RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 CEP295NLQ96MC4 621 aa11.12□□□□□ -0.63
CALD1-217ENST00000475772 USP28Q96RU2 1077 aa11.12□□□□□ -0.63
CALD1-217ENST00000475772 FNBP1Q96RU3 617 aa11.12□□□□□ -0.63
CALD1-217ENST00000475772 DPEP3Q9H4B8 488 aa11.12□□□□□ -0.63
CALD1-217ENST00000475772 ZDHHC4Q9NPG8 344 aa11.12□□□□□ -0.63
CALD1-217ENST00000475772 TMEM74BQ9NUR3 256 aa11.12□□□□□ -0.63
CALD1-217ENST00000475772 TRPM5Q9NZQ8 1165 aa11.12□□□□□ -0.63
CALD1-217ENST00000475772 MBD1Q9UIS9 605 aaPredicted RBP11.12□□□□□ -0.63
CALD1-217ENST00000475772 HCN2Q9UL51 889 aa11.12□□□□□ -0.63
CALD1-217ENST00000475772 CPQQ9Y646 472 aa11.12□□□□□ -0.63
CALD1-217ENST00000475772 MORC2Q9Y6X9 1032 aaPredicted RBP11.12□□□□□ -0.63
CALD1-217ENST00000475772 DMXL2Q8TDJ6 3036 aa11.11□□□□□ -0.63
CALD1-217ENST00000475772 KNL1Q8NG31 2342 aa11.11□□□□□ -0.63
CALD1-217ENST00000475772 MAN1A2O60476 641 aa11.11□□□□□ -0.63
CALD1-217ENST00000475772 ADAM23O75077 832 aa11.11□□□□□ -0.63
CALD1-217ENST00000475772 SYT1P21579 422 aa11.11□□□□□ -0.63
CALD1-217ENST00000475772 GNL1P36915 607 aaPredicted RBP11.11□□□□□ -0.63
CALD1-217ENST00000475772 P2RY2P41231 377 aa11.11□□□□□ -0.63
CALD1-217ENST00000475772 NOVA1P51513 510 aaKnown RBP11.11□□□□□ -0.63
CALD1-217ENST00000475772 NOP14P78316 857 aaKnown RBP11.11□□□□□ -0.63
CALD1-217ENST00000475772 MRPS21P82921 87 aaKnown RBP11.11□□□□□ -0.63
CALD1-217ENST00000475772 CYP27A1Q02318 531 aa11.11□□□□□ -0.63
CALD1-217ENST00000475772 TAF10Q12962 218 aa11.11□□□□□ -0.63
CALD1-217ENST00000475772 MYO1EQ12965 1108 aa11.11□□□□□ -0.63
CALD1-217ENST00000475772 CLN3Q13286 438 aa11.11□□□□□ -0.63
CALD1-217ENST00000475772 ALCAMQ13740 583 aa11.11□□□□□ -0.63
CALD1-217ENST00000475772 SLC39A14Q15043 492 aa11.11□□□□□ -0.63
CALD1-217ENST00000475772 DUOXA2Q1HG44 320 aa11.11□□□□□ -0.63
CALD1-217ENST00000475772 MDH1BQ5I0G3 518 aa11.11□□□□□ -0.63
CALD1-217ENST00000475772 SH3PXD2AQ5TCZ1 1133 aa11.11□□□□□ -0.63
CALD1-217ENST00000475772 CCDC73Q6ZRK6 1079 aa11.11□□□□□ -0.63
CALD1-217ENST00000475772 PAQR9Q6ZVX9 377 aa11.11□□□□□ -0.63
CALD1-217ENST00000475772 EPM2AIP1Q7L775 607 aaPredicted RBP11.11□□□□□ -0.63
CALD1-217ENST00000475772 DEPDC4Q8N2C3 294 aa11.11□□□□□ -0.63
CALD1-217ENST00000475772 ALLCQ8N6M5 410 aa11.11□□□□□ -0.63
CALD1-217ENST00000475772 PDILTQ8N807 584 aa11.11□□□□□ -0.63
CALD1-217ENST00000475772 KIAA1958Q8N8K9 716 aa11.11□□□□□ -0.63
CALD1-217ENST00000475772 TXNDC5Q8NBS9 432 aaKnown RBP11.11□□□□□ -0.63
CALD1-217ENST00000475772 RNF217Q8TC41 542 aa11.11□□□□□ -0.63
CALD1-217ENST00000475772 ZNF507Q8TCN5 953 aa11.11□□□□□ -0.63
CALD1-217ENST00000475772 WBP2Q969T9 261 aa11.11□□□□□ -0.63
CALD1-217ENST00000475772 C8orf48Q96LL4 319 aa11.11□□□□□ -0.63
CALD1-217ENST00000475772 POLMQ9NP87 494 aaPredicted RBP11.11□□□□□ -0.63
CALD1-217ENST00000475772 SMPD4Q9NXE4 827 aa11.11□□□□□ -0.63
CALD1-217ENST00000475772 HSPBP1Q9NZL4 362 aa11.11□□□□□ -0.63
CALD1-217ENST00000475772 TFIP11Q9UBB9 837 aaKnown RBP11.11□□□□□ -0.63
CALD1-217ENST00000475772 FIGNL2A6NMB9 653 aa11.1□□□□□ -0.63
CALD1-217ENST00000475772 CLDN5O00501 218 aa11.1□□□□□ -0.63
CALD1-217ENST00000475772 KHNYNO15037 678 aaKnown RBP11.1□□□□□ -0.63
CALD1-217ENST00000475772 KIAA0391O15091 583 aaKnown RBP11.1□□□□□ -0.63
CALD1-217ENST00000475772 CLIC2O15247 247 aa11.1□□□□□ -0.63
CALD1-217ENST00000475772 TACC1O75410 805 aa11.1□□□□□ -0.63
CALD1-217ENST00000475772 KLF8O95600 359 aaPredicted RBP11.1□□□□□ -0.63
CALD1-217ENST00000475772 FAM163BP0C2L3 166 aa11.1□□□□□ -0.63
CALD1-217ENST00000475772 PTPN1P18031 435 aaKnown RBP11.1□□□□□ -0.63
CALD1-217ENST00000475772 CSRP1P21291 193 aaKnown RBP11.1□□□□□ -0.63
CALD1-217ENST00000475772 STAT6P42226 847 aa11.1□□□□□ -0.63
CALD1-217ENST00000475772 PPP3CCP48454 512 aa11.1□□□□□ -0.63
CALD1-217ENST00000475772 DHPSP49366 369 aaPredicted RBP11.1□□□□□ -0.63
CALD1-217ENST00000475772 RNF144AP50876 292 aaPredicted RBP11.1□□□□□ -0.63
CALD1-217ENST00000475772 SURF1Q15526 300 aa11.1□□□□□ -0.63
CALD1-217ENST00000475772 MAPRE1Q15691 268 aaKnown RBP11.1□□□□□ -0.63
CALD1-217ENST00000475772 WDR49Q8IV35 697 aa11.1□□□□□ -0.63
CALD1-217ENST00000475772 PIGKQ92643 395 aa11.1□□□□□ -0.63
CALD1-217ENST00000475772 KCNK16Q96T55 309 aa11.1□□□□□ -0.63
CALD1-217ENST00000475772 PNKPQ96T60 521 aa11.1□□□□□ -0.63
CALD1-217ENST00000475772 MMS19Q96T76 1030 aa11.1□□□□□ -0.63
CALD1-217ENST00000475772 B3GNT5Q9BYG0 378 aa11.1□□□□□ -0.63
CALD1-217ENST00000475772 ZNF518BQ9C0D4 1074 aa11.1□□□□□ -0.63
CALD1-217ENST00000475772 RAB6BQ9NRW1 208 aa11.1□□□□□ -0.63
CALD1-217ENST00000475772 KBTBD4Q9NVX7 518 aa11.1□□□□□ -0.63
CALD1-217ENST00000475772 CHORDC1Q9UHD1 332 aaPredicted RBP11.1□□□□□ -0.63
CALD1-217ENST00000475772 MTMR6Q9Y217 621 aa11.1□□□□□ -0.63
CALD1-217ENST00000475772 PCDHGA11Q9Y5H2 935 aa11.1□□□□□ -0.63
CALD1-217ENST00000475772 ZFYVE26Q68DK2 2539 aa11.1□□□□□ -0.63
CALD1-217ENST00000475772 LAMA5O15230 3695 aa11.1□□□□□ -0.63
CALD1-217ENST00000475772 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.09□□□□□ -0.63
CALD1-217ENST00000475772 MEN1O00255 615 aa11.09□□□□□ -0.63
CALD1-217ENST00000475772 TNFRSF10BO14763 440 aa11.09□□□□□ -0.63
CALD1-217ENST00000475772 TRIM24O15164 1050 aa11.09□□□□□ -0.63
CALD1-217ENST00000475772 KAT7O95251 611 aa11.09□□□□□ -0.63
CALD1-217ENST00000475772 ABL1P00519 1130 aa11.09□□□□□ -0.63
CALD1-217ENST00000475772 IL2RAP01589 272 aa11.09□□□□□ -0.63
CALD1-217ENST00000475772 TNNC2P02585 160 aa11.09□□□□□ -0.63
CALD1-217ENST00000475772 CEACAM1P13688 526 aa11.09□□□□□ -0.63
CALD1-217ENST00000475772 EIF2DP41214 584 aaKnown RBP11.09□□□□□ -0.63
CALD1-217ENST00000475772 PTGER3P43115 390 aa11.09□□□□□ -0.63
CALD1-217ENST00000475772 PGFP49763 221 aa11.09□□□□□ -0.63
CALD1-217ENST00000475772 EHHADHQ08426 723 aa11.09□□□□□ -0.63
CALD1-217ENST00000475772 ZNF252P-AS1Q0IIN9 211 aa11.09□□□□□ -0.63
CALD1-217ENST00000475772 LY6G5CQ5SRR4 150 aa11.09□□□□□ -0.63
CALD1-217ENST00000475772 DAB2IPQ5VWQ8 1189 aa11.09□□□□□ -0.63
CALD1-217ENST00000475772 UNQ6494/PRO21346Q6UXR6 183 aa11.09□□□□□ -0.63
CALD1-217ENST00000475772 HS2ST1Q7LGA3 356 aa11.09□□□□□ -0.63
CALD1-217ENST00000475772 C11orf74Q86VG3 221 aa11.09□□□□□ -0.63
CALD1-217ENST00000475772 ETFBKMTQ8IXQ9 262 aa11.09□□□□□ -0.63
CALD1-217ENST00000475772 CCDC65Q8IXS2 484 aa11.09□□□□□ -0.63
CALD1-217ENST00000475772 TMEFF1Q8IYR6 380 aa11.09□□□□□ -0.63
CALD1-217ENST00000475772 OR6B3Q8NGW1 331 aa11.09□□□□□ -0.63
CALD1-217ENST00000475772 CCDC26Q8TAB7 109 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms