RNA–Protein interactions for RNA: ENST00000477335.5

PGK1-204, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 3

Gene PGK1, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-204ENST00000477335 MAGED2Q9UNF1 606 aaPredicted RBP9.73□□□□□ -0.85
PGK1-204ENST00000477335 MTCH2Q9Y6C9 303 aa9.73□□□□□ -0.85
PGK1-204ENST00000477335 MYO16Q9Y6X6 1858 aa9.72□□□□□ -0.85
PGK1-204ENST00000477335 TMEM265A0A087WTH1 108 aa9.72□□□□□ -0.85
PGK1-204ENST00000477335 ESPNB1AK53 854 aa9.72□□□□□ -0.85
PGK1-204ENST00000477335 MDM4O15151 490 aa9.72□□□□□ -0.85
PGK1-204ENST00000477335 CCP110O43303 1012 aa9.72□□□□□ -0.85
PGK1-204ENST00000477335 NCK2O43639 380 aa9.72□□□□□ -0.85
PGK1-204ENST00000477335 KRT86O43790 486 aa9.72□□□□□ -0.85
PGK1-204ENST00000477335 MOSPD3O75425 235 aa9.72□□□□□ -0.85
PGK1-204ENST00000477335 RTN3O95197 1032 aaPredicted RBP9.72□□□□□ -0.85
PGK1-204ENST00000477335 PAPLNO95428 1278 aa9.72□□□□□ -0.85
PGK1-204ENST00000477335 TBX18O95935 607 aa9.72□□□□□ -0.85
PGK1-204ENST00000477335 FTCDO95954 541 aa9.72□□□□□ -0.85
PGK1-204ENST00000477335 C1RP00736 705 aa9.72□□□□□ -0.85
PGK1-204ENST00000477335 F11P03951 625 aa9.72□□□□□ -0.85
PGK1-204ENST00000477335 NOP2P46087 812 aaKnown RBP9.72□□□□□ -0.85
PGK1-204ENST00000477335 EPHB3P54753 998 aa9.72□□□□□ -0.85
PGK1-204ENST00000477335 TAS2R40P59535 323 aa9.72□□□□□ -0.85
PGK1-204ENST00000477335 NTHL1P78549 312 aa9.72□□□□□ -0.85
PGK1-204ENST00000477335 MESDQ14696 234 aa9.72□□□□□ -0.85
PGK1-204ENST00000477335 ARHGAP29Q52LW3 1261 aa9.72□□□□□ -0.85
PGK1-204ENST00000477335 PPM1LQ5SGD2 360 aa9.72□□□□□ -0.85
PGK1-204ENST00000477335 BSPRYQ5W0U4 402 aa9.72□□□□□ -0.85
PGK1-204ENST00000477335 TXNRD3NBQ6F5E7 133 aa9.72□□□□□ -0.85
PGK1-204ENST00000477335 TMEM92Q6UXU6 159 aa9.72□□□□□ -0.85
PGK1-204ENST00000477335 CCDC149Q6ZUS6 474 aa9.72□□□□□ -0.85
PGK1-204ENST00000477335 CYP4V2Q6ZWL3 525 aaPredicted RBP9.72□□□□□ -0.85
PGK1-204ENST00000477335 GAREM2Q75VX8 874 aa9.72□□□□□ -0.85
PGK1-204ENST00000477335 Q7L0L9 218 aa9.72□□□□□ -0.85
PGK1-204ENST00000477335 SLFN11Q7Z7L1 901 aa9.72□□□□□ -0.85
PGK1-204ENST00000477335 FAM149B1Q96BN6 582 aa9.72□□□□□ -0.85
PGK1-204ENST00000477335 TRMT2BQ96GJ1 504 aaKnown RBP9.72□□□□□ -0.85
PGK1-204ENST00000477335 CEP295NLQ96MC4 621 aa9.72□□□□□ -0.85
PGK1-204ENST00000477335 PEBP4Q96S96 227 aa9.72□□□□□ -0.85
PGK1-204ENST00000477335 TBCBQ99426 244 aa9.72□□□□□ -0.85
PGK1-204ENST00000477335 DDX23Q9BUQ8 820 aaKnown RBP9.72□□□□□ -0.85
PGK1-204ENST00000477335 COMMD8Q9NX08 183 aa9.72□□□□□ -0.85
PGK1-204ENST00000477335 DNMT3BQ9UBC3 853 aaKnown RBP9.72□□□□□ -0.85
PGK1-204ENST00000477335 SCINQ9Y6U3 715 aa9.72□□□□□ -0.85
PGK1-204ENST00000477335 ZNF840PA6NDX5 716 aa9.71□□□□□ -0.86
PGK1-204ENST00000477335 I6L893 689 aaPredicted RBP9.71□□□□□ -0.86
PGK1-204ENST00000477335 HSF2BPO75031 334 aa9.71□□□□□ -0.86
PGK1-204ENST00000477335 PROSCO94903 275 aa9.71□□□□□ -0.86
PGK1-204ENST00000477335 IGLV3-25P01717 112 aa9.71□□□□□ -0.86
PGK1-204ENST00000477335 LRG1P02750 347 aa9.71□□□□□ -0.86
PGK1-204ENST00000477335 GLI1P08151 1106 aa9.71□□□□□ -0.86
PGK1-204ENST00000477335 CSH1P0DML2 217 aa9.71□□□□□ -0.86
PGK1-204ENST00000477335 CSH2P0DML3 217 aa9.71□□□□□ -0.86
PGK1-204ENST00000477335 PDGFRAP16234 1089 aa9.71□□□□□ -0.86
PGK1-204ENST00000477335 GJA1P17302 382 aa9.71□□□□□ -0.86
PGK1-204ENST00000477335 GPD1P21695 349 aa9.71□□□□□ -0.86
PGK1-204ENST00000477335 COMTP21964 271 aa9.71□□□□□ -0.86
PGK1-204ENST00000477335 PSMA2P25787 234 aa9.71□□□□□ -0.86
PGK1-204ENST00000477335 IL1R2P27930 398 aa9.71□□□□□ -0.86
PGK1-204ENST00000477335 HOXA9P31269 272 aa9.71□□□□□ -0.86
PGK1-204ENST00000477335 MATKP42679 507 aa9.71□□□□□ -0.86
PGK1-204ENST00000477335 MARCKSL1P49006 195 aa9.71□□□□□ -0.86
PGK1-204ENST00000477335 ZNF143P52747 638 aaPredicted RBP9.71□□□□□ -0.86
PGK1-204ENST00000477335 HDAC4P56524 1084 aa9.71□□□□□ -0.86
PGK1-204ENST00000477335 YWHAZP63104 245 aaKnown RBP9.71□□□□□ -0.86
PGK1-204ENST00000477335 CYP4F8P98187 520 aa9.71□□□□□ -0.86
PGK1-204ENST00000477335 DLX2Q07687 328 aaPredicted RBP9.71□□□□□ -0.86
PGK1-204ENST00000477335 EIF4EBP2Q13542 120 aaPredicted RBP9.71□□□□□ -0.86
PGK1-204ENST00000477335 SLC5A9Q2M3M2 681 aa9.71□□□□□ -0.86
PGK1-204ENST00000477335 DCAF6Q58WW2 860 aa9.71□□□□□ -0.86
PGK1-204ENST00000477335 EFHC1Q5JVL4 640 aa9.71□□□□□ -0.86
PGK1-204ENST00000477335 ZNF569Q5MCW4 686 aa9.71□□□□□ -0.86
PGK1-204ENST00000477335 STXBP5Q5T5C0 1151 aa9.71□□□□□ -0.86
PGK1-204ENST00000477335 C11orf63Q6NUN7 778 aa9.71□□□□□ -0.86
PGK1-204ENST00000477335 DCUN1D2Q6PH85 259 aa9.71□□□□□ -0.86
PGK1-204ENST00000477335 SYCE2Q6PIF2 218 aa9.71□□□□□ -0.86
PGK1-204ENST00000477335 ARCQ7LC44 396 aa9.71□□□□□ -0.86
PGK1-204ENST00000477335 TAC4Q86UU9 113 aa9.71□□□□□ -0.86
PGK1-204ENST00000477335 RNF10Q8N5U6 811 aaKnown RBP9.71□□□□□ -0.86
PGK1-204ENST00000477335 EFHBQ8N7U6 833 aa9.71□□□□□ -0.86
PGK1-204ENST00000477335 NIPA2Q8N8Q9 360 aa9.71□□□□□ -0.86
PGK1-204ENST00000477335 ADAM32Q8TC27 787 aa9.71□□□□□ -0.86
PGK1-204ENST00000477335 DQX1Q8TE96 717 aaKnown RBP9.71□□□□□ -0.86
PGK1-204ENST00000477335 HDAC7Q8WUI4 952 aa9.71□□□□□ -0.86
PGK1-204ENST00000477335 CENPIQ92674 756 aaPredicted RBP9.71□□□□□ -0.86
PGK1-204ENST00000477335 CASP10Q92851 521 aa9.71□□□□□ -0.86
PGK1-204ENST00000477335 CD101Q93033 1021 aa9.71□□□□□ -0.86
PGK1-204ENST00000477335 NT5C3BQ969T7 300 aa9.71□□□□□ -0.86
PGK1-204ENST00000477335 TCEAL4Q96EI5 215 aa9.71□□□□□ -0.86
PGK1-204ENST00000477335 C16orf45Q96MC5 204 aaPredicted RBP9.71□□□□□ -0.86
PGK1-204ENST00000477335 NPY6RQ99463 290 aa9.71□□□□□ -0.86
PGK1-204ENST00000477335 CDCA3Q99618 268 aaPredicted RBP9.71□□□□□ -0.86
PGK1-204ENST00000477335 CORO1BQ9BR76 489 aa9.71□□□□□ -0.86
PGK1-204ENST00000477335 APOL5Q9BWW9 433 aa9.71□□□□□ -0.86
PGK1-204ENST00000477335 FBXO44Q9H4M3 255 aa9.71□□□□□ -0.86
PGK1-204ENST00000477335 PLEKHA4Q9H4M7 779 aa9.71□□□□□ -0.86
PGK1-204ENST00000477335 CCSER2Q9H7U1 834 aa9.71□□□□□ -0.86
PGK1-204ENST00000477335 POPDC2Q9HBU9 364 aa9.71□□□□□ -0.86
PGK1-204ENST00000477335 MRPL47Q9HD33 250 aaKnown RBP9.71□□□□□ -0.86
PGK1-204ENST00000477335 ANLNQ9NQW6 1124 aa9.71□□□□□ -0.86
PGK1-204ENST00000477335 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.71□□□□□ -0.86
PGK1-204ENST00000477335 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.71□□□□□ -0.86
PGK1-204ENST00000477335 CLEC1BQ9P126 229 aa9.71□□□□□ -0.86
PGK1-204ENST00000477335 PACSIN2Q9UNF0 486 aaPredicted RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms