RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 GRAMD4Q6IC98 578 aa12.07□□□□□ -0.48
BRCA1-213ENST00000476777 SDE2Q6IQ49 451 aa12.07□□□□□ -0.48
BRCA1-213ENST00000476777 MARCH9Q86YJ5 346 aa12.07□□□□□ -0.48
BRCA1-213ENST00000476777 SYCP3Q8IZU3 236 aa12.07□□□□□ -0.48
BRCA1-213ENST00000476777 NUP93Q8N1F7 819 aa12.07□□□□□ -0.48
BRCA1-213ENST00000476777 SPRYD3Q8NCJ5 442 aa12.07□□□□□ -0.48
BRCA1-213ENST00000476777 PDZD8Q8NEN9 1154 aa12.07□□□□□ -0.48
BRCA1-213ENST00000476777 SCAMP5Q8TAC9 235 aa12.07□□□□□ -0.48
BRCA1-213ENST00000476777 SETD7Q8WTS6 366 aaKnown RBP12.07□□□□□ -0.48
BRCA1-213ENST00000476777 NOC3LQ8WTT2 800 aaKnown RBP12.07□□□□□ -0.48
BRCA1-213ENST00000476777 DNAJC19Q96DA6 116 aa12.07□□□□□ -0.48
BRCA1-213ENST00000476777 FGFBP2Q9BYJ0 223 aa12.07□□□□□ -0.48
BRCA1-213ENST00000476777 ELOVL4Q9GZR5 314 aa12.07□□□□□ -0.48
BRCA1-213ENST00000476777 DPEP3Q9H4B8 488 aa12.07□□□□□ -0.48
BRCA1-213ENST00000476777 CCSER2Q9H7U1 834 aa12.07□□□□□ -0.48
BRCA1-213ENST00000476777 IL21RQ9HBE5 538 aa12.07□□□□□ -0.48
BRCA1-213ENST00000476777 DNAJC17Q9NVM6 304 aaKnown RBP12.07□□□□□ -0.48
BRCA1-213ENST00000476777 CHORDC1Q9UHD1 332 aaPredicted RBP12.07□□□□□ -0.48
BRCA1-213ENST00000476777 NFE2L3Q9Y4A8 694 aa12.07□□□□□ -0.48
BRCA1-213ENST00000476777 PCDHB13Q9Y5F0 798 aa12.07□□□□□ -0.48
BRCA1-213ENST00000476777 RAD54BQ9Y620 910 aa12.07□□□□□ -0.48
BRCA1-213ENST00000476777 COL6A6A6NMZ7 2263 aa12.06□□□□□ -0.48
BRCA1-213ENST00000476777 A0A087WV48 116 aa12.06□□□□□ -0.48
BRCA1-213ENST00000476777 TRABD2BA6NFA1 517 aa12.06□□□□□ -0.48
BRCA1-213ENST00000476777 CLDN5O00501 218 aa12.06□□□□□ -0.48
BRCA1-213ENST00000476777 CACNG3O60359 315 aa12.06□□□□□ -0.48
BRCA1-213ENST00000476777 GREM1O60565 184 aa12.06□□□□□ -0.48
BRCA1-213ENST00000476777 TACC1O75410 805 aa12.06□□□□□ -0.48
BRCA1-213ENST00000476777 RTN3O95197 1032 aaPredicted RBP12.06□□□□□ -0.48
BRCA1-213ENST00000476777 TNNC2P02585 160 aa12.06□□□□□ -0.48
BRCA1-213ENST00000476777 ATXN1LP0C7T5 689 aaKnown RBP12.06□□□□□ -0.48
BRCA1-213ENST00000476777 ZDHHC11BP0C7U3 371 aa12.06□□□□□ -0.48
BRCA1-213ENST00000476777 ZNF883P0CG24 379 aa12.06□□□□□ -0.48
BRCA1-213ENST00000476777 CD6P30203 668 aa12.06□□□□□ -0.48
BRCA1-213ENST00000476777 BNC1Q01954 994 aa12.06□□□□□ -0.48
BRCA1-213ENST00000476777 CYP4F3Q08477 520 aa12.06□□□□□ -0.48
BRCA1-213ENST00000476777 DUOXA2Q1HG44 320 aa12.06□□□□□ -0.48
BRCA1-213ENST00000476777 KIAA1324Q6UXG2 1013 aaKnown RBP12.06□□□□□ -0.48
BRCA1-213ENST00000476777 DBX2Q6ZNG2 339 aa12.06□□□□□ -0.48
BRCA1-213ENST00000476777 USP49Q70CQ1 688 aa12.06□□□□□ -0.48
BRCA1-213ENST00000476777 GPD1LQ8N335 351 aa12.06□□□□□ -0.48
BRCA1-213ENST00000476777 ZCCHC9Q8N567 271 aaKnown RBP12.06□□□□□ -0.48
BRCA1-213ENST00000476777 OR6B3Q8NGW1 331 aa12.06□□□□□ -0.48
BRCA1-213ENST00000476777 TOE1Q96GM8 510 aaKnown RBP12.06□□□□□ -0.48
BRCA1-213ENST00000476777 CRELD1Q96HD1 420 aa12.06□□□□□ -0.48
BRCA1-213ENST00000476777 EPSTI1Q96J88 318 aa12.06□□□□□ -0.48
BRCA1-213ENST00000476777 KCNK16Q96T55 309 aa12.06□□□□□ -0.48
BRCA1-213ENST00000476777 KIF2CQ99661 725 aa12.06□□□□□ -0.48
BRCA1-213ENST00000476777 B3GNT5Q9BYG0 378 aa12.06□□□□□ -0.48
BRCA1-213ENST00000476777 SNX25Q9H3E2 840 aa12.06□□□□□ -0.48
BRCA1-213ENST00000476777 GAREM1Q9H706 876 aa12.06□□□□□ -0.48
BRCA1-213ENST00000476777 OLFML3Q9NRN5 406 aa12.06□□□□□ -0.48
BRCA1-213ENST00000476777 WSB2Q9NYS7 404 aaPredicted RBP12.06□□□□□ -0.48
BRCA1-213ENST00000476777 IL37Q9NZH6 218 aa12.06□□□□□ -0.48
BRCA1-213ENST00000476777 FNDC3AQ9Y2H6 1198 aaKnown RBP12.06□□□□□ -0.48
BRCA1-213ENST00000476777 KIF3AQ9Y496 699 aa12.06□□□□□ -0.48
BRCA1-213ENST00000476777 MEI4A8MW99 385 aa12.05□□□□□ -0.48
BRCA1-213ENST00000476777 WASH3PC4AMC7 463 aa12.05□□□□□ -0.48
BRCA1-213ENST00000476777 NEDD8-MDP1E9PL57 170 aa12.05□□□□□ -0.48
BRCA1-213ENST00000476777 GFRA2O00451 464 aa12.05□□□□□ -0.48
BRCA1-213ENST00000476777 EIF5BO60841 1220 aaKnown RBP12.05□□□□□ -0.48
BRCA1-213ENST00000476777 CILPO75339 1184 aa12.05□□□□□ -0.48
BRCA1-213ENST00000476777 BMP15O95972 392 aa12.05□□□□□ -0.48
BRCA1-213ENST00000476777 FAM163BP0C2L3 166 aa12.05□□□□□ -0.48
BRCA1-213ENST00000476777 IRF1P10914 325 aa12.05□□□□□ -0.48
BRCA1-213ENST00000476777 NCAM1P13591 858 aa12.05□□□□□ -0.48
BRCA1-213ENST00000476777 TYRP14679 529 aa12.05□□□□□ -0.48
BRCA1-213ENST00000476777 CAMK2BQ13554 666 aa12.05□□□□□ -0.48
BRCA1-213ENST00000476777 METTL3Q86U44 580 aaKnown RBP12.05□□□□□ -0.48
BRCA1-213ENST00000476777 CBWD2Q8IUF1 395 aa12.05□□□□□ -0.48
BRCA1-213ENST00000476777 SCUBE3Q8IX30 993 aa12.05□□□□□ -0.48
BRCA1-213ENST00000476777 SCFD1Q8WVM8 642 aa12.05□□□□□ -0.48
BRCA1-213ENST00000476777 XPO6Q96QU8 1125 aaKnown RBP12.05□□□□□ -0.48
BRCA1-213ENST00000476777 TRIM9Q9C026 710 aa12.05□□□□□ -0.48
BRCA1-213ENST00000476777 PRDM16Q9HAZ2 1276 aa12.05□□□□□ -0.48
BRCA1-213ENST00000476777 TM7SF3Q9NS93 570 aa12.05□□□□□ -0.48
BRCA1-213ENST00000476777 MARK1Q9P0L2 795 aa12.05□□□□□ -0.48
BRCA1-213ENST00000476777 GMIPQ9P107 970 aa12.05□□□□□ -0.48
BRCA1-213ENST00000476777 USP36Q9P275 1121 aaKnown RBP12.05□□□□□ -0.48
BRCA1-213ENST00000476777 STK17AQ9UEE5 414 aa12.05□□□□□ -0.48
BRCA1-213ENST00000476777 FAM92AA1XBS5 289 aa12.04□□□□□ -0.48
BRCA1-213ENST00000476777 FRMD3A2A2Y4 597 aa12.04□□□□□ -0.48
BRCA1-213ENST00000476777 ZNF233A6NK53 670 aa12.04□□□□□ -0.48
BRCA1-213ENST00000476777 H3BQV1 296 aa12.04□□□□□ -0.48
BRCA1-213ENST00000476777 KIAA0391O15091 583 aaKnown RBP12.04□□□□□ -0.48
BRCA1-213ENST00000476777 BCAT2O15382 392 aaPredicted RBP12.04□□□□□ -0.48
BRCA1-213ENST00000476777 PRPF6O94906 941 aaKnown RBP12.04□□□□□ -0.48
BRCA1-213ENST00000476777 CER1O95813 267 aa12.04□□□□□ -0.48
BRCA1-213ENST00000476777 CST3P01034 146 aaPredicted RBP12.04□□□□□ -0.48
BRCA1-213ENST00000476777 PRB1P04280 392 aa12.04□□□□□ -0.48
BRCA1-213ENST00000476777 CISD3P0C7P0 127 aa12.04□□□□□ -0.48
BRCA1-213ENST00000476777 MATKP42679 507 aa12.04□□□□□ -0.48
BRCA1-213ENST00000476777 PGFP49763 221 aa12.04□□□□□ -0.48
BRCA1-213ENST00000476777 SLC5A3P53794 718 aa12.04□□□□□ -0.48
BRCA1-213ENST00000476777 ALCAMQ13740 583 aa12.04□□□□□ -0.48
BRCA1-213ENST00000476777 SURF1Q15526 300 aa12.04□□□□□ -0.48
BRCA1-213ENST00000476777 HLA-BQ31612 363 aa12.04□□□□□ -0.48
BRCA1-213ENST00000476777 IL27RAQ6UWB1 636 aa12.04□□□□□ -0.48
BRCA1-213ENST00000476777 HTR3DQ70Z44 454 aa12.04□□□□□ -0.48
BRCA1-213ENST00000476777 TRAPPC11Q7Z392 1133 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms