RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 SCFD1Q8WVM8 642 aa16.34■□□□□ 0.21
SMG5-204ENST00000476954 WBP1Q96G27 269 aa16.34■□□□□ 0.21
SMG5-204ENST00000476954 SYT15Q9BQS2 421 aa16.34■□□□□ 0.21
SMG5-204ENST00000476954 TMEM30AQ9NV96 361 aa16.34■□□□□ 0.21
SMG5-204ENST00000476954 KCNG1Q9UIX4 513 aa16.34■□□□□ 0.21
SMG5-204ENST00000476954 SNX9Q9Y5X1 595 aa16.34■□□□□ 0.21
SMG5-204ENST00000476954 STON1Q9Y6Q2 735 aa16.34■□□□□ 0.21
SMG5-204ENST00000476954 SPTAN1Q13813 2472 aaKnown RBP16.33■□□□□ 0.2
SMG5-204ENST00000476954 NEDD8-MDP1E9PL57 170 aa16.33■□□□□ 0.2
SMG5-204ENST00000476954 F8VP50 259 aa16.33■□□□□ 0.2
SMG5-204ENST00000476954 K7ENM7 598 aa16.33■□□□□ 0.2
SMG5-204ENST00000476954 ENC1O14682 589 aa16.33■□□□□ 0.2
SMG5-204ENST00000476954 GABRDO14764 452 aa16.33■□□□□ 0.2
SMG5-204ENST00000476954 TRAK2O60296 914 aa16.33■□□□□ 0.2
SMG5-204ENST00000476954 ANXA13P27216 316 aa16.33■□□□□ 0.2
SMG5-204ENST00000476954 AFF3P51826 1226 aaKnown RBP16.33■□□□□ 0.2
SMG5-204ENST00000476954 CACNA2D1P54289 1103 aa16.33■□□□□ 0.2
SMG5-204ENST00000476954 TFAMQ00059 246 aaKnown RBP16.33■□□□□ 0.2
SMG5-204ENST00000476954 CYP27A1Q02318 531 aa16.33■□□□□ 0.2
SMG5-204ENST00000476954 ORC2Q13416 577 aaPredicted RBP16.33■□□□□ 0.2
SMG5-204ENST00000476954 SOWAHAQ2M3V2 549 aa16.33■□□□□ 0.2
SMG5-204ENST00000476954 PRAMEF14Q5SWL7 426 aa16.33■□□□□ 0.2
SMG5-204ENST00000476954 ADALQ6DHV7 355 aa16.33■□□□□ 0.2
SMG5-204ENST00000476954 VSTM1Q6UX27 236 aa16.33■□□□□ 0.2
SMG5-204ENST00000476954 C4orf50Q6ZRC1 276 aa16.33■□□□□ 0.2
SMG5-204ENST00000476954 TMEM86AQ8N2M4 240 aa16.33■□□□□ 0.2
SMG5-204ENST00000476954 C1orf127Q8N9H9 656 aa16.33■□□□□ 0.2
SMG5-204ENST00000476954 SYT2Q8N9I0 419 aaPredicted RBP16.33■□□□□ 0.2
SMG5-204ENST00000476954 TTC9Q92623 222 aa16.33■□□□□ 0.2
SMG5-204ENST00000476954 OTUB2Q96DC9 234 aa16.33■□□□□ 0.2
SMG5-204ENST00000476954 C6orf106Q9H6K1 298 aaPredicted RBP16.33■□□□□ 0.2
SMG5-204ENST00000476954 SH3BP1Q9Y3L3 701 aa16.33■□□□□ 0.2
SMG5-204ENST00000476954 H0YCG3 227 aa16.32■□□□□ 0.2
SMG5-204ENST00000476954 RFPL3O75679 317 aa16.32■□□□□ 0.2
SMG5-204ENST00000476954 REC8O95072 547 aa16.32■□□□□ 0.2
SMG5-204ENST00000476954 PCSK1P29120 753 aa16.32■□□□□ 0.2
SMG5-204ENST00000476954 PNPLA4P41247 253 aa16.32■□□□□ 0.2
SMG5-204ENST00000476954 SLC12A3P55017 1021 aa16.32■□□□□ 0.2
SMG5-204ENST00000476954 CKAP5Q14008 2032 aa16.32■□□□□ 0.2
SMG5-204ENST00000476954 PKDCCQ504Y2 493 aa16.32■□□□□ 0.2
SMG5-204ENST00000476954 FBXL19Q6PCT2 694 aa16.32■□□□□ 0.2
SMG5-204ENST00000476954 PRICKLE2Q7Z3G6 844 aa16.32■□□□□ 0.2
SMG5-204ENST00000476954 ZSWIM2Q8NEG5 633 aa16.32■□□□□ 0.2
SMG5-204ENST00000476954 ENGASEQ8NFI3 743 aa16.32■□□□□ 0.2
SMG5-204ENST00000476954 CXorf38Q8TB03 319 aa16.32■□□□□ 0.2
SMG5-204ENST00000476954 KCNN1Q92952 543 aa16.32■□□□□ 0.2
SMG5-204ENST00000476954 IGSF8Q969P0 613 aa16.32■□□□□ 0.2
SMG5-204ENST00000476954 LGMNQ99538 433 aa16.32■□□□□ 0.2
SMG5-204ENST00000476954 CCSER2Q9H7U1 834 aa16.32■□□□□ 0.2
SMG5-204ENST00000476954 TM9SF3Q9HD45 589 aa16.32■□□□□ 0.2
SMG5-204ENST00000476954 LARSQ9P2J5 1176 aaKnown RBP16.32■□□□□ 0.2
SMG5-204ENST00000476954 AGO2Q9UKV8 859 aaKnown RBP16.32■□□□□ 0.2
SMG5-204ENST00000476954 PCDHGA1Q9Y5H4 931 aa16.32■□□□□ 0.2
SMG5-204ENST00000476954 PLXNA2O75051 1894 aa16.31■□□□□ 0.2
SMG5-204ENST00000476954 GFRA2O00451 464 aa16.31■□□□□ 0.2
SMG5-204ENST00000476954 CACNG3O60359 315 aa16.31■□□□□ 0.2
SMG5-204ENST00000476954 PDGFRBP09619 1106 aa16.31■□□□□ 0.2
SMG5-204ENST00000476954 CISD3P0C7P0 127 aa16.31■□□□□ 0.2
SMG5-204ENST00000476954 TYRP14679 529 aa16.31■□□□□ 0.2
SMG5-204ENST00000476954 ACTN2P35609 894 aa16.31■□□□□ 0.2
SMG5-204ENST00000476954 PPP3CCP48454 512 aa16.31■□□□□ 0.2
SMG5-204ENST00000476954 LHX1P48742 406 aa16.31■□□□□ 0.2
SMG5-204ENST00000476954 CSRP3P50461 194 aa16.31■□□□□ 0.2
SMG5-204ENST00000476954 NOP14P78316 857 aaKnown RBP16.31■□□□□ 0.2
SMG5-204ENST00000476954 ME3Q16798 604 aa16.31■□□□□ 0.2
SMG5-204ENST00000476954 TBC1D25Q3MII6 688 aa16.31■□□□□ 0.2
SMG5-204ENST00000476954 TPGS1Q6ZTW0 290 aa16.31■□□□□ 0.2
SMG5-204ENST00000476954 TMPRSS6Q8IU80 811 aa16.31■□□□□ 0.2
SMG5-204ENST00000476954 KBTBD7Q8WVZ9 684 aa16.31■□□□□ 0.2
SMG5-204ENST00000476954 GTF3C6Q969F1 213 aa16.31■□□□□ 0.2
SMG5-204ENST00000476954 SIPA1Q96FS4 1042 aa16.31■□□□□ 0.2
SMG5-204ENST00000476954 P2RY11Q96G91 374 aa16.31■□□□□ 0.2
SMG5-204ENST00000476954 CNDP2Q96KP4 475 aaKnown RBP16.31■□□□□ 0.2
SMG5-204ENST00000476954 REEP2Q9BRK0 252 aa16.31■□□□□ 0.2
SMG5-204ENST00000476954 BBS2Q9BXC9 721 aa16.31■□□□□ 0.2
SMG5-204ENST00000476954 GDAP2Q9NXN4 497 aa16.31■□□□□ 0.2
SMG5-204ENST00000476954 LRRK2Q5S007 2527 aa16.31■□□□□ 0.2
SMG5-204ENST00000476954 ARID1BQ8NFD5 2236 aaPredicted RBP16.3■□□□□ 0.2
SMG5-204ENST00000476954 PLA2G4BP0C869 781 aa16.3■□□□□ 0.2
SMG5-204ENST00000476954 OXTRP30559 389 aa16.3■□□□□ 0.2
SMG5-204ENST00000476954 CTSKP43235 329 aa16.3■□□□□ 0.2
SMG5-204ENST00000476954 ACADVLP49748 655 aa16.3■□□□□ 0.2
SMG5-204ENST00000476954 STARD3Q14849 445 aa16.3■□□□□ 0.2
SMG5-204ENST00000476954 TDRD10Q5VZ19 366 aaKnown RBP16.3■□□□□ 0.2
SMG5-204ENST00000476954 MYCT1Q8N699 235 aa16.3■□□□□ 0.2
SMG5-204ENST00000476954 TOP6BLQ8N6T0 577 aa16.3■□□□□ 0.2
SMG5-204ENST00000476954 BHMTQ93088 406 aa16.3■□□□□ 0.2
SMG5-204ENST00000476954 PCED1BQ96HM7 432 aa16.3■□□□□ 0.2
SMG5-204ENST00000476954 NUP58Q9BVL2 599 aa16.3■□□□□ 0.2
SMG5-204ENST00000476954 CHORDC1Q9UHD1 332 aaPredicted RBP16.3■□□□□ 0.2
SMG5-204ENST00000476954 IL17BQ9UHF5 180 aa16.3■□□□□ 0.2
SMG5-204ENST00000476954 NME7Q9Y5B8 376 aa16.3■□□□□ 0.2
SMG5-204ENST00000476954 AHCTF1Q8WYP5 2266 aa16.3■□□□□ 0.2
SMG5-204ENST00000476954 LDOC1O95751 146 aaPredicted RBP16.29■□□□□ 0.2
SMG5-204ENST00000476954 IGLV3-19P01714 112 aa16.29■□□□□ 0.2
SMG5-204ENST00000476954 ACSL1P33121 698 aa16.29■□□□□ 0.2
SMG5-204ENST00000476954 DGKGP49619 791 aa16.29■□□□□ 0.2
SMG5-204ENST00000476954 COPAP53621 1224 aa16.29■□□□□ 0.2
SMG5-204ENST00000476954 TMPRSS3P57727 454 aa16.29■□□□□ 0.2
SMG5-204ENST00000476954 TEAD4Q15561 434 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms