RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 A8MXQ7 604 aa13.59□□□□□ -0.23
TRAPPC12-216ENST00000469400 PRRT4C9JH25 899 aa13.59□□□□□ -0.23
TRAPPC12-216ENST00000469400 NEDD8-MDP1E9PL57 170 aa13.59□□□□□ -0.23
TRAPPC12-216ENST00000469400 CACNG3O60359 315 aa13.59□□□□□ -0.23
TRAPPC12-216ENST00000469400 ZDHHC11BP0C7U3 371 aa13.59□□□□□ -0.23
TRAPPC12-216ENST00000469400 SLC5A3P53794 718 aa13.59□□□□□ -0.23
TRAPPC12-216ENST00000469400 TNNC1P63316 161 aa13.59□□□□□ -0.23
TRAPPC12-216ENST00000469400 WDR72Q3MJ13 1102 aa13.59□□□□□ -0.23
TRAPPC12-216ENST00000469400 KIAA1324Q6UXG2 1013 aaKnown RBP13.59□□□□□ -0.23
TRAPPC12-216ENST00000469400 SETD7Q8WTS6 366 aaKnown RBP13.59□□□□□ -0.23
TRAPPC12-216ENST00000469400 SCFD1Q8WVM8 642 aa13.59□□□□□ -0.23
TRAPPC12-216ENST00000469400 LRIG1Q96JA1 1093 aa13.59□□□□□ -0.23
TRAPPC12-216ENST00000469400 XPO6Q96QU8 1125 aaKnown RBP13.59□□□□□ -0.23
TRAPPC12-216ENST00000469400 IL21RQ9HBE5 538 aa13.59□□□□□ -0.23
TRAPPC12-216ENST00000469400 PANK4Q9NVE7 773 aa13.59□□□□□ -0.23
TRAPPC12-216ENST00000469400 CACNA2D2Q9NY47 1150 aa13.59□□□□□ -0.23
TRAPPC12-216ENST00000469400 IL37Q9NZH6 218 aa13.59□□□□□ -0.23
TRAPPC12-216ENST00000469400 GMIPQ9P107 970 aa13.59□□□□□ -0.23
TRAPPC12-216ENST00000469400 KIAA1522Q9P206 1035 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC12-216ENST00000469400 A0A1B0GTW7 788 aa13.58□□□□□ -0.24
TRAPPC12-216ENST00000469400 WASH3PC4AMC7 463 aa13.58□□□□□ -0.24
TRAPPC12-216ENST00000469400 GREM1O60565 184 aa13.58□□□□□ -0.24
TRAPPC12-216ENST00000469400 DLATP10515 647 aaKnown RBP13.58□□□□□ -0.24
TRAPPC12-216ENST00000469400 TYRP14679 529 aa13.58□□□□□ -0.24
TRAPPC12-216ENST00000469400 CD6P30203 668 aa13.58□□□□□ -0.24
TRAPPC12-216ENST00000469400 LARP1BQ659C4 914 aaKnown RBP13.58□□□□□ -0.24
TRAPPC12-216ENST00000469400 TPGS1Q6ZTW0 290 aa13.58□□□□□ -0.24
TRAPPC12-216ENST00000469400 HTR3DQ70Z44 454 aa13.58□□□□□ -0.24
TRAPPC12-216ENST00000469400 TMPRSS7Q7RTY8 843 aa13.58□□□□□ -0.24
TRAPPC12-216ENST00000469400 BRAPQ7Z569 592 aa13.58□□□□□ -0.24
TRAPPC12-216ENST00000469400 DNASE2BQ8WZ79 361 aa13.58□□□□□ -0.24
TRAPPC12-216ENST00000469400 TOE1Q96GM8 510 aaKnown RBP13.58□□□□□ -0.24
TRAPPC12-216ENST00000469400 BBS2Q9BXC9 721 aa13.58□□□□□ -0.24
TRAPPC12-216ENST00000469400 TRIM9Q9C026 710 aa13.58□□□□□ -0.24
TRAPPC12-216ENST00000469400 NACA2Q9H009 215 aa13.58□□□□□ -0.24
TRAPPC12-216ENST00000469400 SCUBE2Q9NQ36 999 aa13.58□□□□□ -0.24
TRAPPC12-216ENST00000469400 HSPBP1Q9NZL4 362 aa13.58□□□□□ -0.24
TRAPPC12-216ENST00000469400 FBXO2Q9UK22 296 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC12-216ENST00000469400 NFE2L3Q9Y4A8 694 aa13.58□□□□□ -0.24
TRAPPC12-216ENST00000469400 HELZ2Q9BYK8 2649 aaKnown RBP13.58□□□□□ -0.24
TRAPPC12-216ENST00000469400 FAM92AA1XBS5 289 aa13.57□□□□□ -0.24
TRAPPC12-216ENST00000469400 EIF4E1BA6NMX2 242 aaKnown RBP13.57□□□□□ -0.24
TRAPPC12-216ENST00000469400 MEI4A8MW99 385 aa13.57□□□□□ -0.24
TRAPPC12-216ENST00000469400 GFRA2O00451 464 aa13.57□□□□□ -0.24
TRAPPC12-216ENST00000469400 ZIC2O95409 532 aaPredicted RBP13.57□□□□□ -0.24
TRAPPC12-216ENST00000469400 TBX18O95935 607 aa13.57□□□□□ -0.24
TRAPPC12-216ENST00000469400 NCAM1P13591 858 aa13.57□□□□□ -0.24
TRAPPC12-216ENST00000469400 TNNI1P19237 187 aa13.57□□□□□ -0.24
TRAPPC12-216ENST00000469400 PGFP49763 221 aa13.57□□□□□ -0.24
TRAPPC12-216ENST00000469400 PAQR9Q6ZVX9 377 aa13.57□□□□□ -0.24
TRAPPC12-216ENST00000469400 ZCCHC9Q8N567 271 aaKnown RBP13.57□□□□□ -0.24
TRAPPC12-216ENST00000469400 RDH13Q8NBN7 331 aa13.57□□□□□ -0.24
TRAPPC12-216ENST00000469400 GLIS3Q8NEA6 775 aa13.57□□□□□ -0.24
TRAPPC12-216ENST00000469400 CLIC6Q96NY7 704 aa13.57□□□□□ -0.24
TRAPPC12-216ENST00000469400 MIR1-1HGQ9H1L0 117 aa13.57□□□□□ -0.24
TRAPPC12-216ENST00000469400 GAREM1Q9H706 876 aa13.57□□□□□ -0.24
TRAPPC12-216ENST00000469400 KIAA1586Q9HCI6 787 aa13.57□□□□□ -0.24
TRAPPC12-216ENST00000469400 TOR4AQ9NXH8 423 aa13.57□□□□□ -0.24
TRAPPC12-216ENST00000469400 MARK1Q9P0L2 795 aa13.57□□□□□ -0.24
TRAPPC12-216ENST00000469400 WDR35Q9P2L0 1181 aa13.57□□□□□ -0.24
TRAPPC12-216ENST00000469400 DKK4Q9UBT3 224 aa13.57□□□□□ -0.24
TRAPPC12-216ENST00000469400 NXF1Q9UBU9 619 aaKnown RBP13.57□□□□□ -0.24
TRAPPC12-216ENST00000469400 SMC3Q9UQE7 1217 aa13.57□□□□□ -0.24
TRAPPC12-216ENST00000469400 SRPRBQ9Y5M8 271 aaKnown RBP13.57□□□□□ -0.24
TRAPPC12-216ENST00000469400 CLIC4Q9Y696 253 aa13.57□□□□□ -0.24
TRAPPC12-216ENST00000469400 TLR5O60602 858 aa13.56□□□□□ -0.24
TRAPPC12-216ENST00000469400 DKK1O94907 266 aa13.56□□□□□ -0.24
TRAPPC12-216ENST00000469400 CISD3P0C7P0 127 aa13.56□□□□□ -0.24
TRAPPC12-216ENST00000469400 HOXD13P35453 343 aa13.56□□□□□ -0.24
TRAPPC12-216ENST00000469400 TXLNAP40222 546 aa13.56□□□□□ -0.24
TRAPPC12-216ENST00000469400 DGKGP49619 791 aa13.56□□□□□ -0.24
TRAPPC12-216ENST00000469400 RABEP1Q15276 862 aa13.56□□□□□ -0.24
TRAPPC12-216ENST00000469400 SNRNP35Q16560 246 aaKnown RBP13.56□□□□□ -0.24
TRAPPC12-216ENST00000469400 CCDC73Q6ZRK6 1079 aa13.56□□□□□ -0.24
TRAPPC12-216ENST00000469400 METTL3Q86U44 580 aaKnown RBP13.56□□□□□ -0.24
TRAPPC12-216ENST00000469400 FAM35AQ86V20 835 aa13.56□□□□□ -0.24
TRAPPC12-216ENST00000469400 MARCH9Q86YJ5 346 aa13.56□□□□□ -0.24
TRAPPC12-216ENST00000469400 CADM4Q8NFZ8 388 aa13.56□□□□□ -0.24
TRAPPC12-216ENST00000469400 BAHD1Q8TBE0 780 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC12-216ENST00000469400 HPS3Q969F9 1004 aa13.56□□□□□ -0.24
TRAPPC12-216ENST00000469400 COL26A1Q96A83 441 aa13.56□□□□□ -0.24
TRAPPC12-216ENST00000469400 CCDC127Q96BQ5 260 aa13.56□□□□□ -0.24
TRAPPC12-216ENST00000469400 MED10Q9BTT4 135 aa13.56□□□□□ -0.24
TRAPPC12-216ENST00000469400 GPR174Q9BXC1 333 aa13.56□□□□□ -0.24
TRAPPC12-216ENST00000469400 KLF16Q9BXK1 252 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC12-216ENST00000469400 PANK2Q9BZ23 570 aa13.56□□□□□ -0.24
TRAPPC12-216ENST00000469400 XYLT2Q9H1B5 865 aa13.56□□□□□ -0.24
TRAPPC12-216ENST00000469400 DMAP1Q9NPF5 467 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC12-216ENST00000469400 ITM2CQ9NQX7 267 aa13.56□□□□□ -0.24
TRAPPC12-216ENST00000469400 TM7SF3Q9NS93 570 aa13.56□□□□□ -0.24
TRAPPC12-216ENST00000469400 COMMD8Q9NX08 183 aa13.56□□□□□ -0.24
TRAPPC12-216ENST00000469400 WSB2Q9NYS7 404 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC12-216ENST00000469400 USP36Q9P275 1121 aaKnown RBP13.56□□□□□ -0.24
TRAPPC12-216ENST00000469400 FNDC3AQ9Y2H6 1198 aaKnown RBP13.56□□□□□ -0.24
TRAPPC12-216ENST00000469400 ATP8B3O60423 1300 aa13.56□□□□□ -0.24
TRAPPC12-216ENST00000469400 KNL1Q8NG31 2342 aa13.56□□□□□ -0.24
TRAPPC12-216ENST00000469400 BCAT2O15382 392 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC12-216ENST00000469400 CILPO75339 1184 aa13.55□□□□□ -0.24
TRAPPC12-216ENST00000469400 CD2BP2O95400 341 aaKnown RBP13.55□□□□□ -0.24
TRAPPC12-216ENST00000469400 STAU1O95793 577 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms