RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 MAGEA9P43362 315 aa16.37■□□□□ 0.21
HMGA1-206ENST00000478214 RPS9P46781 194 aaKnown RBP16.37■□□□□ 0.21
HMGA1-206ENST00000478214 YWHAGP61981 247 aaKnown RBP eCLIP16.37■□□□□ 0.21
HMGA1-206ENST00000478214 ANGPT1Q15389 498 aa16.37■□□□□ 0.21
HMGA1-206ENST00000478214 KLHDC7AQ5VTJ3 777 aa16.37■□□□□ 0.21
HMGA1-206ENST00000478214 KLHDC10Q6PID8 442 aa16.37■□□□□ 0.21
HMGA1-206ENST00000478214 C1orf210Q8IVY1 113 aa16.37■□□□□ 0.21
HMGA1-206ENST00000478214 ADGRG2Q8IZP9 1017 aa16.37■□□□□ 0.21
HMGA1-206ENST00000478214 SIX6OS1Q8N1H7 587 aa16.37■□□□□ 0.21
HMGA1-206ENST00000478214 ARHGAP18Q8N392 663 aa16.37■□□□□ 0.21
HMGA1-206ENST00000478214 ZNF276Q8N554 614 aa16.37■□□□□ 0.21
HMGA1-206ENST00000478214 ZNF606Q8WXB4 792 aa16.37■□□□□ 0.21
HMGA1-206ENST00000478214 FAM86C1Q9NVL1 165 aa16.37■□□□□ 0.21
HMGA1-206ENST00000478214 DNMT3LQ9UJW3 386 aa16.37■□□□□ 0.21
HMGA1-206ENST00000478214 YJEFN3A6XGL0 299 aa16.36■□□□□ 0.21
HMGA1-206ENST00000478214 E7ENQ6 273 aa16.36■□□□□ 0.21
HMGA1-206ENST00000478214 GREM1O60565 184 aa16.36■□□□□ 0.21
HMGA1-206ENST00000478214 CYP17A1P05093 508 aa16.36■□□□□ 0.21
HMGA1-206ENST00000478214 ZNF18P17022 549 aa16.36■□□□□ 0.21
HMGA1-206ENST00000478214 GPD2P43304 727 aa16.36■□□□□ 0.21
HMGA1-206ENST00000478214 COPB1P53618 953 aaKnown RBP16.36■□□□□ 0.21
HMGA1-206ENST00000478214 AMPD2Q01433 879 aa16.36■□□□□ 0.21
HMGA1-206ENST00000478214 EFEMP1Q12805 493 aa16.36■□□□□ 0.21
HMGA1-206ENST00000478214 NR1H3Q13133 447 aa16.36■□□□□ 0.21
HMGA1-206ENST00000478214 MIB1Q86YT6 1006 aa16.36■□□□□ 0.21
HMGA1-206ENST00000478214 BBS7Q8IWZ6 715 aa16.36■□□□□ 0.21
HMGA1-206ENST00000478214 HSFY1Q96LI6 401 aa16.36■□□□□ 0.21
HMGA1-206ENST00000478214 NAT10Q9H0A0 1025 aaKnown RBP16.36■□□□□ 0.21
HMGA1-206ENST00000478214 HSD3B7Q9H2F3 369 aa16.36■□□□□ 0.21
HMGA1-206ENST00000478214 CHRDQ9H2X0 955 aa16.36■□□□□ 0.21
HMGA1-206ENST00000478214 FBRSL1Q9HCM7 1045 aaKnown RBP16.36■□□□□ 0.21
HMGA1-206ENST00000478214 SPATA6Q9NWH7 488 aaPredicted RBP16.36■□□□□ 0.21
HMGA1-206ENST00000478214 TBC1D14Q9P2M4 693 aa16.36■□□□□ 0.21
HMGA1-206ENST00000478214 FHOD1Q9Y613 1164 aa16.36■□□□□ 0.21
HMGA1-206ENST00000478214 HELZP42694 1942 aaKnown RBP16.35■□□□□ 0.21
HMGA1-206ENST00000478214 TRDMT1O14717 391 aaKnown RBP16.35■□□□□ 0.21
HMGA1-206ENST00000478214 MED7O43513 233 aa16.35■□□□□ 0.21
HMGA1-206ENST00000478214 TPM2P07951 284 aa16.35■□□□□ 0.21
HMGA1-206ENST00000478214 PLA2G5P39877 138 aa16.35■□□□□ 0.21
HMGA1-206ENST00000478214 KLK7P49862 253 aa16.35■□□□□ 0.21
HMGA1-206ENST00000478214 GALK1P51570 392 aa16.35■□□□□ 0.21
HMGA1-206ENST00000478214 DAOAP59103 153 aa16.35■□□□□ 0.21
HMGA1-206ENST00000478214 MTAPQ13126 283 aa16.35■□□□□ 0.21
HMGA1-206ENST00000478214 RAPGEF1Q13905 1077 aa16.35■□□□□ 0.21
HMGA1-206ENST00000478214 CCINQ13939 588 aa16.35■□□□□ 0.21
HMGA1-206ENST00000478214 LRRC32Q14392 662 aa16.35■□□□□ 0.21
HMGA1-206ENST00000478214 GAS6Q14393 721 aa16.35■□□□□ 0.21
HMGA1-206ENST00000478214 DRAP1Q14919 205 aaPredicted RBP16.35■□□□□ 0.21
HMGA1-206ENST00000478214 DHCR24Q15392 516 aa16.35■□□□□ 0.21
HMGA1-206ENST00000478214 GAB4Q2WGN9 574 aa16.35■□□□□ 0.21
HMGA1-206ENST00000478214 TMEM196Q5HYL7 178 aa16.35■□□□□ 0.21
HMGA1-206ENST00000478214 BSPRYQ5W0U4 402 aa16.35■□□□□ 0.21
HMGA1-206ENST00000478214 FSTL4Q6MZW2 842 aa16.35■□□□□ 0.21
HMGA1-206ENST00000478214 RHBDF2Q6PJF5 856 aa16.35■□□□□ 0.21
HMGA1-206ENST00000478214 RSRC2Q7L4I2 434 aaKnown RBP16.35■□□□□ 0.21
HMGA1-206ENST00000478214 TADA2BQ86TJ2 420 aa16.35■□□□□ 0.21
HMGA1-206ENST00000478214 FAM71AQ8IYT1 594 aa16.35■□□□□ 0.21
HMGA1-206ENST00000478214 MAML2Q8IZL2 1156 aaPredicted RBP16.35■□□□□ 0.21
HMGA1-206ENST00000478214 ATOH1Q92858 354 aaPredicted RBP16.35■□□□□ 0.21
HMGA1-206ENST00000478214 FAM122AQ96E09 287 aa16.35■□□□□ 0.21
HMGA1-206ENST00000478214 CDK5RAP1Q96SZ6 601 aaKnown RBP16.35■□□□□ 0.21
HMGA1-206ENST00000478214 CNGB3Q9NQW8 809 aa16.35■□□□□ 0.21
HMGA1-206ENST00000478214 LIMA1Q9UHB6 759 aaKnown RBP16.35■□□□□ 0.21
HMGA1-206ENST00000478214 CYTH4Q9UIA0 394 aa16.35■□□□□ 0.21
HMGA1-206ENST00000478214 RASAL2Q9UJF2 1139 aa16.35■□□□□ 0.21
HMGA1-206ENST00000478214 MYO16Q9Y6X6 1858 aa16.35■□□□□ 0.21
HMGA1-206ENST00000478214 ATP1A3P13637 1013 aa16.34■□□□□ 0.21
HMGA1-206ENST00000478214 UCHL3P15374 230 aa16.34■□□□□ 0.21
HMGA1-206ENST00000478214 CDK11BP21127 795 aaKnown RBP16.34■□□□□ 0.21
HMGA1-206ENST00000478214 CLCN1P35523 988 aa16.34■□□□□ 0.21
HMGA1-206ENST00000478214 PTK2Q05397 1052 aa16.34■□□□□ 0.21
HMGA1-206ENST00000478214 GOLGA8FQ08AF8 430 aa16.34■□□□□ 0.21
HMGA1-206ENST00000478214 GOLGA8DPQ0D2H9 430 aa16.34■□□□□ 0.21
HMGA1-206ENST00000478214 MEA1Q16626 185 aa16.34■□□□□ 0.21
HMGA1-206ENST00000478214 DGKKQ5KSL6 1271 aa16.34■□□□□ 0.21
HMGA1-206ENST00000478214 LY6G5CQ5SRR4 150 aa16.34■□□□□ 0.21
HMGA1-206ENST00000478214 FKBP15Q5T1M5 1219 aa16.34■□□□□ 0.21
HMGA1-206ENST00000478214 BTBD8Q5XKL5 378 aa16.34■□□□□ 0.21
HMGA1-206ENST00000478214 Q6ZS52 159 aa16.34■□□□□ 0.21
HMGA1-206ENST00000478214 HTR3DQ70Z44 454 aa16.34■□□□□ 0.21
HMGA1-206ENST00000478214 SLC47A2Q86VL8 602 aa16.34■□□□□ 0.21
HMGA1-206ENST00000478214 SCML4Q8N228 414 aa16.34■□□□□ 0.21
HMGA1-206ENST00000478214 ANKRD20A12PQ8NF67 263 aa16.34■□□□□ 0.21
HMGA1-206ENST00000478214 CLEC4CQ8WTT0 213 aa16.34■□□□□ 0.21
HMGA1-206ENST00000478214 EDEM1Q92611 657 aa16.34■□□□□ 0.21
HMGA1-206ENST00000478214 OTUB2Q96DC9 234 aa16.34■□□□□ 0.21
HMGA1-206ENST00000478214 P2RY13Q9BPV8 354 aa16.34■□□□□ 0.21
HMGA1-206ENST00000478214 BPIFA3Q9BQP9 254 aa16.34■□□□□ 0.21
HMGA1-206ENST00000478214 FUCA2Q9BTY2 467 aa16.34■□□□□ 0.21
HMGA1-206ENST00000478214 NAA15Q9BXJ9 866 aaKnown RBP16.34■□□□□ 0.21
HMGA1-206ENST00000478214 MIS12Q9H081 205 aa16.34■□□□□ 0.21
HMGA1-206ENST00000478214 IRF2BPLQ9H1B7 796 aa16.34■□□□□ 0.21
HMGA1-206ENST00000478214 PLCB1Q9NQ66 1216 aa16.34■□□□□ 0.21
HMGA1-206ENST00000478214 ST7Q9NRC1 585 aa16.34■□□□□ 0.21
HMGA1-206ENST00000478214 MARCH2Q9P0N8 246 aa16.34■□□□□ 0.21
HMGA1-206ENST00000478214 MIA3Q5JRA6 1907 aa16.33■□□□□ 0.21
HMGA1-206ENST00000478214 CACNA1IQ9P0X4 2223 aa16.33■□□□□ 0.2
HMGA1-206ENST00000478214 SYCE3A1L190 88 aa16.33■□□□□ 0.2
HMGA1-206ENST00000478214 LRRC10BA6NIK2 292 aa16.33■□□□□ 0.2
HMGA1-206ENST00000478214 LAMTOR5O43504 91 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms