RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 GPATCH11Q8N954 259 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 DNERQ8NFT8 737 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 ZNF606Q8WXB4 792 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 CPA5Q8WXQ8 436 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 CPT1BQ92523 772 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 APBB2Q92870 758 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 ATP6V0A1Q93050 837 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 CCDC127Q96BQ5 260 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 LRRC37BQ96QE4 947 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 MIPEPQ99797 713 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 KATNBL1Q9H079 304 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 FAM124BQ9H5Z6 455 aaPredicted RBP7.17□□□□□ -1.26
UBR4-212ENST00000475973 DENND2DQ9H6A0 471 aaPredicted RBP7.17□□□□□ -1.26
UBR4-212ENST00000475973 DCLRE1BQ9H816 532 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 PLAC1Q9HBJ0 212 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 ETNK1Q9HBU6 452 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 SLCO1B3Q9NPD5 702 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 CYP26B1Q9NR63 512 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 C1orf112Q9NSG2 853 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 MTMR10Q9NXD2 777 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 DDX43Q9NXZ2 648 aaKnown RBP7.17□□□□□ -1.26
UBR4-212ENST00000475973 PSMC3IPQ9P2W1 217 aaPredicted RBP7.17□□□□□ -1.26
UBR4-212ENST00000475973 DNAJB4Q9UDY4 337 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 GTF2IRD1Q9UHL9 959 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 ZNF180Q9UJW8 692 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 TBX21Q9UL17 535 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 GNEQ9Y223 722 aaKnown RBP7.17□□□□□ -1.26
UBR4-212ENST00000475973 TBC1D30Q9Y2I9 924 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 RANBP2P49792 3224 aaKnown RBP7.17□□□□□ -1.26
UBR4-212ENST00000475973 IGKV6-21A0A0C4DH24 114 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 EXOC1LA0A1B0GW35 172 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 A0A1W2PPM1 405 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 ANKRD33BA6NCL7 494 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 CAPN14A8MX76 684 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 ZNF487B1APH4 448 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 PPP1R12AO14974 1030 aaPredicted RBP7.16□□□□□ -1.26
UBR4-212ENST00000475973 GSC2O15499 205 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 SPAG6O75602 509 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 TIMP1P01033 207 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 DLDP09622 509 aaKnown RBP7.16□□□□□ -1.26
UBR4-212ENST00000475973 TCF4P15884 667 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 SMPD1P17405 629 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 PROZP22891 400 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 GLRA2P23416 452 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 ALDH3A1P30838 453 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 MAGEA3P43357 314 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 RASSF2P50749 326 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 CLNS1AP54105 237 aaKnown RBP7.16□□□□□ -1.26
UBR4-212ENST00000475973 GEMIN4P57678 1058 aaKnown RBP7.16□□□□□ -1.26
UBR4-212ENST00000475973 RPL7AP62424 266 aaKnown RBP7.16□□□□□ -1.26
UBR4-212ENST00000475973 IRX1P78414 480 aaPredicted RBP7.16□□□□□ -1.26
UBR4-212ENST00000475973 ATP11AP98196 1134 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 BEX3Q00994 111 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 DNAJC3Q13217 504 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 ITGA7Q13683 1181 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 AGERQ15109 404 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 ZKSCAN8Q15776 578 aaPredicted RBP7.16□□□□□ -1.26
UBR4-212ENST00000475973 MAPK6Q16659 721 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 LINC01559Q495D7 138 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 DUSP28Q4G0W2 176 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 ATP13A4Q4VNC1 1196 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 TFDP3Q5H9I0 405 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 FAM102BQ5T8I3 360 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 CXCL17Q6UXB2 119 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 CENPUQ71F23 418 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 ADGRG6Q86SQ4 1221 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 PRUNE1Q86TP1 453 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 TRIM50Q86XT4 487 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 WDR49Q8IV35 697 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 PPIL6Q8IXY8 311 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 THNSL1Q8IYQ7 743 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 KIAA0319LQ8IZA0 1049 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 KIF2BQ8N4N8 673 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 ANKRD42Q8N9B4 389 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 SLC4A11Q8NBS3 891 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 RBBP8NLQ8NC74 664 aaPredicted RBP7.16□□□□□ -1.26
UBR4-212ENST00000475973 OR6J1Q8NGC5 347 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 CXorf38Q8TB03 319 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 MGARPQ8TDB4 240 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 DYDC1Q8WWB3 177 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 SLC44A1Q8WWI5 657 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 ERP27Q96DN0 273 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 THOC1Q96FV9 657 aaKnown RBP7.16□□□□□ -1.26
UBR4-212ENST00000475973 CDHR1Q96JP9 859 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 PI4K2AQ9BTU6 479 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 KIFC3Q9BVG8 833 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 CADM1Q9BY67 442 aaKnown RBP7.16□□□□□ -1.26
UBR4-212ENST00000475973 FRMD8Q9BZ67 464 aaPredicted RBP7.16□□□□□ -1.26
UBR4-212ENST00000475973 TRIM6Q9C030 488 aaPredicted RBP7.16□□□□□ -1.26
UBR4-212ENST00000475973 CCDC113Q9H0I3 377 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 XYLT2Q9H1B5 865 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 HIPK3Q9H422 1215 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 SAYSD1Q9NPB0 183 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 KCNK9Q9NPC2 374 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 ARHGEF4Q9NR80 690 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 AGO2Q9UKV8 859 aaKnown RBP7.16□□□□□ -1.26
UBR4-212ENST00000475973 TEX264Q9Y6I9 313 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 TRIOBPQ9H2D6 2365 aa7.16□□□□□ -1.26
UBR4-212ENST00000475973 FRMPD3Q5JV73 1810 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 F8W8V4 182 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms