RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 DCAF17Q5H9S7 520 aaPredicted RBP15.11■□□□□ 0.01
ATG4B-218ENST00000479554 TCERG1LQ5VWI1 586 aa15.11■□□□□ 0.01
ATG4B-218ENST00000479554 SFTPA1Q8IWL2 248 aa15.11■□□□□ 0.01
ATG4B-218ENST00000479554 TTC39CQ8N584 583 aa15.11■□□□□ 0.01
ATG4B-218ENST00000479554 C12orf50Q8NA57 414 aaPredicted RBP15.11■□□□□ 0.01
ATG4B-218ENST00000479554 SMARCE1Q969G3 411 aa15.11■□□□□ 0.01
ATG4B-218ENST00000479554 WBP2Q969T9 261 aa15.11■□□□□ 0.01
ATG4B-218ENST00000479554 FAXDC2Q96IV6 333 aa15.11■□□□□ 0.01
ATG4B-218ENST00000479554 ZC3H10Q96K80 434 aaKnown RBP15.11■□□□□ 0.01
ATG4B-218ENST00000479554 TPSD1Q9BZJ3 242 aa15.11■□□□□ 0.01
ATG4B-218ENST00000479554 CYLDQ9NQC7 956 aa15.11■□□□□ 0.01
ATG4B-218ENST00000479554 SPHK2Q9NRA0 654 aa15.11■□□□□ 0.01
ATG4B-218ENST00000479554 HOOK1Q9UJC3 728 aaKnown RBP15.11■□□□□ 0.01
ATG4B-218ENST00000479554 LSM7Q9UK45 103 aaKnown RBP15.11■□□□□ 0.01
ATG4B-218ENST00000479554 PCDHGA5Q9Y5G8 931 aa15.11■□□□□ 0.01
ATG4B-218ENST00000479554 A0A1W2PQH9 124 aa15.1■□□□□ 0.01
ATG4B-218ENST00000479554 SLC30A4O14863 429 aa15.1■□□□□ 0.01
ATG4B-218ENST00000479554 DCLK1O15075 740 aa15.1■□□□□ 0.01
ATG4B-218ENST00000479554 SLC16A3O15427 465 aaKnown RBP15.1■□□□□ 0.01
ATG4B-218ENST00000479554 RHOBTB1O94844 696 aa15.1■□□□□ 0.01
ATG4B-218ENST00000479554 KLF8O95600 359 aaPredicted RBP15.1■□□□□ 0.01
ATG4B-218ENST00000479554 TBX18O95935 607 aa15.1■□□□□ 0.01
ATG4B-218ENST00000479554 GBP1P32455 592 aa15.1■□□□□ 0.01
ATG4B-218ENST00000479554 MPLP40238 635 aa15.1■□□□□ 0.01
ATG4B-218ENST00000479554 TNFRSF4P43489 277 aa15.1■□□□□ 0.01
ATG4B-218ENST00000479554 KIF11P52732 1056 aa15.1■□□□□ 0.01
ATG4B-218ENST00000479554 FKBP3Q00688 224 aaKnown RBP15.1■□□□□ 0.01
ATG4B-218ENST00000479554 CRY1Q16526 586 aa15.1■□□□□ 0.01
ATG4B-218ENST00000479554 ANO4Q32M45 955 aa15.1■□□□□ 0.01
ATG4B-218ENST00000479554 HSF5Q4G112 596 aaPredicted RBP15.1■□□□□ 0.01
ATG4B-218ENST00000479554 USP39Q53GS9 565 aaKnown RBP15.1■□□□□ 0.01
ATG4B-218ENST00000479554 PPP1R26Q5T8A7 1209 aaPredicted RBP15.1■□□□□ 0.01
ATG4B-218ENST00000479554 ANO7Q6IWH7 933 aa15.1■□□□□ 0.01
ATG4B-218ENST00000479554 ETFBKMTQ8IXQ9 262 aa15.1■□□□□ 0.01
ATG4B-218ENST00000479554 ALLCQ8N6M5 410 aa15.1■□□□□ 0.01
ATG4B-218ENST00000479554 NAT16Q8N8M0 369 aa15.1■□□□□ 0.01
ATG4B-218ENST00000479554 TXNDC5Q8NBS9 432 aaKnown RBP15.1■□□□□ 0.01
ATG4B-218ENST00000479554 ENGASEQ8NFI3 743 aa15.1■□□□□ 0.01
ATG4B-218ENST00000479554 CNOT6LQ96LI5 555 aaKnown RBP15.1■□□□□ 0.01
ATG4B-218ENST00000479554 HEXIM2Q96MH2 286 aaKnown RBP15.1■□□□□ 0.01
ATG4B-218ENST00000479554 KLF16Q9BXK1 252 aaPredicted RBP15.1■□□□□ 0.01
ATG4B-218ENST00000479554 DUSP16Q9BY84 665 aa15.1■□□□□ 0.01
ATG4B-218ENST00000479554 GTPBP4Q9BZE4 634 aaKnown RBP15.1■□□□□ 0.01
ATG4B-218ENST00000479554 DUSP15Q9H1R2 295 aaPredicted RBP15.1■□□□□ 0.01
ATG4B-218ENST00000479554 NMUR1Q9HB89 426 aa15.1■□□□□ 0.01
ATG4B-218ENST00000479554 CISHQ9NSE2 258 aa15.1■□□□□ 0.01
ATG4B-218ENST00000479554 OSER1Q9NX31 292 aa15.1■□□□□ 0.01
ATG4B-218ENST00000479554 NAGPAQ9UK23 515 aa15.1■□□□□ 0.01
ATG4B-218ENST00000479554 SPAG17Q6Q759 2223 aa15.1■□□□□ 0.01
ATG4B-218ENST00000479554 RALGAPA1Q6GYQ0 2036 aa15.1■□□□□ 0.01
ATG4B-218ENST00000479554 DCDC2BA2VCK2 349 aa15.09■□□□□ 0.01
ATG4B-218ENST00000479554 GOLGA6L3A6NEY3 463 aa15.09■□□□□ 0.01
ATG4B-218ENST00000479554 GDF9O60383 454 aa15.09■□□□□ 0.01
ATG4B-218ENST00000479554 TULP3O75386 442 aa15.09■□□□□ 0.01
ATG4B-218ENST00000479554 ALDH1A2O94788 518 aa15.09■□□□□ 0.01
ATG4B-218ENST00000479554 ZNF806P0C7X5 589 aa15.09■□□□□ 0.01
ATG4B-218ENST00000479554 RARGP13631 454 aa15.09■□□□□ 0.01
ATG4B-218ENST00000479554 DEKP35659 375 aaKnown RBP15.09■□□□□ 0.01
ATG4B-218ENST00000479554 PSEN1P49768 467 aa15.09■□□□□ 0.01
ATG4B-218ENST00000479554 LRRC63Q05C16 580 aa15.09■□□□□ 0.01
ATG4B-218ENST00000479554 SF3A2Q15428 464 aaKnown RBP15.09■□□□□ 0.01
ATG4B-218ENST00000479554 CBWD6Q4V339 395 aa15.09■□□□□ 0.01
ATG4B-218ENST00000479554 CBWD3Q5JTY5 395 aa15.09■□□□□ 0.01
ATG4B-218ENST00000479554 EOGTQ5NDL2 527 aa15.09■□□□□ 0.01
ATG4B-218ENST00000479554 CBWD5Q5RIA9 395 aa15.09■□□□□ 0.01
ATG4B-218ENST00000479554 C10orf120Q5SQS8 335 aa15.09■□□□□ 0.01
ATG4B-218ENST00000479554 ANKRD40Q6AI12 368 aa15.09■□□□□ 0.01
ATG4B-218ENST00000479554 KLHDC10Q6PID8 442 aa15.09■□□□□ 0.01
ATG4B-218ENST00000479554 NUDT18Q6ZVK8 323 aa15.09■□□□□ 0.01
ATG4B-218ENST00000479554 HTR3DQ70Z44 454 aa15.09■□□□□ 0.01
ATG4B-218ENST00000479554 CCDC186Q7Z3E2 898 aa15.09■□□□□ 0.01
ATG4B-218ENST00000479554 TADA2BQ86TJ2 420 aa15.09■□□□□ 0.01
ATG4B-218ENST00000479554 C11orf74Q86VG3 221 aa15.09■□□□□ 0.01
ATG4B-218ENST00000479554 RASSF3Q86WH2 238 aa15.09■□□□□ 0.01
ATG4B-218ENST00000479554 TTC30AQ86WT1 665 aa15.09■□□□□ 0.01
ATG4B-218ENST00000479554 TMEM25Q86YD3 366 aa15.09■□□□□ 0.01
ATG4B-218ENST00000479554 ZC3H3Q8IXZ2 948 aaKnown RBP15.09■□□□□ 0.01
ATG4B-218ENST00000479554 PHTF2Q8N3S3 785 aa15.09■□□□□ 0.01
ATG4B-218ENST00000479554 IL17RCQ8NAC3 791 aa15.09■□□□□ 0.01
ATG4B-218ENST00000479554 SLC4A11Q8NBS3 891 aa15.09■□□□□ 0.01
ATG4B-218ENST00000479554 MDGA1Q8NFP4 955 aa15.09■□□□□ 0.01
ATG4B-218ENST00000479554 ERCC4Q92889 916 aaPredicted RBP15.09■□□□□ 0.01
ATG4B-218ENST00000479554 TMEM176AQ96HP8 235 aa15.09■□□□□ 0.01
ATG4B-218ENST00000479554 ARID3AQ99856 593 aa15.09■□□□□ 0.01
ATG4B-218ENST00000479554 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.09■□□□□ 0.01
ATG4B-218ENST00000479554 DEC1Q9P2X7 70 aa15.09■□□□□ 0.01
ATG4B-218ENST00000479554 A0A0A0MRY4 1105 aa15.08■□□□□ 0
ATG4B-218ENST00000479554 TRIM49BA6NDI0 452 aa15.08■□□□□ 0
ATG4B-218ENST00000479554 TBC1D3BA6NDS4 549 aa15.08■□□□□ 0
ATG4B-218ENST00000479554 SGK1O00141 431 aa15.08■□□□□ 0
ATG4B-218ENST00000479554 MDM4O15151 490 aa15.08■□□□□ 0
ATG4B-218ENST00000479554 GREM1O60565 184 aa15.08■□□□□ 0
ATG4B-218ENST00000479554 RALAP11233 206 aa15.08■□□□□ 0
ATG4B-218ENST00000479554 KIR2DL1P43626 348 aaPredicted RBP15.08■□□□□ 0
ATG4B-218ENST00000479554 PMS1P54277 932 aaKnown RBP15.08■□□□□ 0
ATG4B-218ENST00000479554 RAD23BP54727 409 aa15.08■□□□□ 0
ATG4B-218ENST00000479554 SLC8A3P57103 927 aa15.08■□□□□ 0
ATG4B-218ENST00000479554 STIM1Q13586 685 aa15.08■□□□□ 0
ATG4B-218ENST00000479554 PLA2G2CQ5R387 149 aa15.08■□□□□ 0
ATG4B-218ENST00000479554 TMEM92Q6UXU6 159 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms