RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 GRIN1Q05586 938 aa18.41■□□□□ 0.54
HMGN1-212ENST00000479586 DBX2Q6ZNG2 339 aa18.41■□□□□ 0.54
HMGN1-212ENST00000479586 DYMQ7RTS9 669 aa18.41■□□□□ 0.54
HMGN1-212ENST00000479586 KRI1Q8N9T8 703 aaKnown RBP18.41■□□□□ 0.54
HMGN1-212ENST00000479586 RASSF8Q8NHQ8 419 aa18.41■□□□□ 0.54
HMGN1-212ENST00000479586 SCFD1Q8WVM8 642 aa18.41■□□□□ 0.54
HMGN1-212ENST00000479586 LARP4BQ92615 738 aaKnown RBP18.41■□□□□ 0.54
HMGN1-212ENST00000479586 MMS19Q96T76 1030 aa18.41■□□□□ 0.54
HMGN1-212ENST00000479586 MRPL45Q9BRJ2 306 aaKnown RBP18.41■□□□□ 0.54
HMGN1-212ENST00000479586 CBWD1Q9BRT8 395 aa18.41■□□□□ 0.54
HMGN1-212ENST00000479586 TBC1D7Q9P0N9 293 aa18.41■□□□□ 0.54
HMGN1-212ENST00000479586 NFE2L3Q9Y4A8 694 aa18.41■□□□□ 0.54
HMGN1-212ENST00000479586 TK2O00142 265 aa18.4■□□□□ 0.54
HMGN1-212ENST00000479586 CLDN5O00501 218 aa18.4■□□□□ 0.54
HMGN1-212ENST00000479586 ATXN7O15265 892 aaPredicted RBP18.4■□□□□ 0.54
HMGN1-212ENST00000479586 BCAT2O15382 392 aaPredicted RBP18.4■□□□□ 0.54
HMGN1-212ENST00000479586 CACNG3O60359 315 aa18.4■□□□□ 0.54
HMGN1-212ENST00000479586 ITPKBP27987 946 aa18.4■□□□□ 0.54
HMGN1-212ENST00000479586 HECTD3Q5T447 861 aa18.4■□□□□ 0.54
HMGN1-212ENST00000479586 L1TD1Q5T7N2 865 aaKnown RBP18.4■□□□□ 0.54
HMGN1-212ENST00000479586 DCAF12L1Q5VU92 463 aa18.4■□□□□ 0.54
HMGN1-212ENST00000479586 PDCD7Q8N8D1 485 aaKnown RBP18.4■□□□□ 0.54
HMGN1-212ENST00000479586 PDZD8Q8NEN9 1154 aa18.4■□□□□ 0.54
HMGN1-212ENST00000479586 ANKRD36BP1Q96IX9 119 aa18.4■□□□□ 0.54
HMGN1-212ENST00000479586 ACCSQ96QU6 501 aa18.4■□□□□ 0.54
HMGN1-212ENST00000479586 DUSP9Q99956 384 aaKnown RBP18.4■□□□□ 0.54
HMGN1-212ENST00000479586 DPEP3Q9H4B8 488 aa18.4■□□□□ 0.54
HMGN1-212ENST00000479586 PCIF1Q9H4Z3 704 aa18.4■□□□□ 0.54
HMGN1-212ENST00000479586 MRPL44Q9H9J2 332 aaKnown RBP18.4■□□□□ 0.54
HMGN1-212ENST00000479586 INTS13Q9NVM9 706 aa18.4■□□□□ 0.54
HMGN1-212ENST00000479586 USP36Q9P275 1121 aaKnown RBP18.4■□□□□ 0.54
HMGN1-212ENST00000479586 CHORDC1Q9UHD1 332 aaPredicted RBP18.4■□□□□ 0.54
HMGN1-212ENST00000479586 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.4■□□□□ 0.54
HMGN1-212ENST00000479586 EXOC7Q9UPT5 735 aa18.4■□□□□ 0.54
HMGN1-212ENST00000479586 R3HCC1Q9Y3T6 440 aaKnown RBP18.4■□□□□ 0.54
HMGN1-212ENST00000479586 PTPRQQ9UMZ3 2332 aa18.4■□□□□ 0.54
HMGN1-212ENST00000479586 KCNJ18B7U540 433 aa18.39■□□□□ 0.53
HMGN1-212ENST00000479586 LDHAP00338 332 aaKnown RBP18.39■□□□□ 0.53
HMGN1-212ENST00000479586 TYRP14679 529 aa18.39■□□□□ 0.53
HMGN1-212ENST00000479586 GARTP22102 1010 aa18.39■□□□□ 0.53
HMGN1-212ENST00000479586 CASP5P51878 434 aa18.39■□□□□ 0.53
HMGN1-212ENST00000479586 SMAD1Q15797 465 aaKnown RBP18.39■□□□□ 0.53
HMGN1-212ENST00000479586 FUT11Q495W5 492 aa18.39■□□□□ 0.53
HMGN1-212ENST00000479586 CCDC157Q569K6 752 aa18.39■□□□□ 0.53
HMGN1-212ENST00000479586 IL27RAQ6UWB1 636 aa18.39■□□□□ 0.53
HMGN1-212ENST00000479586 NUP93Q8N1F7 819 aa18.39■□□□□ 0.53
HMGN1-212ENST00000479586 SCAMP5Q8TAC9 235 aa18.39■□□□□ 0.53
HMGN1-212ENST00000479586 BBS2Q9BXC9 721 aa18.39■□□□□ 0.53
HMGN1-212ENST00000479586 ELOVL4Q9GZR5 314 aa18.39■□□□□ 0.53
HMGN1-212ENST00000479586 SNX25Q9H3E2 840 aa18.39■□□□□ 0.53
HMGN1-212ENST00000479586 PCDHGB2Q9Y5G2 931 aa18.39■□□□□ 0.53
HMGN1-212ENST00000479586 A0A1B0GVT2 93 aa18.38■□□□□ 0.53
HMGN1-212ENST00000479586 PTPN1P18031 435 aaKnown RBP18.38■□□□□ 0.53
HMGN1-212ENST00000479586 GNL1P36915 607 aaPredicted RBP18.38■□□□□ 0.53
HMGN1-212ENST00000479586 TPGS1Q6ZTW0 290 aa18.38■□□□□ 0.53
HMGN1-212ENST00000479586 CADM4Q8NFZ8 388 aa18.38■□□□□ 0.53
HMGN1-212ENST00000479586 OR6B3Q8NGW1 331 aa18.38■□□□□ 0.53
HMGN1-212ENST00000479586 OVCA2Q8WZ82 227 aa18.38■□□□□ 0.53
HMGN1-212ENST00000479586 ZSCAN31Q96LW9 406 aaPredicted RBP18.38■□□□□ 0.53
HMGN1-212ENST00000479586 XPO6Q96QU8 1125 aaKnown RBP18.38■□□□□ 0.53
HMGN1-212ENST00000479586 B3GNT5Q9BYG0 378 aa18.38■□□□□ 0.53
HMGN1-212ENST00000479586 MKRN2Q9H000 416 aaKnown RBP18.38■□□□□ 0.53
HMGN1-212ENST00000479586 GMIPQ9P107 970 aa18.38■□□□□ 0.53
HMGN1-212ENST00000479586 EIF2B4Q9UI10 523 aaKnown RBP18.38■□□□□ 0.53
HMGN1-212ENST00000479586 SLCO1B1Q9Y6L6 691 aa18.38■□□□□ 0.53
HMGN1-212ENST00000479586 MUC22E2RYF6 1773 aaPredicted RBP18.37■□□□□ 0.53
HMGN1-212ENST00000479586 KNTC1P50748 2209 aa18.37■□□□□ 0.53
HMGN1-212ENST00000479586 METTL12A8MUP2 240 aa18.37■□□□□ 0.53
HMGN1-212ENST00000479586 GFRA2O00451 464 aa18.37■□□□□ 0.53
HMGN1-212ENST00000479586 GREM1O60565 184 aa18.37■□□□□ 0.53
HMGN1-212ENST00000479586 RTN3O95197 1032 aaPredicted RBP18.37■□□□□ 0.53
HMGN1-212ENST00000479586 GCNT3O95395 438 aa18.37■□□□□ 0.53
HMGN1-212ENST00000479586 TNNC2P02585 160 aa18.37■□□□□ 0.53
HMGN1-212ENST00000479586 TUBP50607 506 aa18.37■□□□□ 0.53
HMGN1-212ENST00000479586 PTPRNQ16849 979 aa18.37■□□□□ 0.53
HMGN1-212ENST00000479586 SNX30Q5VWJ9 437 aa18.37■□□□□ 0.53
HMGN1-212ENST00000479586 METTL3Q86U44 580 aaKnown RBP18.37■□□□□ 0.53
HMGN1-212ENST00000479586 SYCP3Q8IZU3 236 aa18.37■□□□□ 0.53
HMGN1-212ENST00000479586 KCNK16Q96T55 309 aa18.37■□□□□ 0.53
HMGN1-212ENST00000479586 FGFBP2Q9BYJ0 223 aa18.37■□□□□ 0.53
HMGN1-212ENST00000479586 PRORYQ9H606 182 aa18.37■□□□□ 0.53
HMGN1-212ENST00000479586 ITM2CQ9NQX7 267 aa18.37■□□□□ 0.53
HMGN1-212ENST00000479586 SEL1LQ9UBV2 794 aa18.37■□□□□ 0.53
HMGN1-212ENST00000479586 STON1Q9Y6Q2 735 aa18.37■□□□□ 0.53
HMGN1-212ENST00000479586 MGAQ8IWI9 3026 aa18.37■□□□□ 0.53
HMGN1-212ENST00000479586 PLK4O00444 970 aa18.36■□□□□ 0.53
HMGN1-212ENST00000479586 TNFSF14O43557 240 aa18.36■□□□□ 0.53
HMGN1-212ENST00000479586 CISD3P0C7P0 127 aa18.36■□□□□ 0.53
HMGN1-212ENST00000479586 DGKGP49619 791 aa18.36■□□□□ 0.53
HMGN1-212ENST00000479586 CSNK1EP49674 416 aaKnown RBP18.36■□□□□ 0.53
HMGN1-212ENST00000479586 PGFP49763 221 aa18.36■□□□□ 0.53
HMGN1-212ENST00000479586 TPMTP51580 245 aa18.36■□□□□ 0.53
HMGN1-212ENST00000479586 DHRS13Q6UX07 377 aa18.36■□□□□ 0.53
HMGN1-212ENST00000479586 ZNF605Q86T29 641 aa18.36■□□□□ 0.53
HMGN1-212ENST00000479586 ZNF843Q8N446 348 aa18.36■□□□□ 0.53
HMGN1-212ENST00000479586 C1orf216Q8TAB5 229 aa18.36■□□□□ 0.53
HMGN1-212ENST00000479586 TMEM131Q92545 1883 aa18.36■□□□□ 0.53
HMGN1-212ENST00000479586 BHMTQ93088 406 aa18.36■□□□□ 0.53
HMGN1-212ENST00000479586 KIF2CQ99661 725 aa18.36■□□□□ 0.53
HMGN1-212ENST00000479586 NACA2Q9H009 215 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms