RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 SACM1LQ9NTJ5 587 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 AFF4Q9UHB7 1163 aaKnown RBP6.35□□□□□ -1.39
RTF1-203ENST00000473214 CPA4Q9UI42 421 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 CBLCQ9ULV8 474 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 NOSIPQ9Y314 301 aaKnown RBP6.35□□□□□ -1.39
RTF1-203ENST00000473214 CCL27Q9Y4X3 112 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 CSADQ9Y600 493 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 SESN1Q9Y6P5 492 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 SLIT2O94813 1529 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 ERBINQ96RT1 1412 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 ATP8B3O60423 1300 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 RNF103-CHMP3A0A140T963 221 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 VGLL3A8MV65 326 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 GPR89AB7ZAQ6 455 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 RNF103O00237 685 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 MEFVO15553 781 aaPredicted RBP6.34□□□□□ -1.39
RTF1-203ENST00000473214 PHF2O75151 1096 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 PEX11AO75192 247 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 CAMTA2O94983 1202 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 OLFM2O95897 454 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 LPLP06858 475 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 HMOX1P09601 288 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 GPR89BP0CG08 455 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 FUT4P22083 530 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 KCNA5P22460 613 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 PSMA4P25789 261 aaKnown RBP6.34□□□□□ -1.39
RTF1-203ENST00000473214 PTX3P26022 381 aaPredicted RBP6.34□□□□□ -1.39
RTF1-203ENST00000473214 GDI1P31150 447 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 GRK5P34947 590 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 PAFAH1B1P43034 410 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 POLE2P56282 527 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 ZNF445P59923 1031 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 PSMC6P62333 389 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 COG7P83436 770 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 KRT17Q04695 432 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.34□□□□□ -1.39
RTF1-203ENST00000473214 DUSP4Q13115 394 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 IL10RAQ13651 578 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 KIZQ2M2Z5 673 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 CCDC40Q4G0X9 1142 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 CCDC122Q5T0U0 273 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 DEPDC1Q5TB30 811 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 ESRP1Q6NXG1 681 aaKnown RBP6.34□□□□□ -1.39
RTF1-203ENST00000473214 SYNE3Q6ZMZ3 975 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 H1FNTQ75WM6 255 aaPredicted RBP6.34□□□□□ -1.39
RTF1-203ENST00000473214 RAB11FIP2Q7L804 512 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 ADCK1Q86TW2 530 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 C12orf40Q86WS4 652 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 GATAD2AQ86YP4 633 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 MCATQ8IVS2 390 aaKnown RBP6.34□□□□□ -1.39
RTF1-203ENST00000473214 SCN4BQ8IWT1 228 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 TUSC5Q8IXB3 177 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 MYOCDQ8IZQ8 938 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 USP38Q8NB14 1042 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 PCSK9Q8NBP7 692 aaKnown RBP6.34□□□□□ -1.39
RTF1-203ENST00000473214 OR6J1Q8NGC5 347 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 RAX2Q96IS3 184 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 NOL10Q9BSC4 688 aaKnown RBP6.34□□□□□ -1.39
RTF1-203ENST00000473214 MAK16Q9BXY0 300 aaKnown RBP6.34□□□□□ -1.39
RTF1-203ENST00000473214 ACPTQ9BZG2 426 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 ANKRD2Q9GZV1 360 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 ABHD16BQ9H3Z7 469 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 ATP13A1Q9HD20 1204 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 SNX15Q9NRS6 342 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 ZBTB40Q9NUA8 1239 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 TJP2Q9UDY2 1190 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 MTUS1Q9ULD2 1270 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 LYVE1Q9Y5Y7 322 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 POMT1Q9Y6A1 747 aa6.34□□□□□ -1.39
RTF1-203ENST00000473214 PXDNQ92626 1479 aa6.34□□□□□ -1.4
RTF1-203ENST00000473214 ABCC5O15440 1437 aa6.33□□□□□ -1.4
RTF1-203ENST00000473214 LRRC72A6NJI9 287 aa6.33□□□□□ -1.4
RTF1-203ENST00000473214 ACTL6BO94805 426 aa6.33□□□□□ -1.4
RTF1-203ENST00000473214 TRIM16O95361 564 aa6.33□□□□□ -1.4
RTF1-203ENST00000473214 ANXA2P07355 339 aaKnown RBP6.33□□□□□ -1.4
RTF1-203ENST00000473214 KRT15P19012 456 aa6.33□□□□□ -1.4
RTF1-203ENST00000473214 TPP2P29144 1249 aaPredicted RBP6.33□□□□□ -1.4
RTF1-203ENST00000473214 SOX6P35712 828 aa6.33□□□□□ -1.4
RTF1-203ENST00000473214 GNL1P36915 607 aaPredicted RBP6.33□□□□□ -1.4
RTF1-203ENST00000473214 ETV1P50549 477 aa6.33□□□□□ -1.4
RTF1-203ENST00000473214 RARSP54136 660 aaKnown RBP6.33□□□□□ -1.4
RTF1-203ENST00000473214 PNLIPRP1P54315 467 aa6.33□□□□□ -1.4
RTF1-203ENST00000473214 STARD6P59095 220 aa6.33□□□□□ -1.4
RTF1-203ENST00000473214 RPS3AP61247 264 aaKnown RBP6.33□□□□□ -1.4
RTF1-203ENST00000473214 CETN1Q12798 172 aa6.33□□□□□ -1.4
RTF1-203ENST00000473214 SNX1Q13596 522 aa6.33□□□□□ -1.4
RTF1-203ENST00000473214 MXD4Q14582 209 aaPredicted RBP6.33□□□□□ -1.4
RTF1-203ENST00000473214 TBCCQ15814 346 aa6.33□□□□□ -1.4
RTF1-203ENST00000473214 BAK1Q16611 211 aa6.33□□□□□ -1.4
RTF1-203ENST00000473214 SUPT20HL1Q3ZLR7 823 aa6.33□□□□□ -1.4
RTF1-203ENST00000473214 FAM69AQ5T7M9 428 aa6.33□□□□□ -1.4
RTF1-203ENST00000473214 AP1ARQ63HQ0 302 aa6.33□□□□□ -1.4
RTF1-203ENST00000473214 TPGS2Q68CL5 300 aa6.33□□□□□ -1.4
RTF1-203ENST00000473214 TMEM154Q6P9G4 183 aa6.33□□□□□ -1.4
RTF1-203ENST00000473214 KLHDC10Q6PID8 442 aa6.33□□□□□ -1.4
RTF1-203ENST00000473214 UBE3BQ7Z3V4 1068 aa6.33□□□□□ -1.4
RTF1-203ENST00000473214 TMC6Q7Z403 805 aa6.33□□□□□ -1.4
RTF1-203ENST00000473214 KSR1Q8IVT5 923 aa6.33□□□□□ -1.4
RTF1-203ENST00000473214 HDDC3Q8N4P3 179 aa6.33□□□□□ -1.4
RTF1-203ENST00000473214 FIBCD1Q8N539 461 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms