RNA–Protein interactions for RNA: ENST00000480064.1

PBRM1-220, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 919 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-220ENST00000480064 DNMT3BQ9UBC3 853 aaKnown RBP6.82□□□□□ -1.32
PBRM1-220ENST00000480064 ZNF215Q9UL58 517 aaPredicted RBP6.82□□□□□ -1.32
PBRM1-220ENST00000480064 GDAQ9Y2T3 454 aa6.82□□□□□ -1.32
PBRM1-220ENST00000480064 TNPO2O14787 897 aaKnown RBP6.81□□□□□ -1.32
PBRM1-220ENST00000480064 TBCAO75347 108 aaKnown RBP6.81□□□□□ -1.32
PBRM1-220ENST00000480064 MLYCDO95822 493 aa6.81□□□□□ -1.32
PBRM1-220ENST00000480064 CSH1P0DML2 217 aa6.81□□□□□ -1.32
PBRM1-220ENST00000480064 CSH2P0DML3 217 aa6.81□□□□□ -1.32
PBRM1-220ENST00000480064 LAMP2P13473 410 aa6.81□□□□□ -1.32
PBRM1-220ENST00000480064 YY1P25490 414 aa6.81□□□□□ -1.32
PBRM1-220ENST00000480064 AFF3P51826 1226 aaKnown RBP6.81□□□□□ -1.32
PBRM1-220ENST00000480064 CDR1P51861 262 aa6.81□□□□□ -1.32
PBRM1-220ENST00000480064 LOXL3P58215 753 aa6.81□□□□□ -1.32
PBRM1-220ENST00000480064 TMEM266Q2M3C6 531 aa6.81□□□□□ -1.32
PBRM1-220ENST00000480064 ZNF569Q5MCW4 686 aa6.81□□□□□ -1.32
PBRM1-220ENST00000480064 MCTP2Q6DN12 878 aa6.81□□□□□ -1.32
PBRM1-220ENST00000480064 SLC22A25Q6T423 547 aa6.81□□□□□ -1.32
PBRM1-220ENST00000480064 SZRD1Q7Z422 152 aa6.81□□□□□ -1.32
PBRM1-220ENST00000480064 KDELC2Q7Z4H8 507 aa6.81□□□□□ -1.32
PBRM1-220ENST00000480064 PPP1R32Q7Z5V6 425 aa6.81□□□□□ -1.32
PBRM1-220ENST00000480064 GALNT13Q8IUC8 556 aa6.81□□□□□ -1.32
PBRM1-220ENST00000480064 CMTM4Q8IZR5 234 aa6.81□□□□□ -1.32
PBRM1-220ENST00000480064 KYQ8NBH2 561 aa6.81□□□□□ -1.32
PBRM1-220ENST00000480064 MZB1Q8WU39 189 aa6.81□□□□□ -1.32
PBRM1-220ENST00000480064 ATRIPQ8WXE1 791 aa6.81□□□□□ -1.32
PBRM1-220ENST00000480064 JAKMIP2Q96AA8 810 aa6.81□□□□□ -1.32
PBRM1-220ENST00000480064 KIF1BPQ96EK5 621 aa6.81□□□□□ -1.32
PBRM1-220ENST00000480064 EIF3CQ99613 913 aaKnown RBP6.81□□□□□ -1.32
PBRM1-220ENST00000480064 FUZQ9BT04 418 aa6.81□□□□□ -1.32
PBRM1-220ENST00000480064 ITPAQ9BY32 194 aa6.81□□□□□ -1.32
PBRM1-220ENST00000480064 SIL1Q9H173 461 aa6.81□□□□□ -1.32
PBRM1-220ENST00000480064 ISY1Q9ULR0 285 aaKnown RBP6.81□□□□□ -1.32
PBRM1-220ENST00000480064 USP22Q9UPT9 525 aa6.81□□□□□ -1.32
PBRM1-220ENST00000480064 SMTNL1A8MU46 457 aa6.8□□□□□ -1.32
PBRM1-220ENST00000480064 PTGES3LE9PB15 166 aa6.8□□□□□ -1.32
PBRM1-220ENST00000480064 POLRMTO00411 1230 aaKnown RBP6.8□□□□□ -1.32
PBRM1-220ENST00000480064 FOXD2O60548 495 aaPredicted RBP6.8□□□□□ -1.32
PBRM1-220ENST00000480064 MAGEA10P43363 369 aaPredicted RBP6.8□□□□□ -1.32
PBRM1-220ENST00000480064 CDK7P50613 346 aa6.8□□□□□ -1.32
PBRM1-220ENST00000480064 LILRA4P59901 499 aa6.8□□□□□ -1.32
PBRM1-220ENST00000480064 CAMK1Q14012 370 aa6.8□□□□□ -1.32
PBRM1-220ENST00000480064 TBRG1Q3YBR2 411 aa6.8□□□□□ -1.32
PBRM1-220ENST00000480064 ZNF484Q5JVG2 852 aa6.8□□□□□ -1.32
PBRM1-220ENST00000480064 AGBL4Q5VU57 503 aa6.8□□□□□ -1.32
PBRM1-220ENST00000480064 FRMD5Q7Z6J6 570 aa6.8□□□□□ -1.32
PBRM1-220ENST00000480064 B3GNT8Q7Z7M8 397 aa6.8□□□□□ -1.32
PBRM1-220ENST00000480064 PRPF39Q86UA1 669 aaKnown RBP6.8□□□□□ -1.32
PBRM1-220ENST00000480064 TRABD2AQ86V40 505 aa6.8□□□□□ -1.32
PBRM1-220ENST00000480064 REXO1L1PQ8IX06 675 aa6.8□□□□□ -1.32
PBRM1-220ENST00000480064 C17orf53Q8N3J3 647 aaPredicted RBP6.8□□□□□ -1.32
PBRM1-220ENST00000480064 TTC39CQ8N584 583 aa6.8□□□□□ -1.32
PBRM1-220ENST00000480064 PDPRQ8NCN5 879 aa6.8□□□□□ -1.32
PBRM1-220ENST00000480064 METTL6Q8TCB7 284 aa6.8□□□□□ -1.32
PBRM1-220ENST00000480064 KTI12Q96EK9 354 aaPredicted RBP6.8□□□□□ -1.32
PBRM1-220ENST00000480064 RPL10LQ96L21 214 aaKnown RBP6.8□□□□□ -1.32
PBRM1-220ENST00000480064 KLHL32Q96NJ5 620 aa6.8□□□□□ -1.32
PBRM1-220ENST00000480064 SYT3Q9BQG1 590 aa6.8□□□□□ -1.32
PBRM1-220ENST00000480064 NUDT22Q9BRQ3 303 aa6.8□□□□□ -1.32
PBRM1-220ENST00000480064 C11orf84Q9BUA3 381 aaPredicted RBP6.8□□□□□ -1.32
PBRM1-220ENST00000480064 KRTAP9-3Q9BYQ3 159 aa6.8□□□□□ -1.32
PBRM1-220ENST00000480064 FTOQ9C0B1 505 aaKnown RBP eCLIP6.8□□□□□ -1.32
PBRM1-220ENST00000480064 SERHL2Q9H4I8 314 aa6.8□□□□□ -1.32
PBRM1-220ENST00000480064 ERVK-5Q9HDB9 667 aa6.8□□□□□ -1.32
PBRM1-220ENST00000480064 CWC25Q9NXE8 425 aaPredicted RBP6.8□□□□□ -1.32
PBRM1-220ENST00000480064 LMTK3Q96Q04 1460 aa6.79□□□□□ -1.32
PBRM1-220ENST00000480064 VILLO15195 856 aa6.79□□□□□ -1.32
PBRM1-220ENST00000480064 WEE2P0C1S8 567 aa6.79□□□□□ -1.32
PBRM1-220ENST00000480064 CHRM3P20309 590 aa6.79□□□□□ -1.32
PBRM1-220ENST00000480064 PRKCHP24723 683 aa6.79□□□□□ -1.32
PBRM1-220ENST00000480064 ARL1P40616 181 aaPredicted RBP6.79□□□□□ -1.32
PBRM1-220ENST00000480064 PXNP49023 591 aaPredicted RBP6.79□□□□□ -1.32
PBRM1-220ENST00000480064 MTHFSP49914 203 aa6.79□□□□□ -1.32
PBRM1-220ENST00000480064 PTTG1IPP53801 180 aa6.79□□□□□ -1.32
PBRM1-220ENST00000480064 RPS3AP61247 264 aaKnown RBP6.79□□□□□ -1.32
PBRM1-220ENST00000480064 ATP2C1P98194 919 aaPredicted RBP6.79□□□□□ -1.32
PBRM1-220ENST00000480064 TBL3Q12788 808 aaKnown RBP6.79□□□□□ -1.32
PBRM1-220ENST00000480064 DCTN2Q13561 401 aaKnown RBP6.79□□□□□ -1.32
PBRM1-220ENST00000480064 RTP5Q14D33 572 aa6.79□□□□□ -1.32
PBRM1-220ENST00000480064 ZNF568Q3ZCX4 644 aa6.79□□□□□ -1.32
PBRM1-220ENST00000480064 ZMAT1Q5H9K5 638 aa6.79□□□□□ -1.32
PBRM1-220ENST00000480064 NAA16Q6N069 864 aaPredicted RBP6.79□□□□□ -1.32
PBRM1-220ENST00000480064 LARP4Q71RC2 724 aaKnown RBP eCLIP6.79□□□□□ -1.32
PBRM1-220ENST00000480064 GALNTL5Q7Z4T8 443 aa6.79□□□□□ -1.32
PBRM1-220ENST00000480064 LDHDQ86WU2 507 aa6.79□□□□□ -1.32
PBRM1-220ENST00000480064 FAM71DQ8N9W8 422 aa6.79□□□□□ -1.32
PBRM1-220ENST00000480064 MBD3L2Q8NHZ7 208 aaPredicted RBP6.79□□□□□ -1.32
PBRM1-220ENST00000480064 SLC35B2Q8TB61 432 aa6.79□□□□□ -1.32
PBRM1-220ENST00000480064 DNAJB14Q8TBM8 379 aa6.79□□□□□ -1.32
PBRM1-220ENST00000480064 FNIP1Q8TF40 1166 aa6.79□□□□□ -1.32
PBRM1-220ENST00000480064 USP6NLQ92738 828 aa6.79□□□□□ -1.32
PBRM1-220ENST00000480064 HIST1H2AAQ96QV6 131 aa6.79□□□□□ -1.32
PBRM1-220ENST00000480064 CARD11Q9BXL7 1154 aa6.79□□□□□ -1.32
PBRM1-220ENST00000480064 MAK16Q9BXY0 300 aaKnown RBP6.79□□□□□ -1.32
PBRM1-220ENST00000480064 CCDC134Q9H6E4 229 aa6.79□□□□□ -1.32
PBRM1-220ENST00000480064 L2HGDHQ9H9P8 463 aa6.79□□□□□ -1.32
PBRM1-220ENST00000480064 GRPEL1Q9HAV7 217 aa6.79□□□□□ -1.32
PBRM1-220ENST00000480064 FSCN3Q9NQT6 498 aa6.79□□□□□ -1.32
PBRM1-220ENST00000480064 FBXO34Q9NWN3 711 aa6.79□□□□□ -1.32
PBRM1-220ENST00000480064 CDYLQ9Y232 598 aa6.79□□□□□ -1.32
PBRM1-220ENST00000480064 LYVE1Q9Y5Y7 322 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms