RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 RPS16P62249 146 aaKnown RBP5.65□□□□□ -1.5
CD46-213ENST00000471987 RPS13P62277 151 aaKnown RBP5.65□□□□□ -1.5
CD46-213ENST00000471987 CFHR1Q03591 330 aa5.65□□□□□ -1.5
CD46-213ENST00000471987 SRSF1Q07955 248 aaKnown RBP eCLIP5.65□□□□□ -1.53e-6■□□□□ 8.3
CD46-213ENST00000471987 MFSD13AQ14CX5 517 aa5.65□□□□□ -1.5
CD46-213ENST00000471987 C3orf38Q5JPI3 329 aa5.65□□□□□ -1.5
CD46-213ENST00000471987 FAM102BQ5T8I3 360 aa5.65□□□□□ -1.5
CD46-213ENST00000471987 ANKRD13BQ86YJ7 626 aa5.65□□□□□ -1.5
CD46-213ENST00000471987 ZDHHC17Q8IUH5 632 aa5.65□□□□□ -1.5
CD46-213ENST00000471987 HIC2Q96JB3 615 aa5.65□□□□□ -1.5
CD46-213ENST00000471987 VPS50Q96JG6 964 aa5.65□□□□□ -1.5
CD46-213ENST00000471987 LRRC27Q9C0I9 530 aa5.65□□□□□ -1.5
CD46-213ENST00000471987 ZCWPW1Q9H0M4 648 aa5.65□□□□□ -1.5
CD46-213ENST00000471987 FOXP1Q9H334 677 aaPredicted RBP5.65□□□□□ -1.5
CD46-213ENST00000471987 TMEM184CQ9NVA4 438 aa5.65□□□□□ -1.5
CD46-213ENST00000471987 STEAP1Q9UHE8 339 aa5.65□□□□□ -1.5
CD46-213ENST00000471987 OGDHLQ9ULD0 1010 aa5.65□□□□□ -1.5
CD46-213ENST00000471987 RIMKLBQ9ULI2 386 aa5.65□□□□□ -1.5
CD46-213ENST00000471987 NOB1Q9ULX3 412 aaKnown RBP5.65□□□□□ -1.5
CD46-213ENST00000471987 FAM90A10PA6NDY2 464 aa5.64□□□□□ -1.51
CD46-213ENST00000471987 AGPSO00116 658 aa5.64□□□□□ -1.51
CD46-213ENST00000471987 SNX2O60749 519 aa5.64□□□□□ -1.51
CD46-213ENST00000471987 THBS4P35443 961 aa5.64□□□□□ -1.51
CD46-213ENST00000471987 LINC00205P59089 165 aa5.64□□□□□ -1.51
CD46-213ENST00000471987 FMO1Q01740 532 aa5.64□□□□□ -1.51
CD46-213ENST00000471987 ARHGAP29Q52LW3 1261 aa5.64□□□□□ -1.51
CD46-213ENST00000471987 MZT2AQ6P582 158 aa5.64□□□□□ -1.51
CD46-213ENST00000471987 IPCEF1Q8WWN9 437 aaPredicted RBP5.64□□□□□ -1.51
CD46-213ENST00000471987 LRTOMTQ8WZ04 291 aa5.64□□□□□ -1.51
CD46-213ENST00000471987 EDC3Q96F86 508 aaKnown RBP5.64□□□□□ -1.51
CD46-213ENST00000471987 POT1Q9NUX5 634 aa5.64□□□□□ -1.51
CD46-213ENST00000471987 COL20A1Q9P218 1284 aa5.64□□□□□ -1.51
CD46-213ENST00000471987 DKK4Q9UBT3 224 aa5.64□□□□□ -1.51
CD46-213ENST00000471987 MID2Q9UJV3 735 aa5.64□□□□□ -1.51
CD46-213ENST00000471987 THRAP3Q9Y2W1 955 aaKnown RBP5.64□□□□□ -1.51
CD46-213ENST00000471987 CNOT3O75175 753 aaKnown RBP5.63□□□□□ -1.51
CD46-213ENST00000471987 OAZ2O95190 189 aa5.63□□□□□ -1.51
CD46-213ENST00000471987 CTSAP10619 480 aa5.63□□□□□ -1.51
CD46-213ENST00000471987 ADRA1DP25100 572 aa5.63□□□□□ -1.51
CD46-213ENST00000471987 TXNL4AP83876 142 aaKnown RBP5.63□□□□□ -1.51
CD46-213ENST00000471987 HSF1Q00613 529 aa5.63□□□□□ -1.51
CD46-213ENST00000471987 POLD3Q15054 466 aaPredicted RBP5.63□□□□□ -1.51
CD46-213ENST00000471987 CRELD2Q6UXH1 353 aaPredicted RBP5.63□□□□□ -1.51
CD46-213ENST00000471987 UBE2Q1Q7Z7E8 422 aa5.63□□□□□ -1.51
CD46-213ENST00000471987 PIP4P1Q86T03 277 aa5.63□□□□□ -1.51
CD46-213ENST00000471987 METTL25Q8N6Q8 603 aa5.63□□□□□ -1.51
CD46-213ENST00000471987 HIST1H2AAQ96QV6 131 aa5.63□□□□□ -1.51
CD46-213ENST00000471987 CHST8Q9H2A9 424 aa5.63□□□□□ -1.51
CD46-213ENST00000471987 ZNF287Q9HBT7 754 aa5.63□□□□□ -1.51
CD46-213ENST00000471987 DNAJB11Q9UBS4 358 aa5.63□□□□□ -1.51
CD46-213ENST00000471987 CBSLP0DN79 551 aa5.62□□□□□ -1.51
CD46-213ENST00000471987 CYP19A1P11511 503 aaPredicted RBP5.62□□□□□ -1.51
CD46-213ENST00000471987 IL1R1P14778 569 aa5.62□□□□□ -1.51
CD46-213ENST00000471987 TACR3P29371 465 aa5.62□□□□□ -1.51
CD46-213ENST00000471987 CCKBRP32239 447 aa5.62□□□□□ -1.51
CD46-213ENST00000471987 CBSP35520 551 aa5.62□□□□□ -1.51
CD46-213ENST00000471987 EIF4A1P60842 406 aaKnown RBP5.62□□□□□ -1.51
CD46-213ENST00000471987 DEUP1Q05D60 604 aa5.62□□□□□ -1.51
CD46-213ENST00000471987 SLC14A1Q13336 389 aa5.62□□□□□ -1.51
CD46-213ENST00000471987 PFKFB3Q16875 520 aaPredicted RBP5.62□□□□□ -1.51
CD46-213ENST00000471987 SLC9C1Q4G0N8 1177 aa5.62□□□□□ -1.51
CD46-213ENST00000471987 RNF220Q5VTB9 566 aa5.62□□□□□ -1.51
CD46-213ENST00000471987 NXNQ6DKJ4 435 aa5.62□□□□□ -1.51
CD46-213ENST00000471987 USP49Q70CQ1 688 aa5.62□□□□□ -1.51
CD46-213ENST00000471987 TCEAL8Q8IYN2 117 aa5.62□□□□□ -1.51
CD46-213ENST00000471987 FAM177A1Q8N128 213 aaPredicted RBP5.62□□□□□ -1.51
CD46-213ENST00000471987 C11orf44Q8N8P7 122 aa5.62□□□□□ -1.51
CD46-213ENST00000471987 FAM71DQ8N9W8 422 aa5.62□□□□□ -1.51
CD46-213ENST00000471987 APIPQ96GX9 242 aa5.62□□□□□ -1.51
CD46-213ENST00000471987 KAZALD1Q96I82 304 aa5.62□□□□□ -1.51
CD46-213ENST00000471987 USP29Q9HBJ7 922 aa5.62□□□□□ -1.51
CD46-213ENST00000471987 HEY2Q9UBP5 337 aa5.62□□□□□ -1.51
CD46-213ENST00000471987 ITGB1BP2Q9UKP3 347 aa5.62□□□□□ -1.51
CD46-213ENST00000471987 ASAP1Q9ULH1 1129 aa5.62□□□□□ -1.51
CD46-213ENST00000471987 FZD4Q9ULV1 537 aa5.62□□□□□ -1.51
CD46-213ENST00000471987 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.61□□□□□ -1.51
CD46-213ENST00000471987 FYB1O15117 783 aa5.61□□□□□ -1.51
CD46-213ENST00000471987 MAP4K4O95819 1239 aaPredicted RBP5.61□□□□□ -1.51
CD46-213ENST00000471987 SCGB1D2O95969 90 aa5.61□□□□□ -1.51
CD46-213ENST00000471987 MYF5P13349 255 aa5.61□□□□□ -1.51
CD46-213ENST00000471987 BTF3P20290 206 aaKnown RBP5.61□□□□□ -1.51
CD46-213ENST00000471987 ME1P48163 572 aa5.61□□□□□ -1.51
CD46-213ENST00000471987 YPEL5P62699 121 aa5.61□□□□□ -1.51
CD46-213ENST00000471987 GPC5P78333 572 aa5.61□□□□□ -1.51
CD46-213ENST00000471987 CLCA4Q14CN2 919 aa5.61□□□□□ -1.51
CD46-213ENST00000471987 PLAG1Q6DJT9 500 aa5.61□□□□□ -1.51
CD46-213ENST00000471987 CLEC9AQ6UXN8 241 aa5.61□□□□□ -1.51
CD46-213ENST00000471987 SRGAP1Q7Z6B7 1085 aa5.61□□□□□ -1.51
CD46-213ENST00000471987 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.61□□□□□ -1.511e-6■■■□□ 18.3
CD46-213ENST00000471987 ARFGAP1Q8N6T3 406 aa5.61□□□□□ -1.51
CD46-213ENST00000471987 MAGEB6Q8N7X4 407 aa5.61□□□□□ -1.51
CD46-213ENST00000471987 ZDHHC12Q96GR4 267 aa5.61□□□□□ -1.51
CD46-213ENST00000471987 ZFYVE19Q96K21 471 aa5.61□□□□□ -1.51
CD46-213ENST00000471987 TRMOQ9BU70 441 aa5.61□□□□□ -1.51
CD46-213ENST00000471987 HS3ST3B1Q9Y662 390 aa5.61□□□□□ -1.51
CD46-213ENST00000471987 CD8B2A6NJW9 211 aa5.6□□□□□ -1.51
CD46-213ENST00000471987 A6NNZ2 444 aa5.6□□□□□ -1.51
CD46-213ENST00000471987 MGEA5O60502 916 aa5.6□□□□□ -1.51
CD46-213ENST00000471987 RBL1P28749 1068 aa5.6□□□□□ -1.51
CD46-213ENST00000471987 NTSR1P30989 418 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms