RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 OLFML3Q9NRN5 406 aa4.43□□□□□ -1.7
TMEM39A-204ENST00000468545 OGDHLQ9ULD0 1010 aa4.43□□□□□ -1.7
TMEM39A-204ENST00000468545 ATP11BQ9Y2G3 1177 aa4.43□□□□□ -1.7
TMEM39A-204ENST00000468545 SIT1Q9Y3P8 196 aa4.43□□□□□ -1.7
TMEM39A-204ENST00000468545 TNPO3Q9Y5L0 923 aaKnown RBP4.43□□□□□ -1.7
TMEM39A-204ENST00000468545 CDY2AQ9Y6F7 541 aa4.43□□□□□ -1.7
TMEM39A-204ENST00000468545 ADGRA3Q8IWK6 1321 aa4.43□□□□□ -1.7
TMEM39A-204ENST00000468545 TEX51A0A1B0GUA7 166 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 FSD2A1L4K1 749 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 MBLAC1A4D2B0 266 aaPredicted RBP4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 KCNJ18B7U540 433 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 PDXKO00764 312 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 IKBKBO14920 756 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 HNRNPDLO14979 420 aaKnown RBP4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 B4GALT5O43286 388 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 TGFB1I1O43294 461 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 B4GALT4O60513 344 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 EXOC3O60645 756 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 GPR32O75388 356 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 TADA3O75528 432 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 ERLIN2O94905 339 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 NR3C1P04150 777 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 EDN1P05305 212 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 CKMP06732 381 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 PYGMP11217 842 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 ATP1A3P13637 1013 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 EN2P19622 333 aaPredicted RBP4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 NR2F2P24468 414 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 RPL13P26373 211 aaKnown RBP4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 FLT3P36888 993 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 CASP4P49662 377 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 MRE11P49959 708 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 EFNA5P52803 228 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 UBASH3AP57075 661 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 PTENP60484 403 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 OSTNP61366 133 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 ADAM17P78536 824 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 MRPS6P82932 125 aaKnown RBP4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 SRSF3P84103 164 aaKnown RBP4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 CDC42EP1Q00587 391 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 FKBP3Q00688 224 aaKnown RBP4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 MBTD1Q05BQ5 628 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 NCBP1Q09161 790 aaKnown RBP4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 PRPF4BQ13523 1007 aaKnown RBP4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 ALCAMQ13740 583 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 KCNJ12Q14500 433 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 ZNF460Q14592 562 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 MAPK6Q16659 721 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 FILIP1LQ4L180 1135 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 CT47A1Q5JQC4 288 aaPredicted RBP4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 TCERG1LQ5VWI1 586 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 TTI2Q6NXR4 508 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 ARMCX5Q6P1M9 558 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 TAF2Q6P1X5 1199 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 SLC39A5Q6ZMH5 540 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 C16orf59Q7L2K0 433 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 SRGAP1Q7Z6B7 1085 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 FILIP1Q7Z7B0 1213 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 DDX53Q86TM3 631 aaKnown RBP4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 LRRTM3Q86VH5 581 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 THNSL1Q8IYQ7 743 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 NME8Q8N427 588 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 LINC01465Q8N7H1 131 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 ANKRD20A12PQ8NF67 263 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 UHMK1Q8TAS1 419 aaKnown RBP4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 ANP32BQ92688 251 aaKnown RBP4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 PAWRQ96IZ0 340 aaKnown RBP4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 ACO2Q99798 780 aaKnown RBP4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 CBWD1Q9BRT8 395 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 NTPCRQ9BSD7 190 aaKnown RBP4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 MSTO1Q9BUK6 570 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 STRA6Q9BX79 667 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 KCTD10Q9H3F6 313 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 TMX1Q9H3N1 280 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 SMOC1Q9H4F8 434 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 C11orf49Q9H6J7 331 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 MINDY3Q9H8M7 445 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 AGPAT3Q9NRZ7 376 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 CATSPERZQ9NTU4 200 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 TYW1Q9NV66 732 aaKnown RBP4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 PRMT7Q9NVM4 692 aaPredicted RBP4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 TAB2Q9NYJ8 693 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 HSPBP1Q9NZL4 362 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 IFNKQ9P0W0 207 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 ARHGAP28Q9P2N2 729 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 ANKFY1Q9P2R3 1169 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 MYOTQ9UBF9 498 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 CBLCQ9ULV8 474 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 FRMD4BQ9Y2L6 1034 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 COQ6Q9Y2Z9 468 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 NOC2LQ9Y3T9 749 aaKnown RBP4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 NUB1Q9Y5A7 615 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 PCDHB4Q9Y5E5 795 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 TRPV2Q9Y5S1 764 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 HCFC2Q9Y5Z7 792 aa4.42□□□□□ -1.7
TMEM39A-204ENST00000468545 MYOCOSA0A1B0GUC4 107 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 ACKR2O00590 384 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 N4BP3O15049 544 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 CLDN3O15551 220 aa4.41□□□□□ -1.7
TMEM39A-204ENST00000468545 AP5Z1O43299 807 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms