RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 NCDNQ9UBB6 729 aa10.74□□□□□ -0.69
CCM2-208ENST00000476594 GMEB2Q9UKD1 530 aa10.74□□□□□ -0.69
CCM2-208ENST00000476594 USP3Q9Y6I4 520 aa10.74□□□□□ -0.69
CCM2-208ENST00000476594 MYO16Q9Y6X6 1858 aa10.74□□□□□ -0.69
CCM2-208ENST00000476594 COL4A3Q01955 1670 aa10.73□□□□□ -0.69
CCM2-208ENST00000476594 CCDC163A0A0D9SF12 145 aa10.73□□□□□ -0.69
CCM2-208ENST00000476594 GTPBP10A4D1E9 387 aaKnown RBP10.73□□□□□ -0.69
CCM2-208ENST00000476594 M0QYV0 167 aa10.73□□□□□ -0.69
CCM2-208ENST00000476594 SART1O43290 800 aaKnown RBP10.73□□□□□ -0.69
CCM2-208ENST00000476594 RNF40O75150 1001 aa10.73□□□□□ -0.69
CCM2-208ENST00000476594 ZBED1O96006 694 aa10.73□□□□□ -0.69
CCM2-208ENST00000476594 CYP17A1P05093 508 aa10.73□□□□□ -0.69
CCM2-208ENST00000476594 KRT5P13647 590 aa10.73□□□□□ -0.69
CCM2-208ENST00000476594 HOXA6P31267 233 aa10.73□□□□□ -0.69
CCM2-208ENST00000476594 YWHAGP61981 247 aaKnown RBP eCLIP10.73□□□□□ -0.69
CCM2-208ENST00000476594 SATB1Q01826 763 aa10.73□□□□□ -0.69
CCM2-208ENST00000476594 PDE4CQ08493 712 aa10.73□□□□□ -0.69
CCM2-208ENST00000476594 MEA1Q16626 185 aa10.73□□□□□ -0.69
CCM2-208ENST00000476594 EXOC3L4Q17RC7 722 aa10.73□□□□□ -0.69
CCM2-208ENST00000476594 RAB41Q5JT25 222 aa10.73□□□□□ -0.69
CCM2-208ENST00000476594 TSSK4Q6SA08 328 aa10.73□□□□□ -0.69
CCM2-208ENST00000476594 LCLAT1Q6UWP7 414 aa10.73□□□□□ -0.69
CCM2-208ENST00000476594 Q6ZS52 159 aa10.73□□□□□ -0.69
CCM2-208ENST00000476594 HTR3DQ70Z44 454 aa10.73□□□□□ -0.69
CCM2-208ENST00000476594 ASCL5Q7RTU5 278 aa10.73□□□□□ -0.69
CCM2-208ENST00000476594 GPRIN1Q7Z2K8 1008 aa10.73□□□□□ -0.69
CCM2-208ENST00000476594 TRMT11Q7Z4G4 463 aaKnown RBP10.73□□□□□ -0.69
CCM2-208ENST00000476594 RBBP8NLQ8NC74 664 aaPredicted RBP10.73□□□□□ -0.69
CCM2-208ENST00000476594 NELL1Q92832 810 aa10.73□□□□□ -0.69
CCM2-208ENST00000476594 TRIM62Q9BVG3 475 aa10.73□□□□□ -0.69
CCM2-208ENST00000476594 EPC1Q9H2F5 836 aa10.73□□□□□ -0.69
CCM2-208ENST00000476594 LINC00597Q9H2U6 94 aa10.73□□□□□ -0.69
CCM2-208ENST00000476594 CNGB3Q9NQW8 809 aa10.73□□□□□ -0.69
CCM2-208ENST00000476594 SPHK2Q9NRA0 654 aa10.73□□□□□ -0.69
CCM2-208ENST00000476594 WDR35Q9P2L0 1181 aa10.73□□□□□ -0.69
CCM2-208ENST00000476594 RASAL2Q9UJF2 1139 aa10.73□□□□□ -0.69
CCM2-208ENST00000476594 PTPRZ1P23471 2315 aaPredicted RBP10.73□□□□□ -0.69
CCM2-208ENST00000476594 RIF1Q5UIP0 2472 aaKnown RBP10.73□□□□□ -0.69
CCM2-208ENST00000476594 FAM186AA6NE01 2351 aa10.72□□□□□ -0.69
CCM2-208ENST00000476594 OTOL1A6NHN0 477 aaPredicted RBP10.72□□□□□ -0.69
CCM2-208ENST00000476594 O00370 1275 aa10.72□□□□□ -0.69
CCM2-208ENST00000476594 ZBTB24O43167 697 aaPredicted RBP10.72□□□□□ -0.69
CCM2-208ENST00000476594 HOXC11O43248 304 aaPredicted RBP10.72□□□□□ -0.69
CCM2-208ENST00000476594 LILRB5O75023 590 aa10.72□□□□□ -0.69
CCM2-208ENST00000476594 ALDH1A2O94788 518 aa10.72□□□□□ -0.69
CCM2-208ENST00000476594 FBXO21O94952 628 aa10.72□□□□□ -0.69
CCM2-208ENST00000476594 MBD3O95983 291 aa10.72□□□□□ -0.69
CCM2-208ENST00000476594 EGFP01133 1207 aa10.72□□□□□ -0.69
CCM2-208ENST00000476594 CYBBP04839 570 aa10.72□□□□□ -0.69
CCM2-208ENST00000476594 CHKAP35790 457 aa10.72□□□□□ -0.69
CCM2-208ENST00000476594 GRIA2P42262 883 aa10.72□□□□□ -0.69
CCM2-208ENST00000476594 ZNF445P59923 1031 aa10.72□□□□□ -0.69
CCM2-208ENST00000476594 MRPS21P82921 87 aaKnown RBP10.72□□□□□ -0.69
CCM2-208ENST00000476594 ZXDBP98169 803 aa10.72□□□□□ -0.69
CCM2-208ENST00000476594 ADIGQ0VDE8 80 aa10.72□□□□□ -0.69
CCM2-208ENST00000476594 CNGA2Q16280 664 aa10.72□□□□□ -0.69
CCM2-208ENST00000476594 MAN2A1Q16706 1144 aa10.72□□□□□ -0.69
CCM2-208ENST00000476594 ANO4Q32M45 955 aa10.72□□□□□ -0.69
CCM2-208ENST00000476594 LY6G5CQ5SRR4 150 aa10.72□□□□□ -0.69
CCM2-208ENST00000476594 CEP68Q76N32 757 aa10.72□□□□□ -0.69
CCM2-208ENST00000476594 RRAGAQ7L523 313 aa10.72□□□□□ -0.69
CCM2-208ENST00000476594 SYT13Q7L8C5 426 aa10.72□□□□□ -0.69
CCM2-208ENST00000476594 TTC30AQ86WT1 665 aa10.72□□□□□ -0.69
CCM2-208ENST00000476594 MIB1Q86YT6 1006 aa10.72□□□□□ -0.69
CCM2-208ENST00000476594 SCML4Q8N228 414 aa10.72□□□□□ -0.69
CCM2-208ENST00000476594 UBR7Q8N806 425 aa10.72□□□□□ -0.69
CCM2-208ENST00000476594 ANKRD20A12PQ8NF67 263 aa10.72□□□□□ -0.69
CCM2-208ENST00000476594 RPLP0P6Q8NHW5 317 aa10.72□□□□□ -0.69
CCM2-208ENST00000476594 KCTD13Q8WZ19 329 aa10.72□□□□□ -0.69
CCM2-208ENST00000476594 CHFRQ96EP1 664 aa10.72□□□□□ -0.69
CCM2-208ENST00000476594 ZFRQ96KR1 1074 aaKnown RBP10.72□□□□□ -0.69
CCM2-208ENST00000476594 HSFY1Q96LI6 401 aa10.72□□□□□ -0.69
CCM2-208ENST00000476594 KLF16Q9BXK1 252 aaPredicted RBP10.72□□□□□ -0.69
CCM2-208ENST00000476594 UBE2TQ9NPD8 197 aaPredicted RBP10.72□□□□□ -0.69
CCM2-208ENST00000476594 ARHGEF4Q9NR80 690 aa10.72□□□□□ -0.69
CCM2-208ENST00000476594 ABCC13Q9NSE7 274 aa10.72□□□□□ -0.69
CCM2-208ENST00000476594 DEC1Q9P2X7 70 aa10.72□□□□□ -0.69
CCM2-208ENST00000476594 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.72□□□□□ -0.69
CCM2-208ENST00000476594 SMG5Q9UPR3 1016 aaKnown RBP10.72□□□□□ -0.69
CCM2-208ENST00000476594 PES1O00541 588 aaKnown RBP10.71□□□□□ -0.69
CCM2-208ENST00000476594 FOXD2O60548 495 aaPredicted RBP10.71□□□□□ -0.69
CCM2-208ENST00000476594 KAT7O95251 611 aa10.71□□□□□ -0.69
CCM2-208ENST00000476594 OPRD1P41143 372 aa10.71□□□□□ -0.69
CCM2-208ENST00000476594 TNFRSF4P43489 277 aa10.71□□□□□ -0.69
CCM2-208ENST00000476594 ACADSBP45954 432 aa10.71□□□□□ -0.69
CCM2-208ENST00000476594 HARS2P49590 506 aaKnown RBP10.71□□□□□ -0.69
CCM2-208ENST00000476594 SNX16P57768 344 aa10.71□□□□□ -0.69
CCM2-208ENST00000476594 EFEMP1Q12805 493 aa10.71□□□□□ -0.69
CCM2-208ENST00000476594 SIM2Q14190 667 aaPredicted RBP10.71□□□□□ -0.69
CCM2-208ENST00000476594 GAS6Q14393 721 aa10.71□□□□□ -0.69
CCM2-208ENST00000476594 PM20D1Q6GTS8 502 aa10.71□□□□□ -0.69
CCM2-208ENST00000476594 GRAMD4Q6IC98 578 aa10.71□□□□□ -0.69
CCM2-208ENST00000476594 TRIM65Q6PJ69 517 aa10.71□□□□□ -0.69
CCM2-208ENST00000476594 RHBDF2Q6PJF5 856 aa10.71□□□□□ -0.69
CCM2-208ENST00000476594 SASS6Q6UVJ0 657 aa10.71□□□□□ -0.69
CCM2-208ENST00000476594 PRR23BQ6ZRT6 265 aa10.71□□□□□ -0.69
CCM2-208ENST00000476594 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.71□□□□□ -0.69
CCM2-208ENST00000476594 C11orf74Q86VG3 221 aa10.71□□□□□ -0.69
CCM2-208ENST00000476594 WDR5BQ86VZ2 330 aa10.71□□□□□ -0.69
CCM2-208ENST00000476594 BBS7Q8IWZ6 715 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms