RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 TXNRD3Q86VQ6 643 aa6.36□□□□□ -1.39
SMARCE1-208ENST00000474246 VSIG10LQ86VR7 867 aa6.36□□□□□ -1.39
SMARCE1-208ENST00000474246 TMEM200AQ86VY9 491 aa6.36□□□□□ -1.39
SMARCE1-208ENST00000474246 MICU3Q86XE3 530 aa6.36□□□□□ -1.39
SMARCE1-208ENST00000474246 THNSL1Q8IYQ7 743 aa6.36□□□□□ -1.39
SMARCE1-208ENST00000474246 CACNA2D3Q8IZS8 1091 aa6.36□□□□□ -1.39
SMARCE1-208ENST00000474246 ZBTB34Q8NCN2 500 aa6.36□□□□□ -1.39
SMARCE1-208ENST00000474246 FAM13CQ8NE31 585 aa6.36□□□□□ -1.39
SMARCE1-208ENST00000474246 ANKS1AQ92625 1134 aa6.36□□□□□ -1.39
SMARCE1-208ENST00000474246 PEX13Q92968 403 aa6.36□□□□□ -1.39
SMARCE1-208ENST00000474246 NKD1Q969G9 470 aa6.36□□□□□ -1.39
SMARCE1-208ENST00000474246 RBM41Q96IZ5 413 aaKnown RBP6.36□□□□□ -1.39
SMARCE1-208ENST00000474246 IFT74Q96LB3 600 aa6.36□□□□□ -1.39
SMARCE1-208ENST00000474246 PRAM1Q96QH2 718 aa6.36□□□□□ -1.39
SMARCE1-208ENST00000474246 FERD3LQ96RJ6 166 aa6.36□□□□□ -1.39
SMARCE1-208ENST00000474246 SH3GL2Q99962 352 aa6.36□□□□□ -1.39
SMARCE1-208ENST00000474246 AIFM2Q9BRQ8 373 aa6.36□□□□□ -1.39
SMARCE1-208ENST00000474246 TRIM62Q9BVG3 475 aa6.36□□□□□ -1.39
SMARCE1-208ENST00000474246 CCDC86Q9H6F5 360 aaKnown RBP6.36□□□□□ -1.39
SMARCE1-208ENST00000474246 LRRC19Q9H756 370 aa6.36□□□□□ -1.39
SMARCE1-208ENST00000474246 SYNDIG1Q9H7V2 258 aa6.36□□□□□ -1.39
SMARCE1-208ENST00000474246 COPS7BQ9H9Q2 264 aaPredicted RBP6.36□□□□□ -1.39
SMARCE1-208ENST00000474246 FAM86C1Q9NVL1 165 aa6.36□□□□□ -1.39
SMARCE1-208ENST00000474246 POLR3BQ9NW08 1133 aaPredicted RBP6.36□□□□□ -1.39
SMARCE1-208ENST00000474246 MYO6Q9UM54 1294 aa6.36□□□□□ -1.39
SMARCE1-208ENST00000474246 MAGED2Q9UNF1 606 aaPredicted RBP6.36□□□□□ -1.39
SMARCE1-208ENST00000474246 PCDHB4Q9Y5E5 795 aa6.36□□□□□ -1.39
SMARCE1-208ENST00000474246 USP42Q9H9J4 1324 aaKnown RBP6.36□□□□□ -1.39
SMARCE1-208ENST00000474246 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 A0A1B0GWJ7 208 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 HEATR9A2RTY3 570 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 CCDC162PA2VCL2 907 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 SPDYE3A6NKU9 549 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 CLN5O75503 358 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 IDH1O75874 414 aaKnown RBP6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 ERLIN2O94905 339 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 ADH1CP00326 375 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 WEE2P0C1S8 567 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 BPIP17213 487 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 HTR2BP41595 481 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 GBX2P52951 348 aaPredicted RBP6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 INHBCP55103 352 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 LRMPQ12912 555 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 PLD1Q13393 1074 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 FOXB2Q5VYV0 432 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 IZUMO3Q5VZ72 239 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 IQSEC1Q6DN90 963 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 ATCAYQ86WG3 371 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 CARFQ8N187 725 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 TSPYL6Q8N831 410 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 ZNF527Q8NB42 609 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 HUS1BQ8NHY5 278 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 SMARCC2Q8TAQ2 1214 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 MYCBPAPQ8TBZ2 947 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 ENKURQ8TC29 256 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 OPTNQ96CV9 577 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 HDAC11Q96DB2 347 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 EXOC2Q96KP1 924 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 CDK5RAP1Q96SZ6 601 aaKnown RBP6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 ACO2Q99798 780 aaKnown RBP6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 PINK1Q9BXM7 581 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 FAM129AQ9BZQ8 928 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 PAIP1Q9H074 479 aaKnown RBP6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 ISCUQ9H1K1 167 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 KCNK13Q9HB14 408 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 MID1IP1Q9NPA3 183 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 GCOM1H8Y6P7 765 aaPredicted RBP6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 PER2O15055 1255 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 SCAMP1O15126 338 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 DCXO43602 365 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 IDH3BO43837 385 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 LRRN2O75325 713 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 TMCC1O94876 653 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 SEC31AO94979 1220 aaKnown RBP6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 CRTAMO95727 393 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 SERPINB2P05120 415 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 FESP07332 822 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 MYZAPP0CAP1 466 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 IGFBP4P22692 258 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 S100A1P23297 94 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 TLX1P31314 330 aaPredicted RBP6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 WNT5AP41221 380 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 GCLCP48506 637 aaPredicted RBP6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 DHPSP49366 369 aaPredicted RBP6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 MAPK10P53779 464 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 YWHAZP63104 245 aaKnown RBP6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 ASIC1P78348 528 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 ABATP80404 500 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 TMEM62Q0P6H9 643 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 ITPK1Q13572 414 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 FBXW10Q5XX13 1052 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 SLC25A24Q6NUK1 477 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 JMJD6Q6NYC1 403 aaPredicted RBP6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 TAF2Q6P1X5 1199 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 SEZ6L2Q6UXD5 910 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 RFX6Q8HWS3 928 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 SLITRK4Q8IW52 837 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 ADSSL1Q8N142 457 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms