RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 FAM118BQ9BPY3 351 aa19.79■□□□□ 0.76
SMC4-209ENST00000468653 ERP44Q9BS26 406 aa19.79■□□□□ 0.76
SMC4-209ENST00000468653 OXCT2Q9BYC2 517 aaPredicted RBP19.79■□□□□ 0.76
SMC4-209ENST00000468653 ADAM33Q9BZ11 813 aa19.79■□□□□ 0.76
SMC4-209ENST00000468653 TRIM31Q9BZY9 425 aa19.79■□□□□ 0.76
SMC4-209ENST00000468653 MCOLN1Q9GZU1 580 aa19.79■□□□□ 0.76
SMC4-209ENST00000468653 M0QYT0 321 aa19.78■□□□□ 0.76
SMC4-209ENST00000468653 MDM4O15151 490 aa19.78■□□□□ 0.76
SMC4-209ENST00000468653 BAIAP3O94812 1187 aa19.78■□□□□ 0.76
SMC4-209ENST00000468653 NCAM1P13591 858 aa19.78■□□□□ 0.76
SMC4-209ENST00000468653 TNNT3P45378 269 aaPredicted RBP19.78■□□□□ 0.76
SMC4-209ENST00000468653 SLC5A3P53794 718 aa19.78■□□□□ 0.76
SMC4-209ENST00000468653 EPHB4P54760 987 aa19.78■□□□□ 0.76
SMC4-209ENST00000468653 DYNLT1P63172 113 aa19.78■□□□□ 0.76
SMC4-209ENST00000468653 IFRD2Q12894 506 aaPredicted RBP19.78■□□□□ 0.76
SMC4-209ENST00000468653 PPP1R7Q15435 360 aa19.78■□□□□ 0.76
SMC4-209ENST00000468653 ZC3H12AQ5D1E8 599 aaKnown RBP19.78■□□□□ 0.76
SMC4-209ENST00000468653 ATL2Q8NHH9 583 aa19.78■□□□□ 0.76
SMC4-209ENST00000468653 SCAMP5Q8TAC9 235 aa19.78■□□□□ 0.76
SMC4-209ENST00000468653 AENQ8WTP8 325 aaKnown RBP19.78■□□□□ 0.76
SMC4-209ENST00000468653 NT5C3BQ969T7 300 aa19.78■□□□□ 0.76
SMC4-209ENST00000468653 IGSF21Q96ID5 467 aa19.78■□□□□ 0.76
SMC4-209ENST00000468653 DPH5Q9H2P9 285 aa19.78■□□□□ 0.76
SMC4-209ENST00000468653 IL23AQ9NPF7 189 aa19.78■□□□□ 0.76
SMC4-209ENST00000468653 FAM114A2Q9NRY5 505 aa19.78■□□□□ 0.76
SMC4-209ENST00000468653 PRKAG2Q9UGJ0 569 aa19.78■□□□□ 0.76
SMC4-209ENST00000468653 USP3Q9Y6I4 520 aa19.78■□□□□ 0.76
SMC4-209ENST00000468653 NLRC5Q86WI3 1866 aa19.78■□□□□ 0.76
SMC4-209ENST00000468653 SYNJ2BP-COX16A0A087WUM0 186 aa19.78■□□□□ 0.76
SMC4-209ENST00000468653 BHMG1C9JSJ3 638 aaPredicted RBP19.78■□□□□ 0.76
SMC4-209ENST00000468653 TRIM66O15016 1216 aa19.78■□□□□ 0.76
SMC4-209ENST00000468653 DAPK3O43293 454 aa19.78■□□□□ 0.76
SMC4-209ENST00000468653 CST8O60676 142 aa19.78■□□□□ 0.76
SMC4-209ENST00000468653 ENDOD1O94919 500 aa19.78■□□□□ 0.76
SMC4-209ENST00000468653 FYNP06241 537 aa19.78■□□□□ 0.76
SMC4-209ENST00000468653 RDXP35241 583 aaKnown RBP19.78■□□□□ 0.76
SMC4-209ENST00000468653 ARSEP51690 589 aa19.78■□□□□ 0.76
SMC4-209ENST00000468653 DEUP1Q05D60 604 aa19.78■□□□□ 0.76
SMC4-209ENST00000468653 NME3Q13232 169 aa19.78■□□□□ 0.76
SMC4-209ENST00000468653 DPYSL3Q14195 570 aa19.78■□□□□ 0.76
SMC4-209ENST00000468653 BTG3Q14201 252 aaPredicted RBP19.78■□□□□ 0.76
SMC4-209ENST00000468653 USP41Q3LFD5 358 aa19.78■□□□□ 0.76
SMC4-209ENST00000468653 KCNT2Q6UVM3 1135 aa19.78■□□□□ 0.76
SMC4-209ENST00000468653 BBS12Q6ZW61 710 aa19.78■□□□□ 0.76
SMC4-209ENST00000468653 OTOP2Q7RTS6 562 aa19.78■□□□□ 0.76
SMC4-209ENST00000468653 BHLHA9Q7RTU4 235 aa19.78■□□□□ 0.76
SMC4-209ENST00000468653 HDXQ7Z353 690 aa19.78■□□□□ 0.76
SMC4-209ENST00000468653 DDX42Q86XP3 938 aaKnown RBP eCLIP19.78■□□□□ 0.76
SMC4-209ENST00000468653 EIF1ADQ8N9N8 165 aaKnown RBP19.78■□□□□ 0.76
SMC4-209ENST00000468653 ATAD1Q8NBU5 361 aa19.78■□□□□ 0.76
SMC4-209ENST00000468653 SLC7A14Q8TBB6 771 aa19.78■□□□□ 0.76
SMC4-209ENST00000468653 SLCO2A1Q92959 643 aa19.78■□□□□ 0.76
SMC4-209ENST00000468653 HAUS1Q96CS2 278 aa19.78■□□□□ 0.76
SMC4-209ENST00000468653 ZNF558Q96NG5 402 aa19.78■□□□□ 0.76
SMC4-209ENST00000468653 COX16Q9P0S2 106 aa19.78■□□□□ 0.76
SMC4-209ENST00000468653 PCDH10Q9P2E7 1040 aa19.78■□□□□ 0.76
SMC4-209ENST00000468653 PTPRDP23468 1912 aa19.77■□□□□ 0.76
SMC4-209ENST00000468653 LTBP2Q14767 1821 aa19.77■□□□□ 0.76
SMC4-209ENST00000468653 ATP8B1O43520 1251 aa19.77■□□□□ 0.76
SMC4-209ENST00000468653 MAGEA11P43364 429 aa19.77■□□□□ 0.76
SMC4-209ENST00000468653 PITX1P78337 314 aaPredicted RBP19.77■□□□□ 0.76
SMC4-209ENST00000468653 SMARCB1Q12824 385 aa19.77■□□□□ 0.76
SMC4-209ENST00000468653 MMRN1Q13201 1228 aa19.77■□□□□ 0.76
SMC4-209ENST00000468653 DDR2Q16832 855 aa19.77■□□□□ 0.76
SMC4-209ENST00000468653 BSPRYQ5W0U4 402 aa19.77■□□□□ 0.76
SMC4-209ENST00000468653 DUPD1Q68J44 220 aa19.77■□□□□ 0.76
SMC4-209ENST00000468653 PRSS55Q6UWB4 352 aaPredicted RBP19.77■□□□□ 0.76
SMC4-209ENST00000468653 FAM131BQ86XD5 332 aa19.77■□□□□ 0.76
SMC4-209ENST00000468653 CMTR2Q8IYT2 770 aaKnown RBP19.77■□□□□ 0.76
SMC4-209ENST00000468653 TTC13Q8NBP0 860 aa19.77■□□□□ 0.76
SMC4-209ENST00000468653 SEC14L1Q92503 715 aa19.77■□□□□ 0.76
SMC4-209ENST00000468653 EDEM1Q92611 657 aa19.77■□□□□ 0.76
SMC4-209ENST00000468653 C8orf48Q96LL4 319 aa19.77■□□□□ 0.76
SMC4-209ENST00000468653 TRIM62Q9BVG3 475 aa19.77■□□□□ 0.76
SMC4-209ENST00000468653 DHX35Q9H5Z1 703 aaKnown RBP19.77■□□□□ 0.76
SMC4-209ENST00000468653 PCDH18Q9HCL0 1135 aa19.77■□□□□ 0.76
SMC4-209ENST00000468653 RRN3Q9NYV6 651 aa19.77■□□□□ 0.76
SMC4-209ENST00000468653 CALCOCO1Q9P1Z2 691 aa19.77■□□□□ 0.76
SMC4-209ENST00000468653 TNFRSF10BO14763 440 aa19.76■□□□□ 0.75
SMC4-209ENST00000468653 LIASO43766 372 aa19.76■□□□□ 0.75
SMC4-209ENST00000468653 TBC1D4O60343 1298 aa19.76■□□□□ 0.75
SMC4-209ENST00000468653 GAS8O95995 478 aa19.76■□□□□ 0.75
SMC4-209ENST00000468653 GPR17Q13304 367 aa19.76■□□□□ 0.75
SMC4-209ENST00000468653 CA9Q16790 459 aa19.76■□□□□ 0.75
SMC4-209ENST00000468653 OTUD1Q5VV17 481 aaPredicted RBP19.76■□□□□ 0.75
SMC4-209ENST00000468653 KIAA1841Q6NSI8 718 aa19.76■□□□□ 0.75
SMC4-209ENST00000468653 EMBQ6PCB8 327 aa19.76■□□□□ 0.75
SMC4-209ENST00000468653 RSPO2Q6UXX9 243 aaPredicted RBP19.76■□□□□ 0.75
SMC4-209ENST00000468653 SYDE1Q6ZW31 735 aaPredicted RBP19.76■□□□□ 0.75
SMC4-209ENST00000468653 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.76■□□□□ 0.75
SMC4-209ENST00000468653 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.76■□□□□ 0.751e-8■■■■■ 268.2
SMC4-209ENST00000468653 GDAP1L1Q96MZ0 367 aa19.76■□□□□ 0.75
SMC4-209ENST00000468653 FUT8Q9BYC5 575 aa19.76■□□□□ 0.75
SMC4-209ENST00000468653 AP4E1Q9UPM8 1137 aa19.76■□□□□ 0.75
SMC4-209ENST00000468653 ZBBXA8MT70 800 aa19.75■□□□□ 0.75
SMC4-209ENST00000468653 LMNB2Q03252 620 aa19.75■□□□□ 0.75
SMC4-209ENST00000468653 KRT17Q04695 432 aa19.75■□□□□ 0.75
SMC4-209ENST00000468653 BYSLQ13895 437 aaKnown RBP19.75■□□□□ 0.75
SMC4-209ENST00000468653 TFDP2Q14188 446 aa19.75■□□□□ 0.75
SMC4-209ENST00000468653 PPP6R3Q5H9R7 873 aaPredicted RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms