RNA–Protein interactions for RNA: ENST00000469560.1

PMPCB-207, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 1,615 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-207ENST00000469560 BMP8BP34820 402 aa7.39□□□□□ -1.23
PMPCB-207ENST00000469560 GTF2F1P35269 517 aaKnown RBP eCLIP7.39□□□□□ -1.23
PMPCB-207ENST00000469560 SLC6A3Q01959 620 aa7.39□□□□□ -1.23
PMPCB-207ENST00000469560 EIF4EBP2Q13542 120 aaPredicted RBP7.39□□□□□ -1.23
PMPCB-207ENST00000469560 MESDQ14696 234 aa7.39□□□□□ -1.23
PMPCB-207ENST00000469560 ARHGAP29Q52LW3 1261 aa7.39□□□□□ -1.23
PMPCB-207ENST00000469560 OR6B2Q6IFH4 312 aa7.39□□□□□ -1.23
PMPCB-207ENST00000469560 TMEM150AQ86TG1 271 aa7.39□□□□□ -1.23
PMPCB-207ENST00000469560 VN1R2Q8NFZ6 395 aa7.39□□□□□ -1.23
PMPCB-207ENST00000469560 C1orf216Q8TAB5 229 aa7.39□□□□□ -1.23
PMPCB-207ENST00000469560 SMARCD1Q96GM5 515 aa7.39□□□□□ -1.23
PMPCB-207ENST00000469560 HES6Q96HZ4 224 aa7.39□□□□□ -1.23
PMPCB-207ENST00000469560 HSFY1Q96LI6 401 aa7.39□□□□□ -1.23
PMPCB-207ENST00000469560 C8orf48Q96LL4 319 aa7.39□□□□□ -1.23
PMPCB-207ENST00000469560 LRRC3Q9BY71 257 aa7.39□□□□□ -1.23
PMPCB-207ENST00000469560 UBXN6Q9BZV1 441 aa7.39□□□□□ -1.23
PMPCB-207ENST00000469560 CTTNBP2NLQ9P2B4 639 aa7.39□□□□□ -1.23
PMPCB-207ENST00000469560 ANAPC7Q9UJX3 599 aa7.39□□□□□ -1.23
PMPCB-207ENST00000469560 NAALADL1Q9UQQ1 740 aa7.39□□□□□ -1.23
PMPCB-207ENST00000469560 NR2E1Q9Y466 385 aa7.39□□□□□ -1.23
PMPCB-207ENST00000469560 PCDHA11Q9Y5I1 949 aa7.39□□□□□ -1.23
PMPCB-207ENST00000469560 DOCK6Q96HP0 2047 aa7.39□□□□□ -1.23
PMPCB-207ENST00000469560 ZNF638Q14966 1978 aaKnown RBP7.39□□□□□ -1.23
PMPCB-207ENST00000469560 NOTCH4Q99466 2003 aa7.39□□□□□ -1.23
PMPCB-207ENST00000469560 CCP110O43303 1012 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 TGM5O43548 720 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 LRCH4O75427 683 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 PROSCO94903 275 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 DKK1O94907 266 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 CXCL14O95715 111 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 CALB1P05937 261 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 CPB1P15086 417 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 ATF2P15336 505 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 CXCR5P32302 372 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 MAGEA11P43364 429 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 NOP2P46087 812 aaKnown RBP7.38□□□□□ -1.23
PMPCB-207ENST00000469560 SLC5A3P53794 718 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 HDAC4P56524 1084 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 RNASE9P60153 205 aaKnown RBP7.38□□□□□ -1.23
PMPCB-207ENST00000469560 MRPS5P82675 430 aaKnown RBP7.38□□□□□ -1.23
PMPCB-207ENST00000469560 TSPY1Q01534 308 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 ADCY2Q08462 1091 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 ELAVL2Q12926 359 aaKnown RBP7.38□□□□□ -1.23
PMPCB-207ENST00000469560 FAM102AQ5T9C2 384 aaPredicted RBP7.38□□□□□ -1.23
PMPCB-207ENST00000469560 PLPP4Q5VZY2 271 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 PAPD7Q5XG87 772 aaKnown RBP7.38□□□□□ -1.23
PMPCB-207ENST00000469560 SLC26A9Q7LBE3 791 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 SPATA2LQ8IUW3 424 aaPredicted RBP7.38□□□□□ -1.23
PMPCB-207ENST00000469560 SCN4BQ8IWT1 228 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 MRPL43Q8N983 215 aaKnown RBP7.38□□□□□ -1.23
PMPCB-207ENST00000469560 ZNF461Q8TAF7 563 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 SLC22A17Q8WUG5 538 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 RXFP2Q8WXD0 754 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 NT5C3BQ969T7 300 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 ACSF2Q96CM8 615 aaPredicted RBP7.38□□□□□ -1.23
PMPCB-207ENST00000469560 FUBP3Q96I24 572 aaKnown RBP eCLIP7.38□□□□□ -1.23
PMPCB-207ENST00000469560 CFAP57Q96MR6 1250 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 SLC2A13Q96QE2 648 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 PSMB7Q99436 277 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 TCF25Q9BQ70 676 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 OCSTAMPQ9BR26 566 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 ZNF334Q9HCZ1 680 aaPredicted RBP7.38□□□□□ -1.23
PMPCB-207ENST00000469560 DMAP1Q9NPF5 467 aaPredicted RBP7.38□□□□□ -1.23
PMPCB-207ENST00000469560 PARVAQ9NVD7 372 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 FNIP2Q9P278 1114 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 UVRAGQ9P2Y5 699 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 HESX1Q9UBX0 185 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 NUDT5Q9UKK9 219 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 PCDHB5Q9Y5E4 795 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 PCDHB12Q9Y5F1 795 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 IRAK3Q9Y616 596 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 TCRBV7S2A1N4TA0A589 114 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 C3orf70A6NLC5 250 aaPredicted RBP7.38□□□□□ -1.23
PMPCB-207ENST00000469560 H3BNC9 293 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 H7C4K7 107 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 SOX1O00570 391 aaPredicted RBP7.38□□□□□ -1.23
PMPCB-207ENST00000469560 PER2O15055 1255 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 NRDCO43847 1150 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 TBX18O95935 607 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 MYBL1P10243 752 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 KRT3P12035 628 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 MAPK1P28482 360 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 GRIK1P39086 918 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 SLC25A11Q02978 314 aaKnown RBP7.38□□□□□ -1.23
PMPCB-207ENST00000469560 KCNC3Q14003 757 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 OCLNQ16625 522 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 CA9Q16790 459 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 ZNF787Q6DD87 383 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 C11orf63Q6NUN7 778 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 DNAJC24Q6P3W2 148 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 CREG2Q8IUH2 290 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 RHOT2Q8IXI1 618 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 DCP1BQ8IZD4 617 aaKnown RBP7.38□□□□□ -1.23
PMPCB-207ENST00000469560 DEFB106AQ8N104 65 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 NIPA2Q8N8Q9 360 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 GDPD5Q8WTR4 605 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 EDEM1Q92611 657 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 CENPIQ92674 756 aaPredicted RBP7.38□□□□□ -1.23
PMPCB-207ENST00000469560 WBP2Q969T9 261 aa7.38□□□□□ -1.23
PMPCB-207ENST00000469560 MS4A14Q96JA4 679 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms