RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 NPY6RQ99463 290 aa21.48■■□□□ 1.03
TMEM53-207ENST00000468117 NCAPGQ9BPX3 1015 aa21.48■■□□□ 1.03
TMEM53-207ENST00000468117 TRIM51Q9BSJ1 452 aa21.48■■□□□ 1.03
TMEM53-207ENST00000468117 SNRNP25Q9BV90 132 aaKnown RBP21.48■■□□□ 1.03
TMEM53-207ENST00000468117 DCLK3Q9C098 648 aa21.48■■□□□ 1.03
TMEM53-207ENST00000468117 PRKAG2Q9UGJ0 569 aa21.48■■□□□ 1.03
TMEM53-207ENST00000468117 SYNJ2BP-COX16A0A087WUM0 186 aa21.48■■□□□ 1.03
TMEM53-207ENST00000468117 ZBBXA8MT70 800 aa21.48■■□□□ 1.03
TMEM53-207ENST00000468117 H7C4K7 107 aa21.48■■□□□ 1.03
TMEM53-207ENST00000468117 TNFRSF10BO14763 440 aa21.48■■□□□ 1.03
TMEM53-207ENST00000468117 GPR15P49685 360 aa21.48■■□□□ 1.03
TMEM53-207ENST00000468117 CDH6P55285 790 aa21.48■■□□□ 1.03
TMEM53-207ENST00000468117 DHX34Q14147 1143 aaKnown RBP21.48■■□□□ 1.03
TMEM53-207ENST00000468117 DDR2Q16832 855 aa21.48■■□□□ 1.03
TMEM53-207ENST00000468117 USP41Q3LFD5 358 aa21.48■■□□□ 1.03
TMEM53-207ENST00000468117 BADQ92934 168 aa21.48■■□□□ 1.03
TMEM53-207ENST00000468117 PRDM10Q9NQV6 1147 aa21.48■■□□□ 1.03
TMEM53-207ENST00000468117 COX16Q9P0S2 106 aa21.48■■□□□ 1.03
TMEM53-207ENST00000468117 STAP1Q9ULZ2 295 aa21.48■■□□□ 1.03
TMEM53-207ENST00000468117 MRPL42Q9Y6G3 142 aaKnown RBP21.48■■□□□ 1.03
TMEM53-207ENST00000468117 M0QYT0 321 aa21.47■■□□□ 1.03
TMEM53-207ENST00000468117 NCAM1P13591 858 aa21.47■■□□□ 1.03
TMEM53-207ENST00000468117 PTGIRP43119 386 aa21.47■■□□□ 1.03
TMEM53-207ENST00000468117 FNTAP49354 379 aa21.47■■□□□ 1.03
TMEM53-207ENST00000468117 CARSP49589 748 aaKnown RBP21.47■■□□□ 1.03
TMEM53-207ENST00000468117 TAZQ16635 292 aa21.47■■□□□ 1.03
TMEM53-207ENST00000468117 CA9Q16790 459 aa21.47■■□□□ 1.03
TMEM53-207ENST00000468117 VSTM1Q6UX27 236 aa21.47■■□□□ 1.03
TMEM53-207ENST00000468117 RNF168Q8IYW5 571 aaPredicted RBP21.47■■□□□ 1.03
TMEM53-207ENST00000468117 CASKIN2Q8WXE0 1202 aa21.47■■□□□ 1.03
TMEM53-207ENST00000468117 IFT81Q8WYA0 676 aa21.47■■□□□ 1.03
TMEM53-207ENST00000468117 EDEM1Q92611 657 aa21.47■■□□□ 1.03
TMEM53-207ENST00000468117 ZNF558Q96NG5 402 aa21.47■■□□□ 1.03
TMEM53-207ENST00000468117 YME1L1Q96TA2 773 aa21.47■■□□□ 1.03
TMEM53-207ENST00000468117 CDY1Q9Y6F8 540 aa21.47■■□□□ 1.03
TMEM53-207ENST00000468117 GREB1Q4ZG55 1949 aa21.46■■□□□ 1.03
TMEM53-207ENST00000468117 ARSEP51690 589 aa21.46■■□□□ 1.03
TMEM53-207ENST00000468117 DYNLT1P63172 113 aa21.46■■□□□ 1.03
TMEM53-207ENST00000468117 MMRN1Q13201 1228 aa21.46■■□□□ 1.03
TMEM53-207ENST00000468117 GPR17Q13304 367 aa21.46■■□□□ 1.03
TMEM53-207ENST00000468117 BEND6Q5SZJ8 279 aaPredicted RBP21.46■■□□□ 1.03
TMEM53-207ENST00000468117 RNF19BQ6ZMZ0 732 aa21.46■■□□□ 1.03
TMEM53-207ENST00000468117 ZNF365Q70YC5 407 aa21.46■■□□□ 1.03
TMEM53-207ENST00000468117 FAM131BQ86XD5 332 aa21.46■■□□□ 1.03
TMEM53-207ENST00000468117 JAMLQ86YT9 394 aa21.46■■□□□ 1.03
TMEM53-207ENST00000468117 CMTR2Q8IYT2 770 aaKnown RBP21.46■■□□□ 1.03
TMEM53-207ENST00000468117 CCDC185Q8N715 623 aa21.46■■□□□ 1.03
TMEM53-207ENST00000468117 ADAM32Q8TC27 787 aa21.46■■□□□ 1.03
TMEM53-207ENST00000468117 TEKT4Q8WW24 435 aa21.46■■□□□ 1.03
TMEM53-207ENST00000468117 RIN2Q8WYP3 895 aaPredicted RBP21.46■■□□□ 1.03
TMEM53-207ENST00000468117 IRGQQ8WZA9 623 aa21.46■■□□□ 1.03
TMEM53-207ENST00000468117 MTMR11A4FU01 709 aa21.46■■□□□ 1.03
TMEM53-207ENST00000468117 C2CD2LO14523 706 aa21.46■■□□□ 1.03
TMEM53-207ENST00000468117 MDM4O15151 490 aa21.46■■□□□ 1.03
TMEM53-207ENST00000468117 ENDOD1O94919 500 aa21.46■■□□□ 1.03
TMEM53-207ENST00000468117 RPL17P18621 184 aaKnown RBP21.46■■□□□ 1.03
TMEM53-207ENST00000468117 NME3Q13232 169 aa21.46■■□□□ 1.03
TMEM53-207ENST00000468117 DPYSL3Q14195 570 aa21.46■■□□□ 1.03
TMEM53-207ENST00000468117 ERMARDQ5T6L9 678 aa21.46■■□□□ 1.03
TMEM53-207ENST00000468117 BSPRYQ5W0U4 402 aa21.46■■□□□ 1.03
TMEM53-207ENST00000468117 DDX42Q86XP3 938 aaKnown RBP eCLIP21.46■■□□□ 1.03
TMEM53-207ENST00000468117 SCML4Q8N228 414 aa21.46■■□□□ 1.03
TMEM53-207ENST00000468117 SLC7A14Q8TBB6 771 aa21.46■■□□□ 1.03
TMEM53-207ENST00000468117 HAUS1Q96CS2 278 aa21.46■■□□□ 1.03
TMEM53-207ENST00000468117 SLC27A5Q9Y2P5 690 aa21.46■■□□□ 1.03
TMEM53-207ENST00000468117 UTP11Q9Y3A2 253 aaKnown RBP21.46■■□□□ 1.03
TMEM53-207ENST00000468117 CST8O60676 142 aa21.45■■□□□ 1.02
TMEM53-207ENST00000468117 SOAT2O75908 522 aa21.45■■□□□ 1.02
TMEM53-207ENST00000468117 VNN2O95498 520 aa21.45■■□□□ 1.02
TMEM53-207ENST00000468117 TNFRSF8P28908 595 aa21.45■■□□□ 1.02
TMEM53-207ENST00000468117 KRT81Q14533 505 aa21.45■■□□□ 1.02
TMEM53-207ENST00000468117 CCNG2Q16589 344 aa21.45■■□□□ 1.02
TMEM53-207ENST00000468117 KIAA1841Q6NSI8 718 aa21.45■■□□□ 1.02
TMEM53-207ENST00000468117 BNIPLQ7Z465 357 aa21.45■■□□□ 1.02
TMEM53-207ENST00000468117 SLC39A11Q8N1S5 342 aa21.45■■□□□ 1.02
TMEM53-207ENST00000468117 FBXO22Q8NEZ5 403 aa21.45■■□□□ 1.02
TMEM53-207ENST00000468117 MAGEB5Q9BZ81 275 aa21.45■■□□□ 1.02
TMEM53-207ENST00000468117 TRIM31Q9BZY9 425 aa21.45■■□□□ 1.02
TMEM53-207ENST00000468117 CRISPLD1Q9H336 500 aa21.45■■□□□ 1.02
TMEM53-207ENST00000468117 EFR3BQ9Y2G0 817 aa21.45■■□□□ 1.02
TMEM53-207ENST00000468117 BHMG1C9JSJ3 638 aaPredicted RBP21.45■■□□□ 1.02
TMEM53-207ENST00000468117 TRIM66O15016 1216 aa21.45■■□□□ 1.02
TMEM53-207ENST00000468117 ADAM12O43184 909 aa21.45■■□□□ 1.02
TMEM53-207ENST00000468117 FGBP02675 491 aa21.45■■□□□ 1.02
TMEM53-207ENST00000468117 MAGEA11P43364 429 aa21.45■■□□□ 1.02
TMEM53-207ENST00000468117 FPGSQ05932 587 aa21.45■■□□□ 1.02
TMEM53-207ENST00000468117 PPIGQ13427 754 aaKnown RBP eCLIP21.45■■□□□ 1.02
TMEM53-207ENST00000468117 PSMD5Q16401 504 aa21.45■■□□□ 1.02
TMEM53-207ENST00000468117 COLGALT1Q8NBJ5 622 aa21.45■■□□□ 1.02
TMEM53-207ENST00000468117 GPR152Q8TDT2 470 aa21.45■■□□□ 1.02
TMEM53-207ENST00000468117 TMEM169Q96HH4 297 aa21.45■■□□□ 1.02
TMEM53-207ENST00000468117 C8orf48Q96LL4 319 aa21.45■■□□□ 1.02
TMEM53-207ENST00000468117 HOMER3Q9NSC5 361 aa21.45■■□□□ 1.02
TMEM53-207ENST00000468117 PIGVQ9NUD9 493 aa21.45■■□□□ 1.02
TMEM53-207ENST00000468117 SAE1Q9UBE0 346 aaPredicted RBP21.45■■□□□ 1.02
TMEM53-207ENST00000468117 NFU1Q9UMS0 254 aa21.45■■□□□ 1.02
TMEM53-207ENST00000468117 COL4A4P53420 1690 aaPredicted RBP21.44■■□□□ 1.02
TMEM53-207ENST00000468117 PLXNA3P51805 1871 aa21.44■■□□□ 1.02
TMEM53-207ENST00000468117 FAM187AA6NFU0 413 aa21.44■■□□□ 1.02
TMEM53-207ENST00000468117 RDXP35241 583 aaKnown RBP21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms