RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 GUF1Q8N442 669 aaKnown RBP20.23■□□□□ 0.83
COL9A3-206ENST00000466532 CYFIP2Q96F07 1278 aa20.23■□□□□ 0.83
COL9A3-206ENST00000466532 NT5C1AQ9BXI3 368 aa20.23■□□□□ 0.83
COL9A3-206ENST00000466532 CYP3A43Q9HB55 503 aa20.23■□□□□ 0.83
COL9A3-206ENST00000466532 DEC1Q9P2X7 70 aa20.23■□□□□ 0.83
COL9A3-206ENST00000466532 ADAMTS9Q9P2N4 1935 aa20.22■□□□□ 0.83
COL9A3-206ENST00000466532 A0A1W2PQ27 194 aa20.22■□□□□ 0.83
COL9A3-206ENST00000466532 A0A1W2PQ64 194 aa20.22■□□□□ 0.83
COL9A3-206ENST00000466532 A0A1W2PQD8 194 aa20.22■□□□□ 0.83
COL9A3-206ENST00000466532 TBC1D3BA6NDS4 549 aa20.22■□□□□ 0.83
COL9A3-206ENST00000466532 TM4SF5O14894 197 aa20.22■□□□□ 0.83
COL9A3-206ENST00000466532 CYP26A1O43174 497 aa20.22■□□□□ 0.83
COL9A3-206ENST00000466532 TBX18O95935 607 aa20.22■□□□□ 0.83
COL9A3-206ENST00000466532 CD58P19256 250 aa20.22■□□□□ 0.83
COL9A3-206ENST00000466532 ATP5C1P36542 298 aaKnown RBP20.22■□□□□ 0.83
COL9A3-206ENST00000466532 ADAM9Q13443 819 aa20.22■□□□□ 0.83
COL9A3-206ENST00000466532 PREPLQ4J6C6 727 aaPredicted RBP20.22■□□□□ 0.83
COL9A3-206ENST00000466532 TMEM25Q86YD3 366 aa20.22■□□□□ 0.83
COL9A3-206ENST00000466532 CCDC150Q8NCX0 1101 aa20.22■□□□□ 0.83
COL9A3-206ENST00000466532 OLIG1Q8TAK6 271 aa20.22■□□□□ 0.83
COL9A3-206ENST00000466532 WHAMMQ8TF30 809 aa20.22■□□□□ 0.83
COL9A3-206ENST00000466532 EDEM2Q9BV94 578 aa20.22■□□□□ 0.83
COL9A3-206ENST00000466532 KLF16Q9BXK1 252 aaPredicted RBP20.22■□□□□ 0.83
COL9A3-206ENST00000466532 NIF3L1Q9GZT8 377 aa20.22■□□□□ 0.83
COL9A3-206ENST00000466532 SCAND2PQ9GZW5 306 aaPredicted RBP20.22■□□□□ 0.83
COL9A3-206ENST00000466532 GOLPH3LQ9H4A5 285 aa20.22■□□□□ 0.83
COL9A3-206ENST00000466532 CYLDQ9NQC7 956 aa20.22■□□□□ 0.83
COL9A3-206ENST00000466532 OSER1Q9NX31 292 aa20.22■□□□□ 0.83
COL9A3-206ENST00000466532 BCCIPQ9P287 314 aaKnown RBP eCLIP20.22■□□□□ 0.83
COL9A3-206ENST00000466532 CIZ1Q9ULV3 898 aaPredicted RBP20.22■□□□□ 0.83
COL9A3-206ENST00000466532 SCML2Q9UQR0 700 aa20.22■□□□□ 0.83
COL9A3-206ENST00000466532 ATP6V1DQ9Y5K8 247 aa20.22■□□□□ 0.83
COL9A3-206ENST00000466532 HHLA1C9JL84 531 aa20.21■□□□□ 0.83
COL9A3-206ENST00000466532 CILPO75339 1184 aa20.21■□□□□ 0.83
COL9A3-206ENST00000466532 ACO1P21399 889 aaKnown RBP20.21■□□□□ 0.83
COL9A3-206ENST00000466532 ENPEPQ07075 957 aa20.21■□□□□ 0.83
COL9A3-206ENST00000466532 GOLGA8FQ08AF8 430 aa20.21■□□□□ 0.83
COL9A3-206ENST00000466532 GOLGA8DPQ0D2H9 430 aa20.21■□□□□ 0.83
COL9A3-206ENST00000466532 HTR3DQ70Z44 454 aa20.21■□□□□ 0.83
COL9A3-206ENST00000466532 CYP2U1Q7Z449 544 aa20.21■□□□□ 0.83
COL9A3-206ENST00000466532 RLN3Q8WXF3 142 aa20.21■□□□□ 0.83
COL9A3-206ENST00000466532 DNAI2Q9GZS0 605 aa20.21■□□□□ 0.83
COL9A3-206ENST00000466532 NMUR1Q9HB89 426 aa20.21■□□□□ 0.83
COL9A3-206ENST00000466532 TMEM8AQ9HCN3 771 aa20.21■□□□□ 0.83
COL9A3-206ENST00000466532 PCDHA5Q9Y5H7 936 aa20.21■□□□□ 0.83
COL9A3-206ENST00000466532 TPRP12270 2363 aaKnown RBP20.2■□□□□ 0.82
COL9A3-206ENST00000466532 TCRBV21S2A2A0A5A6 115 aa20.2■□□□□ 0.82
COL9A3-206ENST00000466532 GREM1O60565 184 aa20.2■□□□□ 0.82
COL9A3-206ENST00000466532 ADAM23O75077 832 aa20.2■□□□□ 0.82
COL9A3-206ENST00000466532 ZNF202O95125 648 aa20.2■□□□□ 0.82
COL9A3-206ENST00000466532 P2RY2P41231 377 aa20.2■□□□□ 0.82
COL9A3-206ENST00000466532 DHPSP49366 369 aaPredicted RBP20.2■□□□□ 0.82
COL9A3-206ENST00000466532 ZCWPW2Q504Y3 356 aa20.2■□□□□ 0.82
COL9A3-206ENST00000466532 C10orf76Q5T2E6 689 aa20.2■□□□□ 0.82
COL9A3-206ENST00000466532 NUDT18Q6ZVK8 323 aa20.2■□□□□ 0.82
COL9A3-206ENST00000466532 ZNF513Q8N8E2 541 aaPredicted RBP20.2■□□□□ 0.82
COL9A3-206ENST00000466532 TERB1Q8NA31 727 aa20.2■□□□□ 0.82
COL9A3-206ENST00000466532 HMGB4Q8WW32 186 aa20.2■□□□□ 0.82
COL9A3-206ENST00000466532 SPACA7Q96KW9 195 aa20.2■□□□□ 0.82
COL9A3-206ENST00000466532 PNPLA8Q9NP80 782 aa20.2■□□□□ 0.82
COL9A3-206ENST00000466532 LSM7Q9UK45 103 aaKnown RBP20.2■□□□□ 0.82
COL9A3-206ENST00000466532 A0A1W2PQH9 124 aa20.19■□□□□ 0.82
COL9A3-206ENST00000466532 NEDD8-MDP1E9PL57 170 aa20.19■□□□□ 0.82
COL9A3-206ENST00000466532 TRIM24O15164 1050 aa20.19■□□□□ 0.82
COL9A3-206ENST00000466532 MAP3K13O43283 966 aa20.19■□□□□ 0.82
COL9A3-206ENST00000466532 RARGP13631 454 aa20.19■□□□□ 0.82
COL9A3-206ENST00000466532 KRT39Q6A163 491 aa20.19■□□□□ 0.82
COL9A3-206ENST00000466532 GRAMD4Q6IC98 578 aa20.19■□□□□ 0.82
COL9A3-206ENST00000466532 TRMT11Q7Z4G4 463 aaKnown RBP20.19■□□□□ 0.82
COL9A3-206ENST00000466532 PGBD3Q8N328 593 aa20.19■□□□□ 0.82
COL9A3-206ENST00000466532 KCNV2Q8TDN2 545 aa20.19■□□□□ 0.82
COL9A3-206ENST00000466532 LSM14BQ9BX40 385 aaKnown RBP20.19■□□□□ 0.82
COL9A3-206ENST00000466532 BBS2Q9BXC9 721 aa20.19■□□□□ 0.82
COL9A3-206ENST00000466532 DNAJC17Q9NVM6 304 aaKnown RBP20.19■□□□□ 0.82
COL9A3-206ENST00000466532 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.19■□□□□ 0.82
COL9A3-206ENST00000466532 NUDT5Q9UKK9 219 aa20.19■□□□□ 0.82
COL9A3-206ENST00000466532 ACACBO00763 2458 aa20.18■□□□□ 0.82
COL9A3-206ENST00000466532 LNP1A1A4G5 178 aa20.18■□□□□ 0.82
COL9A3-206ENST00000466532 KHNYNO15037 678 aaKnown RBP20.18■□□□□ 0.82
COL9A3-206ENST00000466532 MDM4O15151 490 aa20.18■□□□□ 0.82
COL9A3-206ENST00000466532 GTF2H1P32780 548 aa20.18■□□□□ 0.82
COL9A3-206ENST00000466532 EDRF1Q3B7T1 1238 aa20.18■□□□□ 0.82
COL9A3-206ENST00000466532 ZNF394Q53GI3 561 aa20.18■□□□□ 0.82
COL9A3-206ENST00000466532 PPP1R26Q5T8A7 1209 aaPredicted RBP20.18■□□□□ 0.82
COL9A3-206ENST00000466532 N4BP2L1Q5TBK1 243 aaPredicted RBP20.18■□□□□ 0.82
COL9A3-206ENST00000466532 TPGS1Q6ZTW0 290 aa20.18■□□□□ 0.82
COL9A3-206ENST00000466532 LPCAT2Q7L5N7 544 aa20.18■□□□□ 0.82
COL9A3-206ENST00000466532 SMYD4Q8IYR2 804 aaPredicted RBP20.18■□□□□ 0.82
COL9A3-206ENST00000466532 FRMD1Q8N878 549 aa20.18■□□□□ 0.82
COL9A3-206ENST00000466532 CCDC34Q96HJ3 373 aa20.18■□□□□ 0.82
COL9A3-206ENST00000466532 XPO6Q96QU8 1125 aaKnown RBP20.18■□□□□ 0.82
COL9A3-206ENST00000466532 DUSP16Q9BY84 665 aa20.18■□□□□ 0.82
COL9A3-206ENST00000466532 GDPD2Q9HCC8 539 aa20.18■□□□□ 0.82
COL9A3-206ENST00000466532 NAGPAQ9UK23 515 aa20.18■□□□□ 0.82
COL9A3-206ENST00000466532 PATE3B3GLJ2 98 aa20.17■□□□□ 0.82
COL9A3-206ENST00000466532 CACNG3O60359 315 aa20.17■□□□□ 0.82
COL9A3-206ENST00000466532 HOXB2P14652 356 aa20.17■□□□□ 0.82
COL9A3-206ENST00000466532 TYRP14679 529 aa20.17■□□□□ 0.82
COL9A3-206ENST00000466532 MXI1P50539 228 aa20.17■□□□□ 0.82
COL9A3-206ENST00000466532 KIF11P52732 1056 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms