RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 NUDT18Q6ZVK8 323 aa19.61■□□□□ 0.73
CCDC171-206ENST00000474193 ARHGAP18Q8N392 663 aa19.61■□□□□ 0.73
CCDC171-206ENST00000474193 ANKRD52Q8NB46 1076 aa19.61■□□□□ 0.73
CCDC171-206ENST00000474193 SLC4A11Q8NBS3 891 aa19.61■□□□□ 0.73
CCDC171-206ENST00000474193 CHFRQ96EP1 664 aa19.61■□□□□ 0.73
CCDC171-206ENST00000474193 LIMA1Q9UHB6 759 aaKnown RBP19.61■□□□□ 0.73
CCDC171-206ENST00000474193 NAGPAQ9UK23 515 aa19.61■□□□□ 0.73
CCDC171-206ENST00000474193 HELZP42694 1942 aaKnown RBP19.61■□□□□ 0.73
CCDC171-206ENST00000474193 LILRB5O75023 590 aa19.6■□□□□ 0.73
CCDC171-206ENST00000474193 SERPINC1P01008 464 aa19.6■□□□□ 0.73
CCDC171-206ENST00000474193 EGFP01133 1207 aa19.6■□□□□ 0.73
CCDC171-206ENST00000474193 KIF11P52732 1056 aa19.6■□□□□ 0.73
CCDC171-206ENST00000474193 ZXDBP98169 803 aa19.6■□□□□ 0.73
CCDC171-206ENST00000474193 DHCR24Q15392 516 aa19.6■□□□□ 0.73
CCDC171-206ENST00000474193 ARHGAP17Q68EM7 881 aa19.6■□□□□ 0.73
CCDC171-206ENST00000474193 LONP2Q86WA8 852 aa19.6■□□□□ 0.73
CCDC171-206ENST00000474193 EHBP1Q8NDI1 1231 aa19.6■□□□□ 0.73
CCDC171-206ENST00000474193 ACDQ96AP0 544 aa19.6■□□□□ 0.73
CCDC171-206ENST00000474193 DNMT3LQ9UJW3 386 aa19.6■□□□□ 0.73
CCDC171-206ENST00000474193 FANCMQ8IYD8 2048 aa19.59■□□□□ 0.73
CCDC171-206ENST00000474193 GTPBP10A4D1E9 387 aaKnown RBP19.59■□□□□ 0.73
CCDC171-206ENST00000474193 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.59■□□□□ 0.73
CCDC171-206ENST00000474193 RNF40O75150 1001 aa19.59■□□□□ 0.73
CCDC171-206ENST00000474193 VDRP11473 427 aa19.59■□□□□ 0.73
CCDC171-206ENST00000474193 RARGP13631 454 aa19.59■□□□□ 0.73
CCDC171-206ENST00000474193 PLA2G4AP47712 749 aa19.59■□□□□ 0.73
CCDC171-206ENST00000474193 COPB1P53618 953 aaKnown RBP19.59■□□□□ 0.73
CCDC171-206ENST00000474193 GAD2Q05329 585 aa19.59■□□□□ 0.73
CCDC171-206ENST00000474193 EXOC3L4Q17RC7 722 aa19.59■□□□□ 0.73
CCDC171-206ENST00000474193 C10orf120Q5SQS8 335 aa19.59■□□□□ 0.73
CCDC171-206ENST00000474193 CCDC186Q7Z3E2 898 aa19.59■□□□□ 0.73
CCDC171-206ENST00000474193 PPM1KQ8N3J5 372 aa19.59■□□□□ 0.73
CCDC171-206ENST00000474193 GPR161Q8N6U8 529 aaKnown RBP19.59■□□□□ 0.73
CCDC171-206ENST00000474193 RNF214Q8ND24 703 aa19.59■□□□□ 0.73
CCDC171-206ENST00000474193 PNKPQ96T60 521 aa19.59■□□□□ 0.73
CCDC171-206ENST00000474193 ARID3AQ99856 593 aa19.59■□□□□ 0.73
CCDC171-206ENST00000474193 CYLDQ9NQC7 956 aa19.59■□□□□ 0.73
CCDC171-206ENST00000474193 GMEB2Q9UKD1 530 aa19.59■□□□□ 0.73
CCDC171-206ENST00000474193 PCDHB4Q9Y5E5 795 aa19.59■□□□□ 0.73
CCDC171-206ENST00000474193 FAM186AA6NE01 2351 aa19.59■□□□□ 0.73
CCDC171-206ENST00000474193 LRRC10BA6NIK2 292 aa19.58■□□□□ 0.72
CCDC171-206ENST00000474193 CHURC1-FNTBB4DL54 471 aa19.58■□□□□ 0.72
CCDC171-206ENST00000474193 HHLA1C9JL84 531 aa19.58■□□□□ 0.72
CCDC171-206ENST00000474193 CYP26A1O43174 497 aa19.58■□□□□ 0.72
CCDC171-206ENST00000474193 APODP05090 189 aa19.58■□□□□ 0.72
CCDC171-206ENST00000474193 CYP17A1P05093 508 aa19.58■□□□□ 0.72
CCDC171-206ENST00000474193 IRF1P10914 325 aa19.58■□□□□ 0.72
CCDC171-206ENST00000474193 ADH5P11766 374 aa19.58■□□□□ 0.72
CCDC171-206ENST00000474193 ATP1A3P13637 1013 aa19.58■□□□□ 0.72
CCDC171-206ENST00000474193 HOXA6P31267 233 aa19.58■□□□□ 0.72
CCDC171-206ENST00000474193 BCAT1P54687 386 aa19.58■□□□□ 0.72
CCDC171-206ENST00000474193 MIIPQ5JXC2 388 aa19.58■□□□□ 0.72
CCDC171-206ENST00000474193 HEATR6Q6AI08 1181 aaKnown RBP19.58■□□□□ 0.72
CCDC171-206ENST00000474193 KLHDC10Q6PID8 442 aa19.58■□□□□ 0.72
CCDC171-206ENST00000474193 CAMKK1Q8N5S9 505 aa19.58■□□□□ 0.72
CCDC171-206ENST00000474193 SUMF1Q8NBK3 374 aa19.58■□□□□ 0.72
CCDC171-206ENST00000474193 HSD3B7Q9H2F3 369 aa19.58■□□□□ 0.72
CCDC171-206ENST00000474193 EPC1Q9H2F5 836 aa19.58■□□□□ 0.72
CCDC171-206ENST00000474193 LRRC4Q9HBW1 653 aa19.58■□□□□ 0.72
CCDC171-206ENST00000474193 FBRSL1Q9HCM7 1045 aaKnown RBP19.58■□□□□ 0.72
CCDC171-206ENST00000474193 CLIC5Q9NZA1 410 aa19.58■□□□□ 0.72
CCDC171-206ENST00000474193 A0A1W2PQH9 124 aa19.57■□□□□ 0.72
CCDC171-206ENST00000474193 PAEPP09466 180 aa19.57■□□□□ 0.72
CCDC171-206ENST00000474193 EIF2DP41214 584 aaKnown RBP19.57■□□□□ 0.72
CCDC171-206ENST00000474193 FNTBP49356 437 aa19.57■□□□□ 0.72
CCDC171-206ENST00000474193 COG7P83436 770 aa19.57■□□□□ 0.72
CCDC171-206ENST00000474193 UBXN1Q04323 297 aa19.57■□□□□ 0.72
CCDC171-206ENST00000474193 SIM2Q14190 667 aaPredicted RBP19.57■□□□□ 0.72
CCDC171-206ENST00000474193 STILQ15468 1287 aa19.57■□□□□ 0.72
CCDC171-206ENST00000474193 RHBDF2Q6PJF5 856 aa19.57■□□□□ 0.72
CCDC171-206ENST00000474193 TMEM270Q6UE05 265 aa19.57■□□□□ 0.72
CCDC171-206ENST00000474193 PRR23BQ6ZRT6 265 aa19.57■□□□□ 0.72
CCDC171-206ENST00000474193 CEP68Q76N32 757 aa19.57■□□□□ 0.72
CCDC171-206ENST00000474193 RSRC2Q7L4I2 434 aaKnown RBP19.57■□□□□ 0.72
CCDC171-206ENST00000474193 GPRIN1Q7Z2K8 1008 aa19.57■□□□□ 0.72
CCDC171-206ENST00000474193 PIGZQ86VD9 579 aa19.57■□□□□ 0.72
CCDC171-206ENST00000474193 ZNF276Q8N554 614 aa19.57■□□□□ 0.72
CCDC171-206ENST00000474193 RPLP0P6Q8NHW5 317 aa19.57■□□□□ 0.72
CCDC171-206ENST00000474193 CRACR2AQ9BSW2 395 aa19.57■□□□□ 0.72
CCDC171-206ENST00000474193 INTS2Q9H0H0 1204 aaKnown RBP19.57■□□□□ 0.72
CCDC171-206ENST00000474193 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.57■□□□□ 0.72
CCDC171-206ENST00000474193 TSPAN16Q9UKR8 245 aa19.57■□□□□ 0.72
CCDC171-206ENST00000474193 STRIP2Q9ULQ0 834 aa19.57■□□□□ 0.72
CCDC171-206ENST00000474193 SMG5Q9UPR3 1016 aaKnown RBP19.57■□□□□ 0.72
CCDC171-206ENST00000474193 USP3Q9Y6I4 520 aa19.57■□□□□ 0.72
CCDC171-206ENST00000474193 CCDC163A0A0D9SF12 145 aa19.56■□□□□ 0.72
CCDC171-206ENST00000474193 SCAMP3O14828 347 aaKnown RBP19.56■□□□□ 0.72
CCDC171-206ENST00000474193 TDGF1P13385 188 aa19.56■□□□□ 0.72
CCDC171-206ENST00000474193 BST2Q10589 180 aaKnown RBP19.56■□□□□ 0.72
CCDC171-206ENST00000474193 GOLGA7BQ2TAP0 167 aa19.56■□□□□ 0.72
CCDC171-206ENST00000474193 ANO4Q32M45 955 aa19.56■□□□□ 0.72
CCDC171-206ENST00000474193 LY6G5CQ5SRR4 150 aa19.56■□□□□ 0.72
CCDC171-206ENST00000474193 HTR3DQ70Z44 454 aa19.56■□□□□ 0.72
CCDC171-206ENST00000474193 ZFRQ96KR1 1074 aaKnown RBP19.56■□□□□ 0.72
CCDC171-206ENST00000474193 FAM81BQ96LP2 452 aa19.56■□□□□ 0.72
CCDC171-206ENST00000474193 PCMTD1Q96MG8 357 aaPredicted RBP19.56■□□□□ 0.72
CCDC171-206ENST00000474193 KLF16Q9BXK1 252 aaPredicted RBP19.56■□□□□ 0.72
CCDC171-206ENST00000474193 SPHK2Q9NRA0 654 aa19.56■□□□□ 0.72
CCDC171-206ENST00000474193 ZNF510Q9Y2H8 683 aa19.56■□□□□ 0.72
CCDC171-206ENST00000474193 LGALS16A8MUM7 142 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms