RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 GALCP54803 685 aa15.93■□□□□ 0.14
SNIP1-202ENST00000468040 KRT83P78385 493 aa15.93■□□□□ 0.14
SNIP1-202ENST00000468040 CYP4F8P98187 520 aa15.93■□□□□ 0.14
SNIP1-202ENST00000468040 MTF1Q14872 753 aa15.93■□□□□ 0.14
SNIP1-202ENST00000468040 AAK1Q2M2I8 961 aa15.93■□□□□ 0.14
SNIP1-202ENST00000468040 GPR158Q5T848 1215 aa15.93■□□□□ 0.14
SNIP1-202ENST00000468040 KLHDC10Q6PID8 442 aa15.93■□□□□ 0.14
SNIP1-202ENST00000468040 RSRC2Q7L4I2 434 aaKnown RBP15.93■□□□□ 0.14
SNIP1-202ENST00000468040 ARCQ7LC44 396 aa15.93■□□□□ 0.14
SNIP1-202ENST00000468040 ITFG1Q8TB96 612 aa15.93■□□□□ 0.14
SNIP1-202ENST00000468040 RNF139Q8WU17 664 aa15.93■□□□□ 0.14
SNIP1-202ENST00000468040 CTNNBL1Q8WYA6 563 aaPredicted RBP15.93■□□□□ 0.14
SNIP1-202ENST00000468040 PIWIL1Q96J94 861 aaKnown RBP15.93■□□□□ 0.14
SNIP1-202ENST00000468040 SELENOOQ9BVL4 669 aa15.93■□□□□ 0.14
SNIP1-202ENST00000468040 NACA2Q9H009 215 aa15.93■□□□□ 0.14
SNIP1-202ENST00000468040 POMKQ9H5K3 350 aa15.93■□□□□ 0.14
SNIP1-202ENST00000468040 SLITRK6Q9H5Y7 841 aa15.93■□□□□ 0.14
SNIP1-202ENST00000468040 TASP1Q9H6P5 420 aa15.93■□□□□ 0.14
SNIP1-202ENST00000468040 MRPL47Q9HD33 250 aaKnown RBP15.93■□□□□ 0.14
SNIP1-202ENST00000468040 OLA1Q9NTK5 396 aaKnown RBP15.93■□□□□ 0.14
SNIP1-202ENST00000468040 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.93■□□□□ 0.14
SNIP1-202ENST00000468040 GDE1Q9NZC3 331 aa15.93■□□□□ 0.14
SNIP1-202ENST00000468040 CNOT8Q9UFF9 292 aaKnown RBP15.93■□□□□ 0.14
SNIP1-202ENST00000468040 ZFP37Q9Y6Q3 630 aaPredicted RBP15.93■□□□□ 0.14
SNIP1-202ENST00000468040 SCINQ9Y6U3 715 aa15.93■□□□□ 0.14
SNIP1-202ENST00000468040 OBSL1O75147 1896 aa15.93■□□□□ 0.14
SNIP1-202ENST00000468040 REV3LO60673 3130 aa15.92■□□□□ 0.14
SNIP1-202ENST00000468040 NOTCH4Q99466 2003 aa15.92■□□□□ 0.14
SNIP1-202ENST00000468040 TRAV19A0A0A6YYK7 116 aa15.92■□□□□ 0.14
SNIP1-202ENST00000468040 SIGLEC16A6NMB1 481 aa15.92■□□□□ 0.14
SNIP1-202ENST00000468040 CAPN9O14815 690 aa15.92■□□□□ 0.14
SNIP1-202ENST00000468040 OAS1P00973 400 aaKnown RBP15.92■□□□□ 0.14
SNIP1-202ENST00000468040 KRT3P12035 628 aa15.92■□□□□ 0.14
SNIP1-202ENST00000468040 NCAM1P13591 858 aa15.92■□□□□ 0.14
SNIP1-202ENST00000468040 RARGP13631 454 aa15.92■□□□□ 0.14
SNIP1-202ENST00000468040 CEBPBP17676 345 aa15.92■□□□□ 0.14
SNIP1-202ENST00000468040 MAGEA1P43355 309 aa15.92■□□□□ 0.14
SNIP1-202ENST00000468040 PGFP49763 221 aa15.92■□□□□ 0.14
SNIP1-202ENST00000468040 GPC5P78333 572 aa15.92■□□□□ 0.14
SNIP1-202ENST00000468040 CCZ1BP86790 482 aa15.92■□□□□ 0.14
SNIP1-202ENST00000468040 CCZ1P86791 482 aaPredicted RBP15.92■□□□□ 0.14
SNIP1-202ENST00000468040 PLEKHA7Q6IQ23 1121 aa15.92■□□□□ 0.14
SNIP1-202ENST00000468040 HFE2Q6ZVN8 426 aa15.92■□□□□ 0.14
SNIP1-202ENST00000468040 DNAAF5Q86Y56 855 aa15.92■□□□□ 0.14
SNIP1-202ENST00000468040 NPAS3Q8IXF0 933 aa15.92■□□□□ 0.14
SNIP1-202ENST00000468040 TXLNBQ8N3L3 684 aa15.92■□□□□ 0.14
SNIP1-202ENST00000468040 ING5Q8WYH8 240 aa15.92■□□□□ 0.14
SNIP1-202ENST00000468040 FGF13Q92913 245 aa15.92■□□□□ 0.14
SNIP1-202ENST00000468040 SLC2A13Q96QE2 648 aa15.92■□□□□ 0.14
SNIP1-202ENST00000468040 THAP2Q9H0W7 228 aa15.92■□□□□ 0.14
SNIP1-202ENST00000468040 TRPC7Q9HCX4 862 aa15.92■□□□□ 0.14
SNIP1-202ENST00000468040 METTL5Q9NRN9 209 aaKnown RBP15.92■□□□□ 0.14
SNIP1-202ENST00000468040 OSER1Q9NX31 292 aa15.92■□□□□ 0.14
SNIP1-202ENST00000468040 THEGQ9P2T0 379 aa15.92■□□□□ 0.14
SNIP1-202ENST00000468040 CDH7Q9ULB5 785 aa15.92■□□□□ 0.14
SNIP1-202ENST00000468040 PCDHA13Q9Y5I0 950 aa15.92■□□□□ 0.14
SNIP1-202ENST00000468040 DENND4AQ7Z401 1863 aa15.92■□□□□ 0.14
SNIP1-202ENST00000468040 TCRBV5S1A1TA0A578 114 aa15.91■□□□□ 0.14
SNIP1-202ENST00000468040 C2orf78A6NCI8 922 aa15.91■□□□□ 0.14
SNIP1-202ENST00000468040 DAB1O75553 588 aa15.91■□□□□ 0.14
SNIP1-202ENST00000468040 OLFM2O95897 454 aa15.91■□□□□ 0.14
SNIP1-202ENST00000468040 HDCP19113 662 aa15.91■□□□□ 0.14
SNIP1-202ENST00000468040 ATP5C1P36542 298 aaKnown RBP15.91■□□□□ 0.14
SNIP1-202ENST00000468040 RNASE9P60153 205 aaKnown RBP15.91■□□□□ 0.14
SNIP1-202ENST00000468040 MAMLD1Q13495 774 aa15.91■□□□□ 0.14
SNIP1-202ENST00000468040 TAF5Q15542 800 aa15.91■□□□□ 0.14
SNIP1-202ENST00000468040 SMAD2Q15796 467 aaKnown RBP15.91■□□□□ 0.14
SNIP1-202ENST00000468040 C10orf120Q5SQS8 335 aa15.91■□□□□ 0.14
SNIP1-202ENST00000468040 TXNDC8Q6A555 127 aa15.91■□□□□ 0.14
SNIP1-202ENST00000468040 PTCRAQ6ISU1 281 aaPredicted RBP15.91■□□□□ 0.14
SNIP1-202ENST00000468040 DCUN1D2Q6PH85 259 aa15.91■□□□□ 0.14
SNIP1-202ENST00000468040 OTOP3Q7RTS5 596 aa15.91■□□□□ 0.14
SNIP1-202ENST00000468040 PHLDB2Q86SQ0 1253 aa15.91■□□□□ 0.14
SNIP1-202ENST00000468040 MAB21L3Q8N8X9 362 aa15.91■□□□□ 0.14
SNIP1-202ENST00000468040 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.91■□□□□ 0.14
SNIP1-202ENST00000468040 EDEM1Q92611 657 aa15.91■□□□□ 0.14
SNIP1-202ENST00000468040 KHSRPQ92945 711 aaKnown RBP eCLIP15.91■□□□□ 0.144e-7■■□□□ 13.1
SNIP1-202ENST00000468040 SLC46A2Q9BY10 475 aa15.91■□□□□ 0.14
SNIP1-202ENST00000468040 CCSER2Q9H7U1 834 aa15.91■□□□□ 0.14
SNIP1-202ENST00000468040 RRN3Q9NYV6 651 aa15.91■□□□□ 0.14
SNIP1-202ENST00000468040 MYO1AQ9UBC5 1043 aa15.91■□□□□ 0.14
SNIP1-202ENST00000468040 DNMT3LQ9UJW3 386 aa15.91■□□□□ 0.14
SNIP1-202ENST00000468040 TMEM59LQ9UK28 342 aa15.91■□□□□ 0.14
SNIP1-202ENST00000468040 USTQ9Y2C2 406 aa15.91■□□□□ 0.14
SNIP1-202ENST00000468040 DOCK6Q96HP0 2047 aa15.9■□□□□ 0.14
SNIP1-202ENST00000468040 DENND4CQ5VZ89 1909 aa15.9■□□□□ 0.14
SNIP1-202ENST00000468040 NRG2O14511 850 aaPredicted RBP15.9■□□□□ 0.14
SNIP1-202ENST00000468040 ATMINO43313 823 aaPredicted RBP15.9■□□□□ 0.14
SNIP1-202ENST00000468040 COCHO43405 550 aa15.9■□□□□ 0.14
SNIP1-202ENST00000468040 GRAP2O75791 330 aa15.9■□□□□ 0.14
SNIP1-202ENST00000468040 CYP1A2P05177 515 aa15.9■□□□□ 0.14
SNIP1-202ENST00000468040 FYNP06241 537 aa15.9■□□□□ 0.14
SNIP1-202ENST00000468040 CKMP06732 381 aa15.9■□□□□ 0.14
SNIP1-202ENST00000468040 WEE1P30291 646 aa15.9■□□□□ 0.14
SNIP1-202ENST00000468040 NOS2P35228 1153 aa15.9■□□□□ 0.14
SNIP1-202ENST00000468040 AVPR1AP37288 418 aa15.9■□□□□ 0.14
SNIP1-202ENST00000468040 MATKP42679 507 aa15.9■□□□□ 0.14
SNIP1-202ENST00000468040 TFF2Q03403 129 aa15.9■□□□□ 0.14
SNIP1-202ENST00000468040 DCAF6Q58WW2 860 aa15.9■□□□□ 0.14
SNIP1-202ENST00000468040 PPP1R15BQ5SWA1 713 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms