RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 ARCQ7LC44 396 aa7.97□□□□□ -1.13
CCDC171-205ENST00000472806 TADA2BQ86TJ2 420 aa7.97□□□□□ -1.13
CCDC171-205ENST00000472806 TMEM110Q86TL2 294 aa7.97□□□□□ -1.13
CCDC171-205ENST00000472806 EXOC3L1Q86VI1 746 aa7.97□□□□□ -1.13
CCDC171-205ENST00000472806 CCDC13Q8IYE1 715 aa7.97□□□□□ -1.13
CCDC171-205ENST00000472806 C10orf67Q8IYJ2 551 aa7.97□□□□□ -1.13
CCDC171-205ENST00000472806 ATP11CQ8NB49 1132 aa7.97□□□□□ -1.13
CCDC171-205ENST00000472806 JOSD2Q8TAC2 188 aa7.97□□□□□ -1.13
CCDC171-205ENST00000472806 UHMK1Q8TAS1 419 aaKnown RBP7.97□□□□□ -1.13
CCDC171-205ENST00000472806 ACTL9Q8TC94 416 aa7.97□□□□□ -1.13
CCDC171-205ENST00000472806 ATXN2LQ8WWM7 1075 aaKnown RBP7.97□□□□□ -1.13
CCDC171-205ENST00000472806 RXFP2Q8WXD0 754 aa7.97□□□□□ -1.13
CCDC171-205ENST00000472806 SOCS4Q8WXH5 440 aa7.97□□□□□ -1.13
CCDC171-205ENST00000472806 GRAMD1AQ96CP6 724 aa7.97□□□□□ -1.13
CCDC171-205ENST00000472806 SGSM3Q96HU1 749 aa7.97□□□□□ -1.13
CCDC171-205ENST00000472806 SEC16BQ96JE7 1060 aa7.97□□□□□ -1.13
CCDC171-205ENST00000472806 TNIP3Q96KP6 325 aa7.97□□□□□ -1.13
CCDC171-205ENST00000472806 TWNKQ96RR1 684 aa7.97□□□□□ -1.13
CCDC171-205ENST00000472806 PPP1R16BQ96T49 567 aa7.97□□□□□ -1.13
CCDC171-205ENST00000472806 DDX23Q9BUQ8 820 aaKnown RBP7.97□□□□□ -1.13
CCDC171-205ENST00000472806 SNX25Q9H3E2 840 aa7.97□□□□□ -1.13
CCDC171-205ENST00000472806 SETD4Q9NVD3 440 aa7.97□□□□□ -1.13
CCDC171-205ENST00000472806 SNTG2Q9NY99 539 aa7.97□□□□□ -1.13
CCDC171-205ENST00000472806 CYTH4Q9UIA0 394 aa7.97□□□□□ -1.13
CCDC171-205ENST00000472806 SMG5Q9UPR3 1016 aaKnown RBP7.97□□□□□ -1.13
CCDC171-205ENST00000472806 SNX9Q9Y5X1 595 aa7.97□□□□□ -1.13
CCDC171-205ENST00000472806 C17orf102A2RUQ5 167 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 C2CD4BA6NLJ0 364 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 A8MXQ7 604 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 DCDC2CA8MYV0 355 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 E5RJQ4 531 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 M0QZ92 97 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 APOL1O14791 398 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 MDM4O15151 490 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 TP73O15350 636 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 GPR32O75388 356 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 CPP00450 1065 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 CELA2BP08218 269 aaPredicted RBP7.96□□□□□ -1.14
CCDC171-205ENST00000472806 VIMP08670 466 aaKnown RBP7.96□□□□□ -1.14
CCDC171-205ENST00000472806 GHRP10912 638 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 BRAFP15056 766 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 KCNE1P15382 129 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 PECAM1P16284 738 aaPredicted RBP7.96□□□□□ -1.14
CCDC171-205ENST00000472806 DRD4P21917 467 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 RGS2P41220 211 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 PTPN9P43378 593 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 SLCO1A2P46721 670 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 CTCFP49711 727 aaPredicted RBP7.96□□□□□ -1.14
CCDC171-205ENST00000472806 TAF6P49848 677 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 CRYBB1P53674 252 aaPredicted RBP7.96□□□□□ -1.14
CCDC171-205ENST00000472806 SLC18A1P54219 525 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 CDH6P55285 790 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 DYNLT1P63172 113 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 IFI35P80217 286 aaPredicted RBP7.96□□□□□ -1.14
CCDC171-205ENST00000472806 IL9RQ01113 521 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 RNASELQ05823 741 aaKnown RBP7.96□□□□□ -1.14
CCDC171-205ENST00000472806 BST2Q10589 180 aaKnown RBP7.96□□□□□ -1.14
CCDC171-205ENST00000472806 ZBTB6Q15916 424 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 LONRF1Q17RB8 773 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 KIZQ2M2Z5 673 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 FBXO47Q5MNV8 452 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 TMEM63BQ5T3F8 832 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 RNF187Q5TA31 235 aaPredicted RBP7.96□□□□□ -1.14
CCDC171-205ENST00000472806 C9orf57Q5W0N0 161 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 MAP1SQ66K74 1059 aaPredicted RBP7.96□□□□□ -1.14
CCDC171-205ENST00000472806 OLFML2BQ68BL8 750 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 TAF2Q6P1X5 1199 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 DARS2Q6PI48 645 aaKnown RBP7.96□□□□□ -1.14
CCDC171-205ENST00000472806 FAM183BPQ6ZVS7 135 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 BZW1Q7L1Q6 419 aaKnown RBP7.96□□□□□ -1.14
CCDC171-205ENST00000472806 RSPH3Q86UC2 560 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 TLK2Q86UE8 772 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 CDKL3Q8IVW4 592 aaPredicted RBP7.96□□□□□ -1.14
CCDC171-205ENST00000472806 PDIK1LQ8N165 341 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 OR6B3Q8NGW1 331 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 NPLOC4Q8TAT6 608 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 UBA3Q8TBC4 463 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 PYROXD1Q8WU10 500 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 HSPH1Q92598 858 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 ZBTB10Q96DT7 871 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 HSFY1Q96LI6 401 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 FERMT1Q9BQL6 677 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 ZNF670Q9BS34 389 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 TMEM121Q9BTD3 319 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 CALN1Q9BXU9 219 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 FAM49AQ9H0Q0 323 aaPredicted RBP7.96□□□□□ -1.14
CCDC171-205ENST00000472806 RABEP2Q9H5N1 569 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 VPS37BQ9H9H4 285 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 KCNK9Q9NPC2 374 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 GDAP2Q9NXN4 497 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 PAK5Q9P286 719 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 PCSK1NQ9UHG2 260 aa7.96□□□□□ -1.14
CCDC171-205ENST00000472806 DDX20Q9UHI6 824 aaKnown RBP7.96□□□□□ -1.14
CCDC171-205ENST00000472806 GNEQ9Y223 722 aaKnown RBP7.96□□□□□ -1.14
CCDC171-205ENST00000472806 EVPLQ92817 2033 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 TMEM120BA0PK00 339 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 H0YHG0 523 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 H7C0C1 242 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 HAS3O00219 553 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 CHADO15335 359 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms