RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 LMAN1LQ9HAT1 526 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 TMEM8AQ9HCN3 771 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 PTPRHQ9HD43 1115 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 SIX2Q9NPC8 291 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 NLRC4Q9NPP4 1024 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 PLCB1Q9NQ66 1216 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 ZDHHC3Q9NYG2 299 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 CPSF3Q9UKF6 684 aaKnown RBP6.8□□□□□ -1.32
HDAC1-205ENST00000472928 CAPN11Q9UMQ6 739 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 POLIQ9UNA4 740 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 WASF3Q9UPY6 502 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 GIT1Q9Y2X7 761 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 MRPS23Q9Y3D9 190 aaKnown RBP6.8□□□□□ -1.32
HDAC1-205ENST00000472928 MYO18BQ8IUG5 2567 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 NCANO14594 1321 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 SF3B1O75533 1304 aaKnown RBP eCLIP6.79□□□□□ -1.32
HDAC1-205ENST00000472928 SPTA1P02549 2419 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 LRRC53A6NM62 1247 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 SOBPA7XYQ1 873 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 ARNTLO00327 626 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 TADA2AO75478 443 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 NOL4O94818 638 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 KIF4AO95239 1232 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 IL18RAPO95256 599 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 RHOP08100 348 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 CLTAP09496 248 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 ZNF806P0C7X5 589 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 UCHL3P15374 230 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 TNNI1P19237 187 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 AKAP5P24588 427 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 AXLP30530 894 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 GTF2H1P32780 548 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 CNR2P34972 360 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 NCBP1Q09161 790 aaKnown RBP6.79□□□□□ -1.32
HDAC1-205ENST00000472928 GRIK3Q13003 919 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 RAB33AQ14088 237 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 PPP2R5DQ14738 602 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 PCBP1Q15365 356 aaKnown RBP eCLIP6.79□□□□□ -1.32
HDAC1-205ENST00000472928 CCDC6Q16204 474 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 KYAT1Q16773 422 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 AASDHQ4L235 1098 aaPredicted RBP6.79□□□□□ -1.32
HDAC1-205ENST00000472928 FAM78AQ5JUQ0 283 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 PRSS36Q5K4E3 855 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 KLHDC7AQ5VTJ3 777 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 FAM171A1Q5VUB5 890 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 TAF3Q5VWG9 929 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 TDRD10Q5VZ19 366 aaKnown RBP6.79□□□□□ -1.32
HDAC1-205ENST00000472928 KRT39Q6A163 491 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 HEATR6Q6AI08 1181 aaKnown RBP6.79□□□□□ -1.32
HDAC1-205ENST00000472928 IQCEQ6IPM2 695 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 SLC27A1Q6PCB7 646 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 GJB7Q6PEY0 223 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 Q6ZS52 159 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 RRAGAQ7L523 313 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 WDR49Q8IV35 697 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 EFCAB13Q8IY85 973 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 SPEM1Q8N4L4 309 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 OR8K1Q8NGG5 319 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 RNF217Q8TC41 542 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 TAS1R2Q8TE23 839 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 HASPINQ8TF76 798 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 FAM3CQ92520 227 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 TCEAL4Q96EI5 215 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 DMRTB1Q96MA1 342 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 SPAG5Q96R06 1193 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 CCDC94Q9BW85 323 aaPredicted RBP6.79□□□□□ -1.32
HDAC1-205ENST00000472928 APOL6Q9BWW8 343 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 NAA15Q9BXJ9 866 aaKnown RBP6.79□□□□□ -1.32
HDAC1-205ENST00000472928 TRIM6Q9C030 488 aaPredicted RBP6.79□□□□□ -1.32
HDAC1-205ENST00000472928 MTMR12Q9C0I1 747 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 BRD9Q9H8M2 597 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 RPF1Q9H9Y2 349 aaKnown RBP6.79□□□□□ -1.32
HDAC1-205ENST00000472928 AVENQ9NQS1 362 aaPredicted RBP6.79□□□□□ -1.32
HDAC1-205ENST00000472928 RBM12Q9NTZ6 932 aaKnown RBP6.79□□□□□ -1.32
HDAC1-205ENST00000472928 ZNHIT6Q9NWK9 470 aaKnown RBP6.79□□□□□ -1.32
HDAC1-205ENST00000472928 APEX2Q9UBZ4 518 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 AJAP1Q9UKB5 411 aaPredicted RBP6.79□□□□□ -1.32
HDAC1-205ENST00000472928 PIAS3Q9Y6X2 628 aa6.79□□□□□ -1.32
HDAC1-205ENST00000472928 CELSR3Q9NYQ7 3312 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 A0A1B0GUA9 196 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 CASTOR2A6NHX0 329 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 SRRM3A6NNA2 597 aaPredicted RBP6.78□□□□□ -1.32
HDAC1-205ENST00000472928 GIPC1O14908 333 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 PMM2O15305 246 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 ARHGAP6O43182 974 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 PHACTR2O75167 634 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 EPN2O95208 641 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 TOP3BO95985 862 aaKnown RBP6.78□□□□□ -1.32
HDAC1-205ENST00000472928 HLA-DRAP01903 254 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 TNNC2P02585 160 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 NFICP08651 508 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 TMEM191BP0C7N4 346 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 BMP2P12643 396 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 SPINK2P20155 84 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 IGFBP6P24592 240 aaPredicted RBP6.78□□□□□ -1.32
HDAC1-205ENST00000472928 MZF1P28698 734 aaPredicted RBP6.78□□□□□ -1.32
HDAC1-205ENST00000472928 HOXA6P31267 233 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 OR1D2P34982 312 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 CCR2P41597 374 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 RAP1GAPP47736 663 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms