RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 H3BNC9 293 aa8.19□□□□□ -1.1
GAPVD1-217ENST00000479511 TSPAN3O60637 253 aa8.19□□□□□ -1.1
GAPVD1-217ENST00000479511 CBFA2T3O75081 653 aa8.19□□□□□ -1.1
GAPVD1-217ENST00000479511 MYCLP12524 364 aaPredicted RBP8.19□□□□□ -1.1
GAPVD1-217ENST00000479511 YY1P25490 414 aa8.19□□□□□ -1.1
GAPVD1-217ENST00000479511 ZEB1P37275 1124 aaPredicted RBP8.19□□□□□ -1.1
GAPVD1-217ENST00000479511 CDK7P50613 346 aa8.19□□□□□ -1.1
GAPVD1-217ENST00000479511 PIGFQ07326 219 aa8.19□□□□□ -1.1
GAPVD1-217ENST00000479511 NRN1LQ496H8 165 aa8.19□□□□□ -1.1
GAPVD1-217ENST00000479511 DGAT2L7PQ6IED9 249 aa8.19□□□□□ -1.1
GAPVD1-217ENST00000479511 TMCO3Q6UWJ1 677 aa8.19□□□□□ -1.1
GAPVD1-217ENST00000479511 TMEM108Q6UXF1 575 aa8.19□□□□□ -1.1
GAPVD1-217ENST00000479511 TRABD2AQ86V40 505 aa8.19□□□□□ -1.1
GAPVD1-217ENST00000479511 ARMC8Q8IUR7 673 aa8.19□□□□□ -1.1
GAPVD1-217ENST00000479511 SPARTQ8N0X7 666 aa8.19□□□□□ -1.1
GAPVD1-217ENST00000479511 LINS1Q8NG48 757 aa8.19□□□□□ -1.1
GAPVD1-217ENST00000479511 MBD3L2Q8NHZ7 208 aaPredicted RBP8.19□□□□□ -1.1
GAPVD1-217ENST00000479511 HIST1H2AAQ96QV6 131 aa8.19□□□□□ -1.1
GAPVD1-217ENST00000479511 WDR24Q96S15 920 aa8.19□□□□□ -1.1
GAPVD1-217ENST00000479511 NUDT22Q9BRQ3 303 aa8.19□□□□□ -1.1
GAPVD1-217ENST00000479511 PHF7Q9BWX1 381 aaPredicted RBP8.19□□□□□ -1.1
GAPVD1-217ENST00000479511 PLEKHA2Q9HB19 425 aa8.19□□□□□ -1.1
GAPVD1-217ENST00000479511 VPS28Q9UK41 221 aa8.19□□□□□ -1.1
GAPVD1-217ENST00000479511 NDRG4Q9ULP0 352 aaKnown RBP8.19□□□□□ -1.1
GAPVD1-217ENST00000479511 HDAC5Q9UQL6 1122 aa8.19□□□□□ -1.1
GAPVD1-217ENST00000479511 ARHGEF40Q8TER5 1519 aa8.19□□□□□ -1.1
GAPVD1-217ENST00000479511 PMS2P1A4D2B8 440 aa8.18□□□□□ -1.1
GAPVD1-217ENST00000479511 PRR5-ARHGAP8B1AHC4 643 aa8.18□□□□□ -1.1
GAPVD1-217ENST00000479511 SEMA7AO75326 666 aa8.18□□□□□ -1.1
GAPVD1-217ENST00000479511 SGPL1O95470 568 aa8.18□□□□□ -1.1
GAPVD1-217ENST00000479511 MLYCDO95822 493 aa8.18□□□□□ -1.1
GAPVD1-217ENST00000479511 CSF1RP07333 972 aa8.18□□□□□ -1.1
GAPVD1-217ENST00000479511 ALOX12P18054 663 aa8.18□□□□□ -1.1
GAPVD1-217ENST00000479511 HTR7P34969 479 aa8.18□□□□□ -1.1
GAPVD1-217ENST00000479511 GGT5P36269 586 aa8.18□□□□□ -1.1
GAPVD1-217ENST00000479511 PGDP52209 483 aa8.18□□□□□ -1.1
GAPVD1-217ENST00000479511 NFIXQ14938 502 aa8.18□□□□□ -1.1
GAPVD1-217ENST00000479511 GPR68Q15743 365 aa8.18□□□□□ -1.1
GAPVD1-217ENST00000479511 LRRC24Q50LG9 513 aa8.18□□□□□ -1.1
GAPVD1-217ENST00000479511 CFAP58Q5T655 872 aa8.18□□□□□ -1.1
GAPVD1-217ENST00000479511 FAM111BQ6SJ93 734 aa8.18□□□□□ -1.1
GAPVD1-217ENST00000479511 SYNE3Q6ZMZ3 975 aa8.18□□□□□ -1.1
GAPVD1-217ENST00000479511 SYT12Q8IV01 421 aa8.18□□□□□ -1.1
GAPVD1-217ENST00000479511 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.18□□□□□ -1.1
GAPVD1-217ENST00000479511 ZNF483Q8TF39 744 aaPredicted RBP8.18□□□□□ -1.1
GAPVD1-217ENST00000479511 APOPT1Q96IL0 206 aa8.18□□□□□ -1.1
GAPVD1-217ENST00000479511 TIGD1Q96MW7 591 aa8.18□□□□□ -1.1
GAPVD1-217ENST00000479511 ALDH8A1Q9H2A2 487 aaPredicted RBP8.18□□□□□ -1.1
GAPVD1-217ENST00000479511 NTMQ9P121 344 aa8.18□□□□□ -1.1
GAPVD1-217ENST00000479511 CTTNBP2NLQ9P2B4 639 aa8.18□□□□□ -1.1
GAPVD1-217ENST00000479511 HSFX1Q9UBD0 423 aa8.18□□□□□ -1.1
GAPVD1-217ENST00000479511 USP22Q9UPT9 525 aa8.18□□□□□ -1.1
GAPVD1-217ENST00000479511 PTPRKQ15262 1439 aa8.18□□□□□ -1.1
GAPVD1-217ENST00000479511 AKNAQ7Z591 1439 aa8.18□□□□□ -1.1
GAPVD1-217ENST00000479511 SLC38A8A6NNN8 435 aa8.17□□□□□ -1.1
GAPVD1-217ENST00000479511 P4HA2O15460 535 aa8.17□□□□□ -1.1
GAPVD1-217ENST00000479511 F9P00740 461 aa8.17□□□□□ -1.1
GAPVD1-217ENST00000479511 SLC3A2P08195 630 aaKnown RBP8.17□□□□□ -1.1
GAPVD1-217ENST00000479511 GCSHP23434 173 aa8.17□□□□□ -1.1
GAPVD1-217ENST00000479511 PSMC2P35998 433 aaKnown RBP8.17□□□□□ -1.1
GAPVD1-217ENST00000479511 PGM1P36871 562 aa8.17□□□□□ -1.1
GAPVD1-217ENST00000479511 MCM2P49736 904 aa8.17□□□□□ -1.1
GAPVD1-217ENST00000479511 ARF3P61204 181 aaPredicted RBP8.17□□□□□ -1.1
GAPVD1-217ENST00000479511 ADAM17P78536 824 aa8.17□□□□□ -1.1
GAPVD1-217ENST00000479511 ARF1P84077 181 aaKnown RBP8.17□□□□□ -1.1
GAPVD1-217ENST00000479511 MC2RQ01718 297 aa8.17□□□□□ -1.1
GAPVD1-217ENST00000479511 CSHL1Q14406 222 aa8.17□□□□□ -1.1
GAPVD1-217ENST00000479511 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.17□□□□□ -1.1
GAPVD1-217ENST00000479511 FAM83AQ86UY5 434 aa8.17□□□□□ -1.1
GAPVD1-217ENST00000479511 SUN3Q8TAQ9 357 aa8.17□□□□□ -1.1
GAPVD1-217ENST00000479511 ASB2Q96Q27 587 aa8.17□□□□□ -1.1
GAPVD1-217ENST00000479511 CPPED1Q9BRF8 314 aaPredicted RBP8.17□□□□□ -1.1
GAPVD1-217ENST00000479511 PTDSS2Q9BVG9 487 aa8.17□□□□□ -1.1
GAPVD1-217ENST00000479511 HERC2P3Q9BVR0 1158 aa8.17□□□□□ -1.1
GAPVD1-217ENST00000479511 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.17□□□□□ -1.1
GAPVD1-217ENST00000479511 POGKQ9P215 609 aa8.17□□□□□ -1.1
GAPVD1-217ENST00000479511 CAMK2AQ9UQM7 478 aa8.17□□□□□ -1.1
GAPVD1-217ENST00000479511 RCE1Q9Y256 329 aa8.17□□□□□ -1.1
GAPVD1-217ENST00000479511 PIAS3Q9Y6X2 628 aa8.17□□□□□ -1.1
GAPVD1-217ENST00000479511 A0A1B0GTL3 188 aa8.16□□□□□ -1.1
GAPVD1-217ENST00000479511 TOR1BO14657 336 aa8.16□□□□□ -1.1
GAPVD1-217ENST00000479511 DNTTP04053 509 aa8.16□□□□□ -1.1
GAPVD1-217ENST00000479511 SPATA31D3P0C874 917 aa8.16□□□□□ -1.1
GAPVD1-217ENST00000479511 UQCRC1P31930 480 aa8.16□□□□□ -1.1
GAPVD1-217ENST00000479511 RGS2P41220 211 aa8.16□□□□□ -1.1
GAPVD1-217ENST00000479511 ZBED6P86452 979 aa8.16□□□□□ -1.1
GAPVD1-217ENST00000479511 SATB1Q01826 763 aa8.16□□□□□ -1.1
GAPVD1-217ENST00000479511 ZNF844Q08AG5 666 aa8.16□□□□□ -1.1
GAPVD1-217ENST00000479511 TDGQ13569 410 aa8.16□□□□□ -1.1
GAPVD1-217ENST00000479511 CUL4AQ13619 759 aa8.16□□□□□ -1.1
GAPVD1-217ENST00000479511 TBCEQ15813 527 aaPredicted RBP8.16□□□□□ -1.1
GAPVD1-217ENST00000479511 PRICKLE4Q2TBC4 344 aa8.16□□□□□ -1.1
GAPVD1-217ENST00000479511 FAM69AQ5T7M9 428 aa8.16□□□□□ -1.1
GAPVD1-217ENST00000479511 MFSD4BQ5TF39 518 aa8.16□□□□□ -1.1
GAPVD1-217ENST00000479511 METRNLQ641Q3 311 aa8.16□□□□□ -1.1
GAPVD1-217ENST00000479511 SPATA31D4Q6ZUB0 917 aa8.16□□□□□ -1.1
GAPVD1-217ENST00000479511 PIK3AP1Q6ZUJ8 805 aa8.16□□□□□ -1.1
GAPVD1-217ENST00000479511 LRRC8DQ7L1W4 858 aa8.16□□□□□ -1.1
GAPVD1-217ENST00000479511 TTC30AQ86WT1 665 aa8.16□□□□□ -1.1
GAPVD1-217ENST00000479511 FAM71DQ8N9W8 422 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms