RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 DOCK6Q96HP0 2047 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 CLUHO75153 1309 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 ARHGEF35A5YM69 484 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 OR14I1A6ND48 311 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 HIDE1A8MVS5 230 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 INO80B-WBP1J3KQ70 363 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 ADAMTS3O15072 1205 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 CBFA2T2O43439 604 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 SLC26A4O43511 780 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 EDIL3O43854 480 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 TSPAN1O60635 241 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 USO1O60763 962 aaKnown RBP4.58□□□□□ -1.68
VPS13D-206ENST00000476045 CLASP2O75122 1294 aaKnown RBP4.58□□□□□ -1.68
VPS13D-206ENST00000476045 SERPINC1P01008 464 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 GALTP07902 379 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 ATP1A3P13637 1013 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 RPL10P27635 214 aaKnown RBP4.58□□□□□ -1.68
VPS13D-206ENST00000476045 RPA1P27694 616 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 HOXA9P31269 272 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 ABCD1P33897 745 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 CA8P35219 290 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 PBX3P40426 434 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 NAMPTP43490 491 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 GIPRP48546 466 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 SLC11A1P49279 550 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 CLCN4P51793 760 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 NPEPPSP55786 919 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 LINC00310P59036 64 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 DLG4P78352 724 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 NHLH1Q02575 133 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 CYP4A11Q02928 519 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 GRIN1Q05586 938 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 MBTD1Q05BQ5 628 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 TUSC3Q13454 348 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 CAPSQ13938 189 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 MAPK6Q16659 721 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 LONRF3Q496Y0 759 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 HSP90AA4PQ58FG1 418 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 ATAT1Q5SQI0 421 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 RESP18Q5W5W9 173 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 CRTC3Q6UUV7 619 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 ZPBP2Q6X784 338 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 UNC5AQ6ZN44 842 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 ATG14Q6ZNE5 492 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 KRBA2Q6ZNG9 492 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 LRRC55Q6ZSA7 311 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 RTL10Q7L3V2 364 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 TRMT1LQ7Z2T5 733 aaKnown RBP4.58□□□□□ -1.68
VPS13D-206ENST00000476045 RBM23Q86U06 439 aaKnown RBP4.58□□□□□ -1.68
VPS13D-206ENST00000476045 GRAMD1CQ8IYS0 662 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 RNF168Q8IYW5 571 aaPredicted RBP4.58□□□□□ -1.68
VPS13D-206ENST00000476045 CCDC150Q8NCX0 1101 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 TMEM52Q8NDY8 209 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 OR6P1Q8NGX9 317 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 KIF18AQ8NI77 898 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 ZSCAN18Q8TBC5 510 aaPredicted RBP4.58□□□□□ -1.68
VPS13D-206ENST00000476045 PRPF31Q8WWY3 499 aaKnown RBP4.58□□□□□ -1.68
VPS13D-206ENST00000476045 KIFAP3Q92845 792 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 TMEM143Q96AN5 459 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 DYDC2Q96IM9 177 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 RPGRIP1Q96KN7 1286 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 PPP1R13BQ96KQ4 1090 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 HSD17B14Q9BPX1 270 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 EIF2AK1Q9BQI3 630 aaKnown RBP4.58□□□□□ -1.68
VPS13D-206ENST00000476045 BPIFA3Q9BQP9 254 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 PLCD4Q9BRC7 762 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 POLR3CQ9BUI4 534 aaPredicted RBP4.58□□□□□ -1.68
VPS13D-206ENST00000476045 SLC12A9Q9BXP2 914 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 POLR3FQ9H1D9 316 aaPredicted RBP4.58□□□□□ -1.68
VPS13D-206ENST00000476045 S1PR5Q9H228 398 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 PLEKHA4Q9H4M7 779 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 NRDE2Q9H7Z3 1164 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 KCNK12Q9HB15 430 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 XPNPEP1Q9NQW7 623 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 FNIP2Q9P278 1114 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 IGSF9Q9P2J2 1179 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 CGNQ9P2M7 1197 aaKnown RBP4.58□□□□□ -1.68
VPS13D-206ENST00000476045 IMPACTQ9P2X3 320 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 KCNG1Q9UIX4 513 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 PPT2Q9UMR5 302 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 SMG5Q9UPR3 1016 aaKnown RBP4.58□□□□□ -1.68
VPS13D-206ENST00000476045 HPSEQ9Y251 543 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 FAN1Q9Y2M0 1017 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 GPR55Q9Y2T6 319 aaPredicted RBP4.58□□□□□ -1.68
VPS13D-206ENST00000476045 IPPQ9Y573 584 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 CACNA1IQ9P0X4 2223 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 ANK1P16157 1881 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 EPG5Q9HCE0 2579 aa4.58□□□□□ -1.68
VPS13D-206ENST00000476045 NCOR2Q9Y618 2525 aa4.57□□□□□ -1.68
VPS13D-206ENST00000476045 CNOT1A5YKK6 2376 aaKnown RBP4.57□□□□□ -1.68
VPS13D-206ENST00000476045 SPTBN2O15020 2390 aa4.57□□□□□ -1.68
VPS13D-206ENST00000476045 GPR179Q6PRD1 2367 aa4.57□□□□□ -1.68
VPS13D-206ENST00000476045 A0A1B0GUA9 196 aa4.57□□□□□ -1.68
VPS13D-206ENST00000476045 TMEM150BA6NC51 233 aa4.57□□□□□ -1.68
VPS13D-206ENST00000476045 ARL5CA6NH57 179 aa4.57□□□□□ -1.68
VPS13D-206ENST00000476045 LRRIQ4A6NIV6 560 aa4.57□□□□□ -1.68
VPS13D-206ENST00000476045 BTBD18B2RXH4 712 aa4.57□□□□□ -1.68
VPS13D-206ENST00000476045 C2CD4DB7Z1M9 353 aa4.57□□□□□ -1.68
VPS13D-206ENST00000476045 H0YCG3 227 aa4.57□□□□□ -1.68
VPS13D-206ENST00000476045 TMEM189-UBE2V1I3L0A0 370 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms