RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	PTK6	Q13882	451 aa		12.83	□□□□□ -0.36
HDLBP-231	ENST00000467435	DPYSL3	Q14195	570 aa		12.83	□□□□□ -0.36
HDLBP-231	ENST00000467435	PDK2	Q15119	407 aa		12.83	□□□□□ -0.36
HDLBP-231	ENST00000467435	NFE2	Q16621	373 aa	Predicted RBP	12.83	□□□□□ -0.36
HDLBP-231	ENST00000467435	ZC3H12A	Q5D1E8	599 aa	Known RBP	12.83	□□□□□ -0.36
HDLBP-231	ENST00000467435	BHLHA9	Q7RTU4	235 aa		12.83	□□□□□ -0.36
HDLBP-231	ENST00000467435	TMEM173	Q86WV6	379 aa	Predicted RBP	12.83	□□□□□ -0.36
HDLBP-231	ENST00000467435	MAP7D3	Q8IWC1	876 aa		12.83	□□□□□ -0.36
HDLBP-231	ENST00000467435	SCML4	Q8N228	414 aa		12.83	□□□□□ -0.36
HDLBP-231	ENST00000467435	IRGQ	Q8WZA9	623 aa		12.83	□□□□□ -0.36
HDLBP-231	ENST00000467435	B3GALT6	Q96L58	329 aa		12.83	□□□□□ -0.36
HDLBP-231	ENST00000467435	NPY6R	Q99463	290 aa		12.83	□□□□□ -0.36
HDLBP-231	ENST00000467435	TMEM106C	Q9BVX2	250 aa		12.83	□□□□□ -0.36
HDLBP-231	ENST00000467435	NEUROG2	Q9H2A3	272 aa		12.83	□□□□□ -0.36
HDLBP-231	ENST00000467435	AP4E1	Q9UPM8	1137 aa		12.83	□□□□□ -0.36
HDLBP-231	ENST00000467435	SNX24	Q9Y343	169 aa		12.83	□□□□□ -0.36
HDLBP-231	ENST00000467435	GREB1	Q4ZG55	1949 aa		12.83	□□□□□ -0.36
HDLBP-231	ENST00000467435	TRIM43B	A6NCK2	446 aa		12.82	□□□□□ -0.36
HDLBP-231	ENST00000467435		M0QYT0	321 aa		12.82	□□□□□ -0.36
HDLBP-231	ENST00000467435	KIAA0355	O15063	1070 aa		12.82	□□□□□ -0.36
HDLBP-231	ENST00000467435	DGKI	O75912	1065 aa		12.82	□□□□□ -0.36
HDLBP-231	ENST00000467435	AMH	P03971	560 aa		12.82	□□□□□ -0.36
HDLBP-231	ENST00000467435	FAM153B	P0C7A2	387 aa		12.82	□□□□□ -0.36
HDLBP-231	ENST00000467435	CYP2F1	P24903	491 aa		12.82	□□□□□ -0.36
HDLBP-231	ENST00000467435	GBP1	P32455	592 aa		12.82	□□□□□ -0.36
HDLBP-231	ENST00000467435	RPL21	P46778	160 aa	Known RBP	12.82	□□□□□ -0.36
HDLBP-231	ENST00000467435	SLC5A3	P53794	718 aa		12.82	□□□□□ -0.36
HDLBP-231	ENST00000467435	DRG2	P55039	364 aa	Known RBP	12.82	□□□□□ -0.36
HDLBP-231	ENST00000467435	PITX1	P78337	314 aa	Predicted RBP	12.82	□□□□□ -0.36
HDLBP-231	ENST00000467435	MMRN1	Q13201	1228 aa		12.82	□□□□□ -0.36
HDLBP-231	ENST00000467435	TFDP2	Q14188	446 aa		12.82	□□□□□ -0.36
HDLBP-231	ENST00000467435	MRPL58	Q14197	206 aa	Known RBP	12.82	□□□□□ -0.36
HDLBP-231	ENST00000467435	CA9	Q16790	459 aa		12.82	□□□□□ -0.36
HDLBP-231	ENST00000467435	FAM153C	Q494X1	144 aa		12.82	□□□□□ -0.36
HDLBP-231	ENST00000467435	ERMARD	Q5T6L9	678 aa		12.82	□□□□□ -0.36
HDLBP-231	ENST00000467435	SYPL2	Q5VXT5	272 aa		12.82	□□□□□ -0.36
HDLBP-231	ENST00000467435	DRICH1	Q6PGQ1	229 aa	Predicted RBP	12.82	□□□□□ -0.36
HDLBP-231	ENST00000467435	BNIPL	Q7Z465	357 aa		12.82	□□□□□ -0.36
HDLBP-231	ENST00000467435	VSIG1	Q86XK7	387 aa		12.82	□□□□□ -0.36
HDLBP-231	ENST00000467435	CCDC185	Q8N715	623 aa		12.82	□□□□□ -0.36
HDLBP-231	ENST00000467435	TTC13	Q8NBP0	860 aa		12.82	□□□□□ -0.36
HDLBP-231	ENST00000467435	ATL2	Q8NHH9	583 aa		12.82	□□□□□ -0.36
HDLBP-231	ENST00000467435	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	12.82	□□□□□ -0.36
HDLBP-231	ENST00000467435	BCL7C	Q8WUZ0	217 aa	Predicted RBP	12.82	□□□□□ -0.36
HDLBP-231	ENST00000467435	NT5C3B	Q969T7	300 aa		12.82	□□□□□ -0.36
HDLBP-231	ENST00000467435	TRIM43	Q96BQ3	446 aa	Predicted RBP	12.82	□□□□□ -0.36
HDLBP-231	ENST00000467435	FUBP3	Q96I24	572 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
HDLBP-231	ENST00000467435	ZNF670	Q9BS34	389 aa		12.82	□□□□□ -0.36
HDLBP-231	ENST00000467435	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	12.82	□□□□□ -0.36
HDLBP-231	ENST00000467435	ACBD3	Q9H3P7	528 aa		12.82	□□□□□ -0.36
HDLBP-231	ENST00000467435	CWH43	Q9H720	699 aa		12.82	□□□□□ -0.36
HDLBP-231	ENST00000467435	VIPAS39	Q9H9C1	493 aa		12.82	□□□□□ -0.36
HDLBP-231	ENST00000467435	PCDH18	Q9HCL0	1135 aa		12.82	□□□□□ -0.36
HDLBP-231	ENST00000467435	CALCOCO1	Q9P1Z2	691 aa		12.82	□□□□□ -0.36
HDLBP-231	ENST00000467435	ASIC3	Q9UHC3	531 aa		12.82	□□□□□ -0.36
HDLBP-231	ENST00000467435	FAM153A	Q9UHL3	310 aa		12.82	□□□□□ -0.36
HDLBP-231	ENST00000467435	FEZ2	Q9UHY8	353 aa	Predicted RBP	12.82	□□□□□ -0.36
HDLBP-231	ENST00000467435	DNPEP	Q9ULA0	475 aa		12.82	□□□□□ -0.36
HDLBP-231	ENST00000467435	HPCAL4	Q9UM19	191 aa		12.82	□□□□□ -0.36
HDLBP-231	ENST00000467435	NAALADL1	Q9UQQ1	740 aa		12.82	□□□□□ -0.36
HDLBP-231	ENST00000467435	PCDHB5	Q9Y5E4	795 aa		12.82	□□□□□ -0.36
HDLBP-231	ENST00000467435	SYNJ2BP-COX16	A0A087WUM0	186 aa		12.81	□□□□□ -0.36
HDLBP-231	ENST00000467435		H7C4K7	107 aa		12.81	□□□□□ -0.36
HDLBP-231	ENST00000467435	APOC4-APOC2	K7ER74	178 aa		12.81	□□□□□ -0.36
HDLBP-231	ENST00000467435	TRIM66	O15016	1216 aa		12.81	□□□□□ -0.36
HDLBP-231	ENST00000467435	APOC2	P02655	101 aa		12.81	□□□□□ -0.36
HDLBP-231	ENST00000467435	FYN	P06241	537 aa		12.81	□□□□□ -0.36
HDLBP-231	ENST00000467435	NCAM1	P13591	858 aa		12.81	□□□□□ -0.36
HDLBP-231	ENST00000467435	CPB1	P15086	417 aa		12.81	□□□□□ -0.36
HDLBP-231	ENST00000467435	CSF2RA	P15509	400 aa		12.81	□□□□□ -0.36
HDLBP-231	ENST00000467435	RAG1	P15918	1043 aa		12.81	□□□□□ -0.36
HDLBP-231	ENST00000467435	CAPN2	P17655	700 aa		12.81	□□□□□ -0.36
HDLBP-231	ENST00000467435	ITGB8	P26012	769 aa		12.81	□□□□□ -0.36
HDLBP-231	ENST00000467435	VCP	P55072	806 aa	Known RBP	12.81	□□□□□ -0.36
HDLBP-231	ENST00000467435	DEFB103A	P81534	67 aa		12.81	□□□□□ -0.36
HDLBP-231	ENST00000467435	OTUD4	Q01804	1114 aa	Known RBP	12.81	□□□□□ -0.36
HDLBP-231	ENST00000467435	LMNB2	Q03252	620 aa		12.81	□□□□□ -0.36
HDLBP-231	ENST00000467435	DEUP1	Q05D60	604 aa		12.81	□□□□□ -0.36
HDLBP-231	ENST00000467435	IFRD2	Q12894	506 aa	Predicted RBP	12.81	□□□□□ -0.36
HDLBP-231	ENST00000467435	BYSL	Q13895	437 aa	Known RBP	12.81	□□□□□ -0.36
HDLBP-231	ENST00000467435	DPYSL2	Q16555	572 aa		12.81	□□□□□ -0.36
HDLBP-231	ENST00000467435	PPP6R3	Q5H9R7	873 aa	Predicted RBP	12.81	□□□□□ -0.36
HDLBP-231	ENST00000467435	RTP2	Q5QGT7	225 aa		12.81	□□□□□ -0.36
HDLBP-231	ENST00000467435	PM20D1	Q6GTS8	502 aa		12.81	□□□□□ -0.36
HDLBP-231	ENST00000467435	ZDHHC24	Q6UX98	284 aa		12.81	□□□□□ -0.36
HDLBP-231	ENST00000467435	ZNF365	Q70YC5	407 aa		12.81	□□□□□ -0.36
HDLBP-231	ENST00000467435	GSTA5	Q7RTV2	222 aa		12.81	□□□□□ -0.36
HDLBP-231	ENST00000467435	FAM131B	Q86XD5	332 aa		12.81	□□□□□ -0.36
HDLBP-231	ENST00000467435	SCN4B	Q8IWT1	228 aa		12.81	□□□□□ -0.36
HDLBP-231	ENST00000467435	TMEM199	Q8N511	208 aa		12.81	□□□□□ -0.36
HDLBP-231	ENST00000467435	SLC7A14	Q8TBB6	771 aa		12.81	□□□□□ -0.36
HDLBP-231	ENST00000467435	FAM71B	Q8TC56	605 aa		12.81	□□□□□ -0.36
HDLBP-231	ENST00000467435	ACTL9	Q8TC94	416 aa		12.81	□□□□□ -0.36
HDLBP-231	ENST00000467435	NKD2	Q969F2	451 aa	Predicted RBP	12.81	□□□□□ -0.36
HDLBP-231	ENST00000467435	PGLYRP2	Q96PD5	576 aa		12.81	□□□□□ -0.36
HDLBP-231	ENST00000467435	TRIM62	Q9BVG3	475 aa		12.81	□□□□□ -0.36
HDLBP-231	ENST00000467435	MAK16	Q9BXY0	300 aa	Known RBP	12.81	□□□□□ -0.36
HDLBP-231	ENST00000467435	DHX35	Q9H5Z1	703 aa	Known RBP	12.81	□□□□□ -0.36
HDLBP-231	ENST00000467435	FAM204A	Q9H8W3	233 aa		12.81	□□□□□ -0.36
HDLBP-231	ENST00000467435	FAM53C	Q9NYF3	392 aa		12.81	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms