RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 KRT82Q9NSB4 513 aa12.96□□□□□ -0.33
COL5A1-207ENST00000469093 DMAC2Q9NW81 257 aa12.96□□□□□ -0.33
COL5A1-207ENST00000469093 ATXN2Q99700 1313 aaKnown RBP12.95□□□□□ -0.34
COL5A1-207ENST00000469093 K7ELQ4 463 aaPredicted RBP12.95□□□□□ -0.34
COL5A1-207ENST00000469093 AP5Z1O43299 807 aa12.95□□□□□ -0.34
COL5A1-207ENST00000469093 TLR5O60602 858 aa12.95□□□□□ -0.34
COL5A1-207ENST00000469093 IRF1P10914 325 aa12.95□□□□□ -0.34
COL5A1-207ENST00000469093 CCDC130P13994 396 aa12.95□□□□□ -0.34
COL5A1-207ENST00000469093 HOXB2P14652 356 aa12.95□□□□□ -0.34
COL5A1-207ENST00000469093 HOXD12P35452 270 aa12.95□□□□□ -0.34
COL5A1-207ENST00000469093 DPP6P42658 865 aa12.95□□□□□ -0.34
COL5A1-207ENST00000469093 NDST1P52848 882 aa12.95□□□□□ -0.34
COL5A1-207ENST00000469093 MAP3K7CLP57077 242 aa12.95□□□□□ -0.34
COL5A1-207ENST00000469093 DLG4P78352 724 aa12.95□□□□□ -0.34
COL5A1-207ENST00000469093 RPL6Q02878 288 aaKnown RBP12.95□□□□□ -0.34
COL5A1-207ENST00000469093 ZNF33AQ06730 810 aa12.95□□□□□ -0.34
COL5A1-207ENST00000469093 STK4Q13043 487 aa12.95□□□□□ -0.34
COL5A1-207ENST00000469093 SEMA3BQ13214 749 aa12.95□□□□□ -0.34
COL5A1-207ENST00000469093 ORC1Q13415 861 aa12.95□□□□□ -0.34
COL5A1-207ENST00000469093 DUOXA1Q1HG43 343 aa12.95□□□□□ -0.34
COL5A1-207ENST00000469093 SGSM1Q2NKQ1 1148 aa12.95□□□□□ -0.34
COL5A1-207ENST00000469093 SLC36A4Q6YBV0 504 aa12.95□□□□□ -0.34
COL5A1-207ENST00000469093 SCARA5Q6ZMJ2 495 aa12.95□□□□□ -0.34
COL5A1-207ENST00000469093 TRMT11Q7Z4G4 463 aaKnown RBP12.95□□□□□ -0.34
COL5A1-207ENST00000469093 PIP4P1Q86T03 277 aa12.95□□□□□ -0.34
COL5A1-207ENST00000469093 SLC9A9Q8IVB4 645 aa12.95□□□□□ -0.34
COL5A1-207ENST00000469093 C12orf29Q8N999 325 aa12.95□□□□□ -0.34
COL5A1-207ENST00000469093 GOLGA5Q8TBA6 731 aa12.95□□□□□ -0.34
COL5A1-207ENST00000469093 SLC2A14Q8TDB8 520 aa12.95□□□□□ -0.34
COL5A1-207ENST00000469093 TMEM174Q8WUU8 243 aa12.95□□□□□ -0.34
COL5A1-207ENST00000469093 GATA6Q92908 595 aa12.95□□□□□ -0.34
COL5A1-207ENST00000469093 FBXO44Q9H4M3 255 aa12.95□□□□□ -0.34
COL5A1-207ENST00000469093 SLC32A1Q9H598 525 aa12.95□□□□□ -0.34
COL5A1-207ENST00000469093 TLR8Q9NR97 1041 aaKnown RBP12.95□□□□□ -0.34
COL5A1-207ENST00000469093 DNAJC17Q9NVM6 304 aaKnown RBP12.95□□□□□ -0.34
COL5A1-207ENST00000469093 OSER1Q9NX31 292 aa12.95□□□□□ -0.34
COL5A1-207ENST00000469093 CALCOCO1Q9P1Z2 691 aa12.95□□□□□ -0.34
COL5A1-207ENST00000469093 PCDHA7Q9UN72 937 aa12.95□□□□□ -0.34
COL5A1-207ENST00000469093 SLC6A14Q9UN76 642 aa12.95□□□□□ -0.34
COL5A1-207ENST00000469093 ZFHX4Q86UP3 3567 aa12.95□□□□□ -0.34
COL5A1-207ENST00000469093 IGHV1OR15-9A0A0B4J2B8 117 aa12.94□□□□□ -0.34
COL5A1-207ENST00000469093 SPAARA0A1B0GVQ0 90 aa12.94□□□□□ -0.34
COL5A1-207ENST00000469093 UPK3BL1B0FP48 263 aa12.94□□□□□ -0.34
COL5A1-207ENST00000469093 PRRT4C9JH25 899 aa12.94□□□□□ -0.34
COL5A1-207ENST00000469093 UPK3BL2E5RIL1 263 aa12.94□□□□□ -0.34
COL5A1-207ENST00000469093 KLRC4O43908 158 aa12.94□□□□□ -0.34
COL5A1-207ENST00000469093 RPN1P04843 607 aaKnown RBP12.94□□□□□ -0.34
COL5A1-207ENST00000469093 CFIP05156 583 aa12.94□□□□□ -0.34
COL5A1-207ENST00000469093 SERPINF2P08697 491 aa12.94□□□□□ -0.34
COL5A1-207ENST00000469093 ATP5C1P36542 298 aaKnown RBP12.94□□□□□ -0.34
COL5A1-207ENST00000469093 GFPT1Q06210 699 aaPredicted RBP12.94□□□□□ -0.34
COL5A1-207ENST00000469093 ZACNQ401N2 412 aa12.94□□□□□ -0.34
COL5A1-207ENST00000469093 FOXD4L5Q5VV16 416 aaPredicted RBP12.94□□□□□ -0.34
COL5A1-207ENST00000469093 EGFLAMQ63HQ2 1017 aa12.94□□□□□ -0.34
COL5A1-207ENST00000469093 GRAMD4Q6IC98 578 aa12.94□□□□□ -0.34
COL5A1-207ENST00000469093 KIAA1211LQ6NV74 962 aa12.94□□□□□ -0.34
COL5A1-207ENST00000469093 TPGS1Q6ZTW0 290 aa12.94□□□□□ -0.34
COL5A1-207ENST00000469093 TOGARAM2Q6ZUX3 1019 aa12.94□□□□□ -0.34
COL5A1-207ENST00000469093 SV2AQ7L0J3 742 aa12.94□□□□□ -0.34
COL5A1-207ENST00000469093 UNC93AQ86WB7 457 aa12.94□□□□□ -0.34
COL5A1-207ENST00000469093 GRAMD1CQ8IYS0 662 aa12.94□□□□□ -0.34
COL5A1-207ENST00000469093 CEP76Q8TAP6 659 aa12.94□□□□□ -0.34
COL5A1-207ENST00000469093 FOXD4L4Q8WXT5 416 aaPredicted RBP12.94□□□□□ -0.34
COL5A1-207ENST00000469093 BBS2Q9BXC9 721 aa12.94□□□□□ -0.34
COL5A1-207ENST00000469093 CAPN10Q9HC96 672 aa12.94□□□□□ -0.34
COL5A1-207ENST00000469093 CYLDQ9NQC7 956 aa12.94□□□□□ -0.34
COL5A1-207ENST00000469093 FAM49BQ9NUQ9 324 aa12.94□□□□□ -0.34
COL5A1-207ENST00000469093 MARK1Q9P0L2 795 aa12.94□□□□□ -0.34
COL5A1-207ENST00000469093 WDR35Q9P2L0 1181 aa12.94□□□□□ -0.34
COL5A1-207ENST00000469093 HMGXB4Q9UGU5 601 aa12.94□□□□□ -0.34
COL5A1-207ENST00000469093 SCML2Q9UQR0 700 aa12.94□□□□□ -0.34
COL5A1-207ENST00000469093 HHLA1C9JL84 531 aa12.93□□□□□ -0.34
COL5A1-207ENST00000469093 NEDD8-MDP1E9PL57 170 aa12.93□□□□□ -0.34
COL5A1-207ENST00000469093 IKBKBO14920 756 aa12.93□□□□□ -0.34
COL5A1-207ENST00000469093 HYAL3O43820 417 aaPredicted RBP12.93□□□□□ -0.34
COL5A1-207ENST00000469093 CACNG3O60359 315 aa12.93□□□□□ -0.34
COL5A1-207ENST00000469093 ZNF217O75362 1048 aa12.93□□□□□ -0.34
COL5A1-207ENST00000469093 CLSTN1O94985 981 aa12.93□□□□□ -0.34
COL5A1-207ENST00000469093 ASS1P00966 412 aaKnown RBP12.93□□□□□ -0.34
COL5A1-207ENST00000469093 CISD3P0C7P0 127 aa12.93□□□□□ -0.34
COL5A1-207ENST00000469093 P4HA1P13674 534 aa12.93□□□□□ -0.34
COL5A1-207ENST00000469093 TYRP14679 529 aa12.93□□□□□ -0.34
COL5A1-207ENST00000469093 FOXD4L6Q3SYB3 417 aaPredicted RBP12.93□□□□□ -0.34
COL5A1-207ENST00000469093 RESP18Q5W5W9 173 aa12.93□□□□□ -0.34
COL5A1-207ENST00000469093 SPOPLQ6IQ16 392 aa12.93□□□□□ -0.34
COL5A1-207ENST00000469093 SDE2Q6IQ49 451 aa12.93□□□□□ -0.34
COL5A1-207ENST00000469093 FOXD4L3Q6VB84 417 aaPredicted RBP12.93□□□□□ -0.34
COL5A1-207ENST00000469093 GPRIN1Q7Z2K8 1008 aa12.93□□□□□ -0.34
COL5A1-207ENST00000469093 SLC41A1Q8IVJ1 513 aa12.93□□□□□ -0.34
COL5A1-207ENST00000469093 CHPFQ8IZ52 775 aa12.93□□□□□ -0.34
COL5A1-207ENST00000469093 KIAA0895Q8NCT3 520 aa12.93□□□□□ -0.34
COL5A1-207ENST00000469093 TMC2Q8TDI7 906 aa12.93□□□□□ -0.34
COL5A1-207ENST00000469093 IPO4Q8TEX9 1081 aaKnown RBP12.93□□□□□ -0.34
COL5A1-207ENST00000469093 TAF4BQ92750 862 aa12.93□□□□□ -0.34
COL5A1-207ENST00000469093 ERLEC1Q96DZ1 483 aa12.93□□□□□ -0.34
COL5A1-207ENST00000469093 XPO6Q96QU8 1125 aaKnown RBP12.93□□□□□ -0.34
COL5A1-207ENST00000469093 HNRNPABQ99729 332 aaKnown RBP12.93□□□□□ -0.34
COL5A1-207ENST00000469093 GABRG3Q99928 467 aa12.93□□□□□ -0.34
COL5A1-207ENST00000469093 GTPBP2Q9BX10 602 aaKnown RBP12.93□□□□□ -0.34
COL5A1-207ENST00000469093 KCTD10Q9H3F6 313 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms