RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 CYLC1P35663 651 aaPredicted RBP16.07■□□□□ 0.16
SEC13-215ENST00000477547 GABRB2P47870 512 aa16.07■□□□□ 0.16
SEC13-215ENST00000477547 PPP3CCP48454 512 aa16.07■□□□□ 0.16
SEC13-215ENST00000477547 YWHAGP61981 247 aaKnown RBP eCLIP16.07■□□□□ 0.16
SEC13-215ENST00000477547 PTP4A2Q12974 167 aa16.07■□□□□ 0.16
SEC13-215ENST00000477547 TEAD2Q15562 447 aa16.07■□□□□ 0.16
SEC13-215ENST00000477547 ARHGAP15Q53QZ3 475 aa16.07■□□□□ 0.16
SEC13-215ENST00000477547 FAM102AQ5T9C2 384 aaPredicted RBP16.07■□□□□ 0.16
SEC13-215ENST00000477547 PM20D1Q6GTS8 502 aa16.07■□□□□ 0.16
SEC13-215ENST00000477547 ALKBH5Q6P6C2 394 aaKnown RBP16.07■□□□□ 0.16
SEC13-215ENST00000477547 OLFML1Q6UWY5 402 aa16.07■□□□□ 0.16
SEC13-215ENST00000477547 XYLT1Q86Y38 959 aa16.07■□□□□ 0.16
SEC13-215ENST00000477547 DNAAF5Q86Y56 855 aa16.07■□□□□ 0.16
SEC13-215ENST00000477547 ZDHHC17Q8IUH5 632 aa16.07■□□□□ 0.16
SEC13-215ENST00000477547 SCUBE3Q8IX30 993 aa16.07■□□□□ 0.16
SEC13-215ENST00000477547 CCDC112Q8NEF3 446 aa16.07■□□□□ 0.16
SEC13-215ENST00000477547 ITFG1Q8TB96 612 aa16.07■□□□□ 0.16
SEC13-215ENST00000477547 GOLGA1Q92805 767 aa16.07■□□□□ 0.16
SEC13-215ENST00000477547 ZNF653Q96CK0 615 aa16.07■□□□□ 0.16
SEC13-215ENST00000477547 SLITRK6Q9H5Y7 841 aa16.07■□□□□ 0.16
SEC13-215ENST00000477547 NMUR1Q9HB89 426 aa16.07■□□□□ 0.16
SEC13-215ENST00000477547 TRPC7Q9HCX4 862 aa16.07■□□□□ 0.16
SEC13-215ENST00000477547 NENFQ9UMX5 172 aa16.07■□□□□ 0.16
SEC13-215ENST00000477547 ZNF840PA6NDX5 716 aa16.06■□□□□ 0.16
SEC13-215ENST00000477547 MOSPD3O75425 235 aa16.06■□□□□ 0.16
SEC13-215ENST00000477547 LTFP02788 710 aa16.06■□□□□ 0.16
SEC13-215ENST00000477547 FTLP02792 175 aaPredicted RBP16.06■□□□□ 0.16
SEC13-215ENST00000477547 ZDHHC11BP0C7U3 371 aa16.06■□□□□ 0.16
SEC13-215ENST00000477547 PSEN1P49768 467 aa16.06■□□□□ 0.16
SEC13-215ENST00000477547 CCDC173Q0VFZ6 552 aa16.06■□□□□ 0.16
SEC13-215ENST00000477547 CCDC122Q5T0U0 273 aa16.06■□□□□ 0.16
SEC13-215ENST00000477547 STXBP5Q5T5C0 1151 aa16.06■□□□□ 0.16
SEC13-215ENST00000477547 GPR158Q5T848 1215 aa16.06■□□□□ 0.16
SEC13-215ENST00000477547 SCD5Q86SK9 330 aa16.06■□□□□ 0.16
SEC13-215ENST00000477547 MON1AQ86VX9 555 aa16.06■□□□□ 0.16
SEC13-215ENST00000477547 RNF135Q8IUD6 432 aa16.06■□□□□ 0.16
SEC13-215ENST00000477547 NPAS3Q8IXF0 933 aa16.06■□□□□ 0.16
SEC13-215ENST00000477547 CCDC170Q8IYT3 715 aa16.06■□□□□ 0.16
SEC13-215ENST00000477547 MCOLN2Q8IZK6 566 aa16.06■□□□□ 0.16
SEC13-215ENST00000477547 TRIM11Q96F44 468 aa16.06■□□□□ 0.16
SEC13-215ENST00000477547 METTL5Q9NRN9 209 aaKnown RBP16.06■□□□□ 0.16
SEC13-215ENST00000477547 WDR35Q9P2L0 1181 aa16.06■□□□□ 0.16
SEC13-215ENST00000477547 CHORDC1Q9UHD1 332 aaPredicted RBP16.06■□□□□ 0.16
SEC13-215ENST00000477547 NRDCO43847 1150 aa16.05■□□□□ 0.16
SEC13-215ENST00000477547 TLR5O60602 858 aa16.05■□□□□ 0.16
SEC13-215ENST00000477547 HSF2BPO75031 334 aa16.05■□□□□ 0.16
SEC13-215ENST00000477547 IPO7O95373 1038 aaKnown RBP16.05■□□□□ 0.16
SEC13-215ENST00000477547 ABCB4P21439 1286 aa16.05■□□□□ 0.16
SEC13-215ENST00000477547 RRM1P23921 792 aa16.05■□□□□ 0.16
SEC13-215ENST00000477547 SCNN1AP37088 669 aa16.05■□□□□ 0.16
SEC13-215ENST00000477547 PGFP49763 221 aa16.05■□□□□ 0.16
SEC13-215ENST00000477547 GSCP56915 257 aaPredicted RBP16.05■□□□□ 0.16
SEC13-215ENST00000477547 SLC6A3Q01959 620 aa16.05■□□□□ 0.16
SEC13-215ENST00000477547 MTF1Q14872 753 aa16.05■□□□□ 0.16
SEC13-215ENST00000477547 BTBD8Q5XKL5 378 aa16.05■□□□□ 0.16
SEC13-215ENST00000477547 DNAJC24Q6P3W2 148 aa16.05■□□□□ 0.16
SEC13-215ENST00000477547 RAD9BQ6WBX8 426 aa16.05■□□□□ 0.16
SEC13-215ENST00000477547 SLC26A9Q7LBE3 791 aa16.05■□□□□ 0.16
SEC13-215ENST00000477547 PHLDB2Q86SQ0 1253 aa16.05■□□□□ 0.16
SEC13-215ENST00000477547 TRIM62Q9BVG3 475 aa16.05■□□□□ 0.16
SEC13-215ENST00000477547 ISCUQ9H1K1 167 aa16.05■□□□□ 0.16
SEC13-215ENST00000477547 FAM86C1Q9NVL1 165 aa16.05■□□□□ 0.16
SEC13-215ENST00000477547 OSER1Q9NX31 292 aa16.05■□□□□ 0.16
SEC13-215ENST00000477547 C2orf78A6NCI8 922 aa16.04■□□□□ 0.16
SEC13-215ENST00000477547 DAB1O75553 588 aa16.04■□□□□ 0.16
SEC13-215ENST00000477547 GRAP2O75791 330 aa16.04■□□□□ 0.16
SEC13-215ENST00000477547 NDUFA10O95299 355 aa16.04■□□□□ 0.16
SEC13-215ENST00000477547 OAS1P00973 400 aaKnown RBP16.04■□□□□ 0.16
SEC13-215ENST00000477547 CKMP06732 381 aa16.04■□□□□ 0.16
SEC13-215ENST00000477547 MYBL1P10243 752 aa16.04■□□□□ 0.16
SEC13-215ENST00000477547 RALAP11233 206 aa16.04■□□□□ 0.16
SEC13-215ENST00000477547 RARGP13631 454 aa16.04■□□□□ 0.16
SEC13-215ENST00000477547 SP100P23497 879 aaPredicted RBP16.04■□□□□ 0.16
SEC13-215ENST00000477547 DDX6P26196 483 aaKnown RBP eCLIP16.04■□□□□ 0.163e-6■□□□□ 8.8
SEC13-215ENST00000477547 GBP2P32456 591 aaPredicted RBP16.04■□□□□ 0.16
SEC13-215ENST00000477547 TUBP50607 506 aa16.04■□□□□ 0.16
SEC13-215ENST00000477547 PTPN5P54829 565 aa16.04■□□□□ 0.16
SEC13-215ENST00000477547 ZNF268Q14587 947 aaPredicted RBP16.04■□□□□ 0.16
SEC13-215ENST00000477547 SMAD2Q15796 467 aaKnown RBP16.04■□□□□ 0.16
SEC13-215ENST00000477547 EFHC1Q5JVL4 640 aa16.04■□□□□ 0.16
SEC13-215ENST00000477547 HECTD3Q5T447 861 aa16.04■□□□□ 0.16
SEC13-215ENST00000477547 SNX30Q5VWJ9 437 aa16.04■□□□□ 0.16
SEC13-215ENST00000477547 BSPRYQ5W0U4 402 aa16.04■□□□□ 0.16
SEC13-215ENST00000477547 TXNDC8Q6A555 127 aa16.04■□□□□ 0.16
SEC13-215ENST00000477547 RSRC2Q7L4I2 434 aaKnown RBP16.04■□□□□ 0.16
SEC13-215ENST00000477547 LRRC8AQ8IWT6 810 aa16.04■□□□□ 0.16
SEC13-215ENST00000477547 C3orf20Q8ND61 904 aa16.04■□□□□ 0.16
SEC13-215ENST00000477547 EDEM1Q92611 657 aa16.04■□□□□ 0.16
SEC13-215ENST00000477547 FGF13Q92913 245 aa16.04■□□□□ 0.16
SEC13-215ENST00000477547 MCRS1Q96EZ8 462 aa16.04■□□□□ 0.16
SEC13-215ENST00000477547 VCPIP1Q96JH7 1222 aa16.04■□□□□ 0.16
SEC13-215ENST00000477547 NACA2Q9H009 215 aa16.04■□□□□ 0.16
SEC13-215ENST00000477547 TASP1Q9H6P5 420 aa16.04■□□□□ 0.16
SEC13-215ENST00000477547 CCSER2Q9H7U1 834 aa16.04■□□□□ 0.16
SEC13-215ENST00000477547 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.04■□□□□ 0.16
SEC13-215ENST00000477547 ASNSD1Q9NWL6 643 aa16.04■□□□□ 0.16
SEC13-215ENST00000477547 CLIC5Q9NZA1 410 aa16.04■□□□□ 0.16
SEC13-215ENST00000477547 CNOT8Q9UFF9 292 aaKnown RBP16.04■□□□□ 0.16
SEC13-215ENST00000477547 CDH7Q9ULB5 785 aa16.04■□□□□ 0.16
SEC13-215ENST00000477547 TRAV19A0A0A6YYK7 116 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms