RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 SMCR8Q8TEV9 937 aaPredicted RBP1.75□□□□□ -2.13
UBXN4-207ENST00000471246 CTHRC1Q96CG8 243 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 APIPQ96GX9 242 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 ZNF668Q96K58 619 aaPredicted RBP1.75□□□□□ -2.13
UBXN4-207ENST00000471246 HS6ST2Q96MM7 605 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 CHST8Q9H2A9 424 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 ZNF287Q9HBT7 754 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 TRIM36Q9NQ86 728 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 ELOVL5Q9NYP7 299 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 RGS17Q9UGC6 210 aaPredicted RBP1.75□□□□□ -2.13
UBXN4-207ENST00000471246 TCEAL9Q9UHQ7 104 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 VPS51Q9UID3 782 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 ITGB1BP2Q9UKP3 347 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 G3BP2Q9UN86 482 aaKnown RBP1.75□□□□□ -2.13
UBXN4-207ENST00000471246 PCDHGB6Q9Y5F9 930 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 FRMPD2Q68DX3 1309 aaPredicted RBP1.74□□□□□ -2.13
UBXN4-207ENST00000471246 LOC105371045A0A1W2PR82 267 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 GOLGA6CA6NDK9 693 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 GOLGA6BA6NDN3 693 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 A8MVJ9 347 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 PRR23D1E9PI22 279 aaPredicted RBP1.74□□□□□ -2.13
UBXN4-207ENST00000471246 FCHO1O14526 889 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 KRTAP5-8O75690 187 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 INMTO95050 263 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 MT-ND5P03915 603 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 A1BGP04217 495 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 GOLGA6DP0CG33 693 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 PRR23D2P0DMB1 279 aaPredicted RBP1.74□□□□□ -2.13
UBXN4-207ENST00000471246 RHCEP18577 417 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 ADRA1DP25100 572 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 HTR7P34969 479 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 THBS4P35443 961 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 GATMP50440 423 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 CCT4P50991 539 aaKnown RBP1.74□□□□□ -2.13
UBXN4-207ENST00000471246 PLCD1P51178 756 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 TXNL4AP83876 142 aaKnown RBP1.74□□□□□ -2.13
UBXN4-207ENST00000471246 RHDQ02161 417 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 GHRHRQ02643 423 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 DEUP1Q05D60 604 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 SEMA5AQ13591 1074 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 MFSD13AQ14CX5 517 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 RABEP1Q15276 862 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 SEC23BQ15437 767 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 TRIP6Q15654 476 aaKnown RBP1.74□□□□□ -2.13
UBXN4-207ENST00000471246 ST3GAL2Q16842 350 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 GFOD2Q3B7J2 385 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 C4orf46Q504U0 113 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 CC2D1BQ5T0F9 858 aaKnown RBP1.74□□□□□ -2.13
UBXN4-207ENST00000471246 PXDC1Q5TGL8 231 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 MEX3CQ5U5Q3 659 aaKnown RBP1.74□□□□□ -2.13
UBXN4-207ENST00000471246 PLAG1Q6DJT9 500 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 SHC4Q6S5L8 630 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 DLK2Q6UY11 383 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 USP43Q70EL4 1123 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 UNC13DQ70J99 1090 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 TECPR1Q7Z6L1 1165 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 NANOGP1Q8N7R0 232 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 C11orf44Q8N8P7 122 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 NRACQ8N912 160 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 GADD45GIP1Q8TAE8 222 aaPredicted RBP1.74□□□□□ -2.13
UBXN4-207ENST00000471246 ZNF398Q8TD17 642 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 IPCEF1Q8WWN9 437 aaPredicted RBP1.74□□□□□ -2.13
UBXN4-207ENST00000471246 MAP4K1Q92918 833 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 CUL5Q93034 780 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 TSR2Q969E8 191 aaKnown RBP1.74□□□□□ -2.13
UBXN4-207ENST00000471246 MSLNLQ96KJ4 702 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 SNX22Q96L94 193 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 CCDC17Q96LX7 622 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 HIST1H2AAQ96QV6 131 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 SELENOOQ9BVL4 669 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 APOL5Q9BWW9 433 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 BTBD1Q9H0C5 482 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 FAM83DQ9H4H8 585 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 PRDM11Q9NQV5 511 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 OBP2AQ9NY56 170 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 GOLGA6AQ9NYA3 693 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 KLHL42Q9P2K6 505 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 DNAJB11Q9UBS4 358 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 ZNF212Q9UDV6 495 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 STEAP1Q9UHE8 339 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 ASAP1Q9ULH1 1129 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 SLC27A6Q9Y2P4 619 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 AFG3L2Q9Y4W6 797 aa1.74□□□□□ -2.13
UBXN4-207ENST00000471246 F8W8V4 182 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 H3BNC9 293 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 SOCS2O14508 198 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 CA12O43570 354 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 SNX2O60749 519 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 PRAMEF2O60811 474 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 FGBP02675 491 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 ANXA2P07355 339 aaKnown RBP1.73□□□□□ -2.13
UBXN4-207ENST00000471246 CYP19A1P11511 503 aaPredicted RBP1.73□□□□□ -2.13
UBXN4-207ENST00000471246 CD19P15391 556 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 ATF7P17544 494 aaPredicted RBP1.73□□□□□ -2.13
UBXN4-207ENST00000471246 ATF3P18847 181 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 YY1P25490 414 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 HOXD9P28356 352 aaPredicted RBP1.73□□□□□ -2.13
UBXN4-207ENST00000471246 COPAP53621 1224 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 EIF4A1P60842 406 aaKnown RBP1.73□□□□□ -2.13
UBXN4-207ENST00000471246 YPEL5P62699 121 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms