RNA–Protein interactions for RNA: ENST00000474319.1

LSS-208, Transcript of lanosterol synthase, human

TSL 2

Gene LSS, Length 3,601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSS-208	ENST00000474319	TRIM72	Q6ZMU5	477 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	DENND5B	Q6ZUT9	1274 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	NAT8L	Q8N9F0	302 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	NDRG1	Q92597	394 aa	Known RBP	11.16	□□□□□ -0.62
LSS-208	ENST00000474319	MFHAS1	Q9Y4C4	1052 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	MYH9	P35579	1960 aa	Known RBP	11.16	□□□□□ -0.62
LSS-208	ENST00000474319	CNTNAP2	Q9UHC6	1331 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	SIPA1L1	O43166	1804 aa		11.15	□□□□□ -0.62
LSS-208	ENST00000474319	ASS1	P00966	412 aa	Known RBP	11.15	□□□□□ -0.62
LSS-208	ENST00000474319	ABHD2	P08910	425 aa		11.15	□□□□□ -0.62
LSS-208	ENST00000474319	TFE3	P19532	575 aa	Predicted RBP	11.15	□□□□□ -0.62
LSS-208	ENST00000474319	VHL	P40337	213 aa		11.15	□□□□□ -0.62
LSS-208	ENST00000474319	STAT5B	P51692	787 aa		11.15	□□□□□ -0.62
LSS-208	ENST00000474319	CACNA2D1	P54289	1103 aa		11.15	□□□□□ -0.62
LSS-208	ENST00000474319	CA9	Q16790	459 aa		11.15	□□□□□ -0.62
LSS-208	ENST00000474319	ABHD15	Q6UXT9	468 aa		11.15	□□□□□ -0.62
LSS-208	ENST00000474319	RIBC1	Q8N443	379 aa	Predicted RBP	11.15	□□□□□ -0.62
LSS-208	ENST00000474319	SLC35B2	Q8TB61	432 aa		11.15	□□□□□ -0.62
LSS-208	ENST00000474319	RXFP2	Q8WXD0	754 aa		11.15	□□□□□ -0.62
LSS-208	ENST00000474319	AGAP3	Q96P47	875 aa		11.15	□□□□□ -0.62
LSS-208	ENST00000474319	GBA2	Q9HCG7	927 aa	Predicted RBP	11.15	□□□□□ -0.62
LSS-208	ENST00000474319	ATAD5	Q96QE3	1844 aa		11.15	□□□□□ -0.62
LSS-208	ENST00000474319	hCG_2014768	A0A024R1R8	64 aa		11.15	□□□□□ -0.62
LSS-208	ENST00000474319	CCDC160	A6NGH7	325 aa		11.15	□□□□□ -0.62
LSS-208	ENST00000474319	PRPSAP2	O60256	369 aa		11.15	□□□□□ -0.62
LSS-208	ENST00000474319	DGKI	O75912	1065 aa		11.15	□□□□□ -0.62
LSS-208	ENST00000474319	TNNC2	P02585	160 aa		11.15	□□□□□ -0.62
LSS-208	ENST00000474319	SP100	P23497	879 aa	Predicted RBP	11.15	□□□□□ -0.62
LSS-208	ENST00000474319	SERPINB6	P35237	376 aa		11.15	□□□□□ -0.62
LSS-208	ENST00000474319	TCF7	P36402	384 aa	Predicted RBP	11.15	□□□□□ -0.62
LSS-208	ENST00000474319	CDK16	Q00536	496 aa		11.15	□□□□□ -0.62
LSS-208	ENST00000474319	PARP6	Q2NL67	630 aa		11.15	□□□□□ -0.62
LSS-208	ENST00000474319	ZNF667	Q5HYK9	610 aa		11.15	□□□□□ -0.62
LSS-208	ENST00000474319	LPCAT4	Q643R3	524 aa		11.15	□□□□□ -0.62
LSS-208	ENST00000474319	NTPCR	Q9BSD7	190 aa	Known RBP	11.15	□□□□□ -0.62
LSS-208	ENST00000474319	ZNF358	Q9NW07	568 aa		11.15	□□□□□ -0.62
LSS-208	ENST00000474319	SLC24A2	Q9UI40	661 aa		11.15	□□□□□ -0.62
LSS-208	ENST00000474319	SCOC	Q9UIL1	159 aa		11.15	□□□□□ -0.62
LSS-208	ENST00000474319	ACTL7B	Q9Y614	415 aa		11.15	□□□□□ -0.62
LSS-208	ENST00000474319	MKI67	P46013	3256 aa	Known RBP	11.15	□□□□□ -0.62
LSS-208	ENST00000474319	GOLGA8T	H3BQL2	631 aa		11.15	□□□□□ -0.63
LSS-208	ENST00000474319	USP12	O75317	370 aa		11.15	□□□□□ -0.63
LSS-208	ENST00000474319	ITGAV	P06756	1048 aa		11.15	□□□□□ -0.63
LSS-208	ENST00000474319	C6orf222	P0C671	652 aa	Predicted RBP	11.15	□□□□□ -0.63
LSS-208	ENST00000474319	CSH1	P0DML2	217 aa		11.15	□□□□□ -0.63
LSS-208	ENST00000474319	CSH2	P0DML3	217 aa		11.15	□□□□□ -0.63
LSS-208	ENST00000474319	OSBP	P22059	807 aa		11.15	□□□□□ -0.63
LSS-208	ENST00000474319	RABGGTB	P53611	331 aa		11.15	□□□□□ -0.63
LSS-208	ENST00000474319	BCAR1	P56945	870 aa		11.15	□□□□□ -0.63
LSS-208	ENST00000474319	CTC1	Q2NKJ3	1217 aa		11.15	□□□□□ -0.63
LSS-208	ENST00000474319	GLRA4	Q5JXX5	417 aa		11.15	□□□□□ -0.63
LSS-208	ENST00000474319	RIPOR1	Q6ZS17	1223 aa		11.15	□□□□□ -0.63
LSS-208	ENST00000474319	SESTD1	Q86VW0	696 aa		11.15	□□□□□ -0.63
LSS-208	ENST00000474319	E2F7	Q96AV8	911 aa		11.15	□□□□□ -0.63
LSS-208	ENST00000474319	SDCBP2	Q9H190	292 aa		11.15	□□□□□ -0.63
LSS-208	ENST00000474319	KCNK13	Q9HB14	408 aa		11.15	□□□□□ -0.63
LSS-208	ENST00000474319	SMYD2	Q9NRG4	433 aa		11.15	□□□□□ -0.63
LSS-208	ENST00000474319	PPM1H	Q9ULR3	514 aa		11.15	□□□□□ -0.63
LSS-208	ENST00000474319	CORO1C	Q9ULV4	474 aa	Predicted RBP	11.15	□□□□□ -0.63
LSS-208	ENST00000474319	NEMP1	O14524	444 aa		11.14	□□□□□ -0.63
LSS-208	ENST00000474319	ZC3H11A	O75152	810 aa	Known RBP eCLIP	11.14	□□□□□ -0.63	2e-7	■■■□□ 16
LSS-208	ENST00000474319	ADORA2A	P29274	412 aa		11.14	□□□□□ -0.63
LSS-208	ENST00000474319	PPM1J	Q5JR12	505 aa		11.14	□□□□□ -0.63
LSS-208	ENST00000474319	ADGRD1	Q6QNK2	874 aa		11.14	□□□□□ -0.63
LSS-208	ENST00000474319	DEPDC1B	Q8WUY9	529 aa		11.14	□□□□□ -0.63
LSS-208	ENST00000474319	INPP5D	Q92835	1189 aa		11.14	□□□□□ -0.63
LSS-208	ENST00000474319	LENG1	Q96BZ8	264 aa	Predicted RBP	11.14	□□□□□ -0.63
LSS-208	ENST00000474319	PAPOLB	Q9NRJ5	636 aa	Known RBP	11.14	□□□□□ -0.63
LSS-208	ENST00000474319	SENP1	Q9P0U3	644 aa		11.14	□□□□□ -0.63
LSS-208	ENST00000474319	TTLL3	Q9Y4R7	772 aa		11.14	□□□□□ -0.63
LSS-208	ENST00000474319	CIB2	O75838	187 aa		11.14	□□□□□ -0.63
LSS-208	ENST00000474319	SKI	P12755	728 aa		11.14	□□□□□ -0.63
LSS-208	ENST00000474319	GJA5	P36382	358 aa		11.14	□□□□□ -0.63
LSS-208	ENST00000474319	SLC25A11	Q02978	314 aa	Known RBP	11.14	□□□□□ -0.63
LSS-208	ENST00000474319	SNAPC2	Q13487	334 aa		11.14	□□□□□ -0.63
LSS-208	ENST00000474319	SLFN12L	Q6IEE8	588 aa		11.14	□□□□□ -0.63
LSS-208	ENST00000474319	SLC30A9	Q6PML9	568 aa		11.14	□□□□□ -0.63
LSS-208	ENST00000474319	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	11.14	□□□□□ -0.63
LSS-208	ENST00000474319	GBP5	Q96PP8	586 aa		11.14	□□□□□ -0.63
LSS-208	ENST00000474319	VPS11	Q9H270	941 aa		11.14	□□□□□ -0.63
LSS-208	ENST00000474319	DHX35	Q9H5Z1	703 aa	Known RBP	11.14	□□□□□ -0.63
LSS-208	ENST00000474319	TMPRSS4	Q9NRS4	437 aa		11.14	□□□□□ -0.63
LSS-208	ENST00000474319	FARP1	Q9Y4F1	1045 aa	Predicted RBP	11.14	□□□□□ -0.63
LSS-208	ENST00000474319	GOLGA8Q	A0A0J9YX86	632 aa		11.14	□□□□□ -0.63
LSS-208	ENST00000474319	GOLGA8O	A6NCC3	632 aa		11.14	□□□□□ -0.63
LSS-208	ENST00000474319	GOLGA8N	F8WBI6	632 aa		11.14	□□□□□ -0.63
LSS-208	ENST00000474319	MICAL2	O94851	1124 aa		11.14	□□□□□ -0.63
LSS-208	ENST00000474319	KRT7	P08729	469 aa		11.14	□□□□□ -0.63
LSS-208	ENST00000474319	PDGFRB	P09619	1106 aa		11.14	□□□□□ -0.63
LSS-208	ENST00000474319	DLD	P09622	509 aa	Known RBP	11.14	□□□□□ -0.63
LSS-208	ENST00000474319	TXN	P10599	105 aa	Known RBP	11.14	□□□□□ -0.63
LSS-208	ENST00000474319	CYP2B6	P20813	491 aa		11.14	□□□□□ -0.63
LSS-208	ENST00000474319	POLR2B	P30876	1174 aa	Known RBP	11.14	□□□□□ -0.63
LSS-208	ENST00000474319	SKIV2L2	P42285	1042 aa	Known RBP	11.14	□□□□□ -0.63
LSS-208	ENST00000474319	PPP1R15B	Q5SWA1	713 aa		11.14	□□□□□ -0.63
LSS-208	ENST00000474319	USP50	Q70EL3	339 aa	Predicted RBP	11.14	□□□□□ -0.63
LSS-208	ENST00000474319	TNS4	Q8IZW8	715 aa		11.14	□□□□□ -0.63
LSS-208	ENST00000474319	ADAM32	Q8TC27	787 aa		11.14	□□□□□ -0.63
LSS-208	ENST00000474319	SH3TC2	Q8TF17	1288 aa		11.14	□□□□□ -0.63
LSS-208	ENST00000474319	APOPT1	Q96IL0	206 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms