB-203ENST00000481441 GPR174Q9BXC1 333 aa18.35■□□□□ 0.53
RXRB-203ENST00000481441 NACA2Q9H009 215 aa18.35■□□□□ 0.53
RXRB-203ENST00000481441 MIR1-1HGQ9H1L0 117 aa18.35■□□□□ 0.53
RXRB-203ENST00000481441 PRDM16Q9HAZ2 1276 aa18.35■□□□□ 0.53
RXRB-203ENST00000481441 KIAA1586Q9HCI6 787 aa18.35■□□□□ 0.53
RXRB-203ENST00000481441 DMAP1Q9NPF5 467 aaPredicted RBP18.35■□□□□ 0.53
RXRB-203ENST00000481441 STON1Q9Y6Q2 735 aa18.35■□□□□ 0.53
RXRB-203ENST00000481441 ATP8B3O60423 1300 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms