RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 GPS2Q13227 327 aa18.29■□□□□ 0.52
HSPG2-208ENST00000471322 CASP8Q14790 479 aa18.29■□□□□ 0.52
HSPG2-208ENST00000471322 ZFYVE27Q5T4F4 411 aa18.29■□□□□ 0.52
HSPG2-208ENST00000471322 ARCQ7LC44 396 aa18.29■□□□□ 0.52
HSPG2-208ENST00000471322 SLC2A14Q8TDB8 520 aa18.29■□□□□ 0.52
HSPG2-208ENST00000471322 IFT81Q8WYA0 676 aa18.29■□□□□ 0.52
HSPG2-208ENST00000471322 SEC14L1Q92503 715 aa18.29■□□□□ 0.52
HSPG2-208ENST00000471322 CAVIN3Q969G5 261 aa18.29■□□□□ 0.52
HSPG2-208ENST00000471322 DUSP16Q9BY84 665 aa18.29■□□□□ 0.52
HSPG2-208ENST00000471322 UBE2ZQ9H832 354 aaPredicted RBP18.29■□□□□ 0.52
HSPG2-208ENST00000471322 FAM114A2Q9NRY5 505 aa18.29■□□□□ 0.52
HSPG2-208ENST00000471322 DDX43Q9NXZ2 648 aaKnown RBP18.29■□□□□ 0.52
HSPG2-208ENST00000471322 TIMM13Q9Y5L4 95 aaPredicted RBP18.29■□□□□ 0.52
HSPG2-208ENST00000471322 C2CD4BA6NLJ0 364 aa18.28■□□□□ 0.52
HSPG2-208ENST00000471322 XPO1O14980 1071 aaKnown RBP18.28■□□□□ 0.52
HSPG2-208ENST00000471322 TEX28O15482 410 aa18.28■□□□□ 0.52
HSPG2-208ENST00000471322 TTI1O43156 1089 aa18.28■□□□□ 0.52
HSPG2-208ENST00000471322 CLASP2O75122 1294 aaKnown RBP18.28■□□□□ 0.52
HSPG2-208ENST00000471322 TBX10O75333 385 aa18.28■□□□□ 0.52
HSPG2-208ENST00000471322 KLRC2P26717 231 aa18.28■□□□□ 0.52
HSPG2-208ENST00000471322 GBP1P32455 592 aa18.28■□□□□ 0.52
HSPG2-208ENST00000471322 LTBRP36941 435 aa18.28■□□□□ 0.52
HSPG2-208ENST00000471322 COILP38432 576 aaPredicted RBP18.28■□□□□ 0.52
HSPG2-208ENST00000471322 TNNT3P45378 269 aaPredicted RBP18.28■□□□□ 0.52
HSPG2-208ENST00000471322 NDUFV1P49821 464 aa18.28■□□□□ 0.52
HSPG2-208ENST00000471322 DRG2P55039 364 aaKnown RBP18.28■□□□□ 0.52
HSPG2-208ENST00000471322 SIX1Q15475 284 aaPredicted RBP18.28■□□□□ 0.52
HSPG2-208ENST00000471322 CCDC137Q6PK04 289 aaKnown RBP18.28■□□□□ 0.52
HSPG2-208ENST00000471322 OLFML1Q6UWY5 402 aa18.28■□□□□ 0.52
HSPG2-208ENST00000471322 CASKIN2Q8WXE0 1202 aa18.28■□□□□ 0.52
HSPG2-208ENST00000471322 PABPC5Q96DU9 382 aaKnown RBP18.28■□□□□ 0.52
HSPG2-208ENST00000471322 CDH9Q9ULB4 789 aa18.28■□□□□ 0.52
HSPG2-208ENST00000471322 EFR3BQ9Y2G0 817 aa18.28■□□□□ 0.52
HSPG2-208ENST00000471322 HCFC2Q9Y5Z7 792 aa18.28■□□□□ 0.52
HSPG2-208ENST00000471322 IRAK3Q9Y616 596 aa18.28■□□□□ 0.52
HSPG2-208ENST00000471322 DPYSL4O14531 572 aa18.27■□□□□ 0.52
HSPG2-208ENST00000471322 TRAPPC3O43617 180 aa18.27■□□□□ 0.52
HSPG2-208ENST00000471322 LRCH4O75427 683 aa18.27■□□□□ 0.52
HSPG2-208ENST00000471322 TJP3O95049 919 aa18.27■□□□□ 0.52
HSPG2-208ENST00000471322 KRT1P04264 644 aa18.27■□□□□ 0.52
HSPG2-208ENST00000471322 CYP11A1P05108 521 aa18.27■□□□□ 0.52
HSPG2-208ENST00000471322 SPATA31D3P0C874 917 aa18.27■□□□□ 0.52
HSPG2-208ENST00000471322 MYBL2P10244 700 aa18.27■□□□□ 0.52
HSPG2-208ENST00000471322 RALAP11233 206 aa18.27■□□□□ 0.52
HSPG2-208ENST00000471322 PDGFRAP16234 1089 aa18.27■□□□□ 0.52
HSPG2-208ENST00000471322 CARSP49589 748 aaKnown RBP18.27■□□□□ 0.52
HSPG2-208ENST00000471322 ADAM15Q13444 863 aa18.27■□□□□ 0.52
HSPG2-208ENST00000471322 DAB2IPQ5VWQ8 1189 aa18.27■□□□□ 0.52
HSPG2-208ENST00000471322 SPATA31D4Q6ZUB0 917 aa18.27■□□□□ 0.52
HSPG2-208ENST00000471322 EMC1Q8N766 993 aa18.27■□□□□ 0.52
HSPG2-208ENST00000471322 EFHBQ8N7U6 833 aa18.27■□□□□ 0.52
HSPG2-208ENST00000471322 SLCO2A1Q92959 643 aa18.27■□□□□ 0.52
HSPG2-208ENST00000471322 KLHL5Q96PQ7 755 aa18.27■□□□□ 0.52
HSPG2-208ENST00000471322 SLITRK1Q96PX8 696 aa18.27■□□□□ 0.52
HSPG2-208ENST00000471322 HINFPQ9BQA5 517 aa18.27■□□□□ 0.52
HSPG2-208ENST00000471322 ERP44Q9BS26 406 aa18.27■□□□□ 0.52
HSPG2-208ENST00000471322 APOL5Q9BWW9 433 aa18.27■□□□□ 0.52
HSPG2-208ENST00000471322 EMILIN2Q9BXX0 1053 aa18.27■□□□□ 0.52
HSPG2-208ENST00000471322 THEGQ9P2T0 379 aa18.27■□□□□ 0.52
HSPG2-208ENST00000471322 STK39Q9UEW8 545 aa18.27■□□□□ 0.52
HSPG2-208ENST00000471322 VWA8A3KMH1 1905 aa18.27■□□□□ 0.51
HSPG2-208ENST00000471322 TCRBV7S2A1N4TA0A589 114 aa18.27■□□□□ 0.51
HSPG2-208ENST00000471322 ADAM12O43184 909 aa18.27■□□□□ 0.51
HSPG2-208ENST00000471322 HCRTO43612 131 aa18.27■□□□□ 0.51
HSPG2-208ENST00000471322 SASH3O75995 380 aa18.27■□□□□ 0.51
HSPG2-208ENST00000471322 EPCAMP16422 314 aa18.27■□□□□ 0.51
HSPG2-208ENST00000471322 FGFR3P22607 806 aa18.27■□□□□ 0.51
HSPG2-208ENST00000471322 GJC1P36383 396 aa18.27■□□□□ 0.51
HSPG2-208ENST00000471322 ELAVL2Q12926 359 aaKnown RBP18.27■□□□□ 0.51
HSPG2-208ENST00000471322 KLF1Q13351 362 aaPredicted RBP18.27■□□□□ 0.51
HSPG2-208ENST00000471322 PSMD5Q16401 504 aa18.27■□□□□ 0.51
HSPG2-208ENST00000471322 CTC1Q2NKJ3 1217 aa18.27■□□□□ 0.51
HSPG2-208ENST00000471322 SYDE1Q6ZW31 735 aaPredicted RBP18.27■□□□□ 0.51
HSPG2-208ENST00000471322 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.27■□□□□ 0.513e-6■□□□□ 9.9
HSPG2-208ENST00000471322 CCDC105Q8IYK2 499 aa18.27■□□□□ 0.51
HSPG2-208ENST00000471322 ZDHHC14Q8IZN3 488 aa18.27■□□□□ 0.51
HSPG2-208ENST00000471322 FUKQ8N0W3 1084 aa18.27■□□□□ 0.51
HSPG2-208ENST00000471322 KRT222Q8N1A0 295 aa18.27■□□□□ 0.51
HSPG2-208ENST00000471322 GRK7Q8WTQ7 553 aa18.27■□□□□ 0.51
HSPG2-208ENST00000471322 RXFP2Q8WXD0 754 aa18.27■□□□□ 0.51
HSPG2-208ENST00000471322 LPIN3Q9BQK8 851 aa18.27■□□□□ 0.51
HSPG2-208ENST00000471322 SYT15Q9BQS2 421 aa18.27■□□□□ 0.51
HSPG2-208ENST00000471322 NFU1Q9UMS0 254 aa18.27■□□□□ 0.51
HSPG2-208ENST00000471322 M0QZQ0 153 aa18.26■□□□□ 0.51
HSPG2-208ENST00000471322 TULP2O00295 520 aa18.26■□□□□ 0.51
HSPG2-208ENST00000471322 PAPSS1O43252 624 aaPredicted RBP18.26■□□□□ 0.51
HSPG2-208ENST00000471322 NPR3P17342 541 aa18.26■□□□□ 0.51
HSPG2-208ENST00000471322 PTGIRP43119 386 aa18.26■□□□□ 0.51
HSPG2-208ENST00000471322 KCNQ1P51787 676 aa18.26■□□□□ 0.51
HSPG2-208ENST00000471322 SLC25A11Q02978 314 aaKnown RBP18.26■□□□□ 0.51
HSPG2-208ENST00000471322 CCNG2Q16589 344 aa18.26■□□□□ 0.51
HSPG2-208ENST00000471322 TFDP3Q5H9I0 405 aa18.26■□□□□ 0.51
HSPG2-208ENST00000471322 RSPO2Q6UXX9 243 aaPredicted RBP18.26■□□□□ 0.51
HSPG2-208ENST00000471322 SLC26A9Q7LBE3 791 aa18.26■□□□□ 0.51
HSPG2-208ENST00000471322 JAMLQ86YT9 394 aa18.26■□□□□ 0.51
HSPG2-208ENST00000471322 SCUBE3Q8IX30 993 aa18.26■□□□□ 0.51
HSPG2-208ENST00000471322 KCTD13Q8WZ19 329 aa18.26■□□□□ 0.51
HSPG2-208ENST00000471322 RNF25Q96BH1 459 aaPredicted RBP18.26■□□□□ 0.51
HSPG2-208ENST00000471322 SUSD3Q96L08 255 aa18.26■□□□□ 0.51
HSPG2-208ENST00000471322 MED10Q9BTT4 135 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms