RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 CDH9Q9ULB4 789 aa9.69□□□□□ -0.86
SMC4-213ENST00000472282 CCL26Q9Y258 94 aa9.69□□□□□ -0.86
SMC4-213ENST00000472282 ZFHX2Q9C0A1 2572 aaPredicted RBP9.68□□□□□ -0.86
SMC4-213ENST00000472282 LGALS16A8MUM7 142 aa9.68□□□□□ -0.86
SMC4-213ENST00000472282 GOLGA6L19H0YKK7 550 aa9.68□□□□□ -0.86
SMC4-213ENST00000472282 CHADO15335 359 aa9.68□□□□□ -0.86
SMC4-213ENST00000472282 CILPO75339 1184 aa9.68□□□□□ -0.86
SMC4-213ENST00000472282 AP1G2O75843 785 aa9.68□□□□□ -0.86
SMC4-213ENST00000472282 LMNAP02545 664 aaKnown RBP9.68□□□□□ -0.86
SMC4-213ENST00000472282 FAM163BP0C2L3 166 aa9.68□□□□□ -0.86
SMC4-213ENST00000472282 CHRNB1P11230 501 aa9.68□□□□□ -0.86
SMC4-213ENST00000472282 TDGF1P13385 188 aa9.68□□□□□ -0.86
SMC4-213ENST00000472282 TBXAS1P24557 533 aaPredicted RBP9.68□□□□□ -0.86
SMC4-213ENST00000472282 PON1P27169 355 aa9.68□□□□□ -0.86
SMC4-213ENST00000472282 RPS9P46781 194 aaKnown RBP9.68□□□□□ -0.86
SMC4-213ENST00000472282 NDST1P52848 882 aa9.68□□□□□ -0.86
SMC4-213ENST00000472282 TPM4P67936 248 aa9.68□□□□□ -0.86
SMC4-213ENST00000472282 RELBQ01201 579 aa9.68□□□□□ -0.86
SMC4-213ENST00000472282 APBA1Q02410 837 aa9.68□□□□□ -0.86
SMC4-213ENST00000472282 INCA1Q0VD86 236 aa9.68□□□□□ -0.86
SMC4-213ENST00000472282 VEPH1Q14D04 833 aa9.68□□□□□ -0.86
SMC4-213ENST00000472282 MDH1BQ5I0G3 518 aa9.68□□□□□ -0.86
SMC4-213ENST00000472282 TXNDC8Q6A555 127 aa9.68□□□□□ -0.86
SMC4-213ENST00000472282 GJB7Q6PEY0 223 aa9.68□□□□□ -0.86
SMC4-213ENST00000472282 Q6ZS52 159 aa9.68□□□□□ -0.86
SMC4-213ENST00000472282 RRAGAQ7L523 313 aa9.68□□□□□ -0.86
SMC4-213ENST00000472282 APTXQ7Z2E3 356 aaKnown RBP9.68□□□□□ -0.86
SMC4-213ENST00000472282 YAF2Q8IY57 180 aa9.68□□□□□ -0.86
SMC4-213ENST00000472282 MAB21L3Q8N8X9 362 aa9.68□□□□□ -0.86
SMC4-213ENST00000472282 RNF214Q8ND24 703 aa9.68□□□□□ -0.86
SMC4-213ENST00000472282 ADAM32Q8TC27 787 aa9.68□□□□□ -0.86
SMC4-213ENST00000472282 BPIFB1Q8TDL5 484 aa9.68□□□□□ -0.86
SMC4-213ENST00000472282 NELL1Q92832 810 aa9.68□□□□□ -0.86
SMC4-213ENST00000472282 MYLPFQ96A32 169 aa9.68□□□□□ -0.86
SMC4-213ENST00000472282 CHFRQ96EP1 664 aa9.68□□□□□ -0.86
SMC4-213ENST00000472282 FAXDC2Q96IV6 333 aa9.68□□□□□ -0.86
SMC4-213ENST00000472282 TWNKQ96RR1 684 aa9.68□□□□□ -0.86
SMC4-213ENST00000472282 CHRDQ9H2X0 955 aa9.68□□□□□ -0.86
SMC4-213ENST00000472282 LMAN1LQ9HAT1 526 aa9.68□□□□□ -0.86
SMC4-213ENST00000472282 PRMT8Q9NR22 394 aaPredicted RBP9.68□□□□□ -0.86
SMC4-213ENST00000472282 CISHQ9NSE2 258 aa9.68□□□□□ -0.86
SMC4-213ENST00000472282 C2orf42Q9NWW7 574 aa9.68□□□□□ -0.86
SMC4-213ENST00000472282 FBXO4Q9UKT5 387 aa9.68□□□□□ -0.86
SMC4-213ENST00000472282 MAGED2Q9UNF1 606 aaPredicted RBP9.68□□□□□ -0.86
SMC4-213ENST00000472282 DMDP11532 3685 aa9.68□□□□□ -0.86
SMC4-213ENST00000472282 SLC35F4A4IF30 521 aa9.67□□□□□ -0.86
SMC4-213ENST00000472282 OTOL1A6NHN0 477 aaPredicted RBP9.67□□□□□ -0.86
SMC4-213ENST00000472282 SPECC1L-ADORA2AF8WAN1 911 aa9.67□□□□□ -0.86
SMC4-213ENST00000472282 MAN2B1O00754 1011 aa9.67□□□□□ -0.86
SMC4-213ENST00000472282 LILRB5O75023 590 aa9.67□□□□□ -0.86
SMC4-213ENST00000472282 PTPN1P18031 435 aaKnown RBP9.67□□□□□ -0.86
SMC4-213ENST00000472282 CDC25CP30307 473 aa9.67□□□□□ -0.86
SMC4-213ENST00000472282 MAGEA9P43362 315 aa9.67□□□□□ -0.86
SMC4-213ENST00000472282 YWHAEP62258 255 aaKnown RBP9.67□□□□□ -0.86
SMC4-213ENST00000472282 SATB1Q01826 763 aa9.67□□□□□ -0.86
SMC4-213ENST00000472282 GCNT1Q02742 428 aa9.67□□□□□ -0.86
SMC4-213ENST00000472282 DMWDQ09019 674 aa9.67□□□□□ -0.86
SMC4-213ENST00000472282 SMARCB1Q12824 385 aa9.67□□□□□ -0.86
SMC4-213ENST00000472282 NFE2Q16621 373 aaPredicted RBP9.67□□□□□ -0.86
SMC4-213ENST00000472282 ZNF528Q3MIS6 628 aa9.67□□□□□ -0.86
SMC4-213ENST00000472282 ZNF394Q53GI3 561 aa9.67□□□□□ -0.86
SMC4-213ENST00000472282 ARHGAP15Q53QZ3 475 aa9.67□□□□□ -0.86
SMC4-213ENST00000472282 FKBP15Q5T1M5 1219 aa9.67□□□□□ -0.86
SMC4-213ENST00000472282 TRIM68Q6AZZ1 485 aa9.67□□□□□ -0.86
SMC4-213ENST00000472282 FAM171BQ6P995 826 aa9.67□□□□□ -0.86
SMC4-213ENST00000472282 ACOT1Q86TX2 421 aa9.67□□□□□ -0.86
SMC4-213ENST00000472282 UNC93AQ86WB7 457 aa9.67□□□□□ -0.86
SMC4-213ENST00000472282 SPATA2LQ8IUW3 424 aaPredicted RBP9.67□□□□□ -0.86
SMC4-213ENST00000472282 CMTM8Q8IZV2 173 aa9.67□□□□□ -0.86
SMC4-213ENST00000472282 GPR161Q8N6U8 529 aaKnown RBP9.67□□□□□ -0.86
SMC4-213ENST00000472282 UBR7Q8N806 425 aa9.67□□□□□ -0.86
SMC4-213ENST00000472282 ZBTB44Q8NCP5 570 aa9.67□□□□□ -0.86
SMC4-213ENST00000472282 B3GALNT2Q8NCR0 500 aa9.67□□□□□ -0.86
SMC4-213ENST00000472282 CSGALNACT1Q8TDX6 532 aa9.67□□□□□ -0.86
SMC4-213ENST00000472282 WHAMMQ8TF30 809 aa9.67□□□□□ -0.86
SMC4-213ENST00000472282 USP13Q92995 863 aaPredicted RBP9.67□□□□□ -0.86
SMC4-213ENST00000472282 E2F7Q96AV8 911 aa9.67□□□□□ -0.86
SMC4-213ENST00000472282 TNIP3Q96KP6 325 aa9.67□□□□□ -0.86
SMC4-213ENST00000472282 KREMEN1Q96MU8 473 aa9.67□□□□□ -0.86
SMC4-213ENST00000472282 SLC22A12Q96S37 553 aa9.67□□□□□ -0.86
SMC4-213ENST00000472282 LSM14BQ9BX40 385 aaKnown RBP9.67□□□□□ -0.86
SMC4-213ENST00000472282 NT5C1AQ9BXI3 368 aa9.67□□□□□ -0.86
SMC4-213ENST00000472282 ELOVL4Q9GZR5 314 aa9.67□□□□□ -0.86
SMC4-213ENST00000472282 POLMQ9NP87 494 aaPredicted RBP9.67□□□□□ -0.86
SMC4-213ENST00000472282 SIX2Q9NPC8 291 aa9.67□□□□□ -0.86
SMC4-213ENST00000472282 HPS4Q9NQG7 708 aa9.67□□□□□ -0.86
SMC4-213ENST00000472282 APEX2Q9UBZ4 518 aa9.67□□□□□ -0.86
SMC4-213ENST00000472282 MRPS17Q9Y2R5 130 aaKnown RBP9.67□□□□□ -0.86
SMC4-213ENST00000472282 NCAM2O15394 837 aa9.66□□□□□ -0.86
SMC4-213ENST00000472282 NOL4O94818 638 aa9.66□□□□□ -0.86
SMC4-213ENST00000472282 FGF19O95750 216 aa9.66□□□□□ -0.86
SMC4-213ENST00000472282 SERPINC1P01008 464 aa9.66□□□□□ -0.86
SMC4-213ENST00000472282 CCDC130P13994 396 aa9.66□□□□□ -0.86
SMC4-213ENST00000472282 ACO1P21399 889 aaKnown RBP9.66□□□□□ -0.86
SMC4-213ENST00000472282 WEE1P30291 646 aa9.66□□□□□ -0.86
SMC4-213ENST00000472282 KLK7P49862 253 aa9.66□□□□□ -0.86
SMC4-213ENST00000472282 KPNA1P52294 538 aaPredicted RBP9.66□□□□□ -0.86
SMC4-213ENST00000472282 CACNA2D1P54289 1103 aa9.66□□□□□ -0.86
SMC4-213ENST00000472282 CYP27A1Q02318 531 aa9.66□□□□□ -0.86
SMC4-213ENST00000472282 UBXN1Q04323 297 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms