RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 PLEKHA4Q9H4M7 779 aa19.47■□□□□ 0.71
CAPN3-209ENST00000466222 TMEM51Q9NW97 253 aa19.47■□□□□ 0.71
CAPN3-209ENST00000466222 MTUS1Q9ULD2 1270 aa19.47■□□□□ 0.71
CAPN3-209ENST00000466222 USTQ9Y2C2 406 aa19.47■□□□□ 0.71
CAPN3-209ENST00000466222 H0YGN5 161 aa19.47■□□□□ 0.71
CAPN3-209ENST00000466222 LSP1P33241 339 aa19.47■□□□□ 0.71
CAPN3-209ENST00000466222 OR1D2P34982 312 aa19.47■□□□□ 0.71
CAPN3-209ENST00000466222 GRIK1P39086 918 aa19.47■□□□□ 0.71
CAPN3-209ENST00000466222 MDH1P40925 334 aaKnown RBP19.47■□□□□ 0.71
CAPN3-209ENST00000466222 TKTL1P51854 596 aa19.47■□□□□ 0.71
CAPN3-209ENST00000466222 ADCY1Q08828 1119 aa19.47■□□□□ 0.71
CAPN3-209ENST00000466222 DHX34Q14147 1143 aaKnown RBP19.47■□□□□ 0.71
CAPN3-209ENST00000466222 TRADDQ15628 312 aa19.47■□□□□ 0.71
CAPN3-209ENST00000466222 MAPRE1Q15691 268 aaKnown RBP19.47■□□□□ 0.71
CAPN3-209ENST00000466222 PSMD5Q16401 504 aa19.47■□□□□ 0.71
CAPN3-209ENST00000466222 SCN4BQ8IWT1 228 aa19.47■□□□□ 0.71
CAPN3-209ENST00000466222 SCAMP5Q8TAC9 235 aa19.47■□□□□ 0.71
CAPN3-209ENST00000466222 PHOSPHO2Q8TCD6 241 aa19.47■□□□□ 0.71
CAPN3-209ENST00000466222 CLP1Q92989 425 aaKnown RBP19.47■□□□□ 0.71
CAPN3-209ENST00000466222 CLSTN3Q9BQT9 956 aa19.47■□□□□ 0.71
CAPN3-209ENST00000466222 NFS1Q9Y697 457 aa19.47■□□□□ 0.71
CAPN3-209ENST00000466222 OR6C75A6NL08 312 aa19.46■□□□□ 0.71
CAPN3-209ENST00000466222 NDUFAB1O14561 156 aa19.46■□□□□ 0.71
CAPN3-209ENST00000466222 CTNNA1P35221 906 aaKnown RBP19.46■□□□□ 0.71
CAPN3-209ENST00000466222 GSCP56915 257 aaPredicted RBP19.46■□□□□ 0.71
CAPN3-209ENST00000466222 SLC6A3Q01959 620 aa19.46■□□□□ 0.71
CAPN3-209ENST00000466222 C4orf50Q6ZRC1 276 aa19.46■□□□□ 0.71
CAPN3-209ENST00000466222 MICALCLQ6ZW33 695 aa19.46■□□□□ 0.71
CAPN3-209ENST00000466222 TNS4Q8IZW8 715 aa19.46■□□□□ 0.71
CAPN3-209ENST00000466222 LRRC4Q9HBW1 653 aa19.46■□□□□ 0.71
CAPN3-209ENST00000466222 ALG13Q9NP73 1137 aaKnown RBP19.46■□□□□ 0.71
CAPN3-209ENST00000466222 WDR35Q9P2L0 1181 aa19.46■□□□□ 0.71
CAPN3-209ENST00000466222 MTRRQ9UBK8 725 aa19.46■□□□□ 0.71
CAPN3-209ENST00000466222 AMACRQ9UHK6 382 aa19.46■□□□□ 0.71
CAPN3-209ENST00000466222 GGA2Q9UJY4 613 aa19.46■□□□□ 0.71
CAPN3-209ENST00000466222 PCDHB12Q9Y5F1 795 aa19.46■□□□□ 0.71
CAPN3-209ENST00000466222 WDR27A2RRH5 827 aa19.45■□□□□ 0.7
CAPN3-209ENST00000466222 PROSCO94903 275 aa19.45■□□□□ 0.7
CAPN3-209ENST00000466222 FGGP02679 453 aa19.45■□□□□ 0.7
CAPN3-209ENST00000466222 USP17L7P0C7H9 530 aa19.45■□□□□ 0.7
CAPN3-209ENST00000466222 GBP1P32455 592 aa19.45■□□□□ 0.7
CAPN3-209ENST00000466222 EIF3BP55884 814 aaKnown RBP19.45■□□□□ 0.7
CAPN3-209ENST00000466222 DSG1Q02413 1049 aa19.45■□□□□ 0.7
CAPN3-209ENST00000466222 IFRD2Q12894 506 aaPredicted RBP19.45■□□□□ 0.7
CAPN3-209ENST00000466222 UAP1Q16222 522 aaPredicted RBP19.45■□□□□ 0.7
CAPN3-209ENST00000466222 HFE2Q6ZVN8 426 aa19.45■□□□□ 0.7
CAPN3-209ENST00000466222 DDX53Q86TM3 631 aaKnown RBP19.45■□□□□ 0.7
CAPN3-209ENST00000466222 ARFGAP1Q8N6T3 406 aa19.45■□□□□ 0.7
CAPN3-209ENST00000466222 SP7Q8TDD2 431 aaPredicted RBP19.45■□□□□ 0.7
CAPN3-209ENST00000466222 KCTD13Q8WZ19 329 aa19.45■□□□□ 0.7
CAPN3-209ENST00000466222 ALG3Q92685 438 aa19.45■□□□□ 0.7
CAPN3-209ENST00000466222 C17orf80Q9BSJ5 609 aa19.45■□□□□ 0.7
CAPN3-209ENST00000466222 ULBP1Q9BZM6 244 aa19.45■□□□□ 0.7
CAPN3-209ENST00000466222 DMAP1Q9NPF5 467 aaPredicted RBP19.45■□□□□ 0.7
CAPN3-209ENST00000466222 FAM169AQ9Y6X4 670 aa19.45■□□□□ 0.7
CAPN3-209ENST00000466222 TNRC18O15417 2968 aaPredicted RBP19.45■□□□□ 0.7
CAPN3-209ENST00000466222 MTMR11A4FU01 709 aa19.45■□□□□ 0.7
CAPN3-209ENST00000466222 H7C4K7 107 aa19.45■□□□□ 0.7
CAPN3-209ENST00000466222 SPOPO43791 374 aa19.45■□□□□ 0.7
CAPN3-209ENST00000466222 TFE3P19532 575 aaPredicted RBP19.45■□□□□ 0.7
CAPN3-209ENST00000466222 ATP1A2P50993 1020 aa19.45■□□□□ 0.7
CAPN3-209ENST00000466222 ROR1Q01973 937 aa19.45■□□□□ 0.7
CAPN3-209ENST00000466222 DUSP4Q13115 394 aa19.45■□□□□ 0.7
CAPN3-209ENST00000466222 GPR17Q13304 367 aa19.45■□□□□ 0.7
CAPN3-209ENST00000466222 RAB41Q5JT25 222 aa19.45■□□□□ 0.7
CAPN3-209ENST00000466222 TMC3Q7Z5M5 1100 aa19.45■□□□□ 0.7
CAPN3-209ENST00000466222 TADA2BQ86TJ2 420 aa19.45■□□□□ 0.7
CAPN3-209ENST00000466222 CD101Q93033 1021 aa19.45■□□□□ 0.7
CAPN3-209ENST00000466222 CFAP57Q96MR6 1250 aa19.45■□□□□ 0.7
CAPN3-209ENST00000466222 ADAM33Q9BZ11 813 aa19.45■□□□□ 0.7
CAPN3-209ENST00000466222 RASAL2Q9UJF2 1139 aa19.45■□□□□ 0.7
CAPN3-209ENST00000466222 TSC2P49815 1807 aa19.44■□□□□ 0.7
CAPN3-209ENST00000466222 LINC01553A4QN01 128 aa19.44■□□□□ 0.7
CAPN3-209ENST00000466222 TTI1O43156 1089 aa19.44■□□□□ 0.7
CAPN3-209ENST00000466222 DAPK3O43293 454 aa19.44■□□□□ 0.7
CAPN3-209ENST00000466222 ACADSBP45954 432 aa19.44■□□□□ 0.7
CAPN3-209ENST00000466222 GLUD2P49448 558 aa19.44■□□□□ 0.7
CAPN3-209ENST00000466222 DRG2P55039 364 aaKnown RBP19.44■□□□□ 0.7
CAPN3-209ENST00000466222 TAS2R40P59535 323 aa19.44■□□□□ 0.7
CAPN3-209ENST00000466222 ZNF844Q08AG5 666 aa19.44■□□□□ 0.7
CAPN3-209ENST00000466222 NFE2Q16621 373 aaPredicted RBP19.44■□□□□ 0.7
CAPN3-209ENST00000466222 C15orf59Q2T9L4 293 aaPredicted RBP19.44■□□□□ 0.7
CAPN3-209ENST00000466222 SLC8B1Q6J4K2 584 aa19.44■□□□□ 0.7
CAPN3-209ENST00000466222 AADACL2Q6P093 401 aa19.44■□□□□ 0.7
CAPN3-209ENST00000466222 SIX6OS1Q8N1H7 587 aa19.44■□□□□ 0.7
CAPN3-209ENST00000466222 UBL4BQ8N7F7 174 aa19.44■□□□□ 0.7
CAPN3-209ENST00000466222 RXFP2Q8WXD0 754 aa19.44■□□□□ 0.7
CAPN3-209ENST00000466222 NEUROG2Q9H2A3 272 aa19.44■□□□□ 0.7
CAPN3-209ENST00000466222 AAASQ9NRG9 546 aa19.44■□□□□ 0.7
CAPN3-209ENST00000466222 PCDHB5Q9Y5E4 795 aa19.44■□□□□ 0.7
CAPN3-209ENST00000466222 NR2E3Q9Y5X4 410 aa19.44■□□□□ 0.7
CAPN3-209ENST00000466222 SZT2Q5T011 3432 aa19.43■□□□□ 0.7
CAPN3-209ENST00000466222 YJEFN3A6XGL0 299 aa19.43■□□□□ 0.7
CAPN3-209ENST00000466222 E7ENQ6 273 aa19.43■□□□□ 0.7
CAPN3-209ENST00000466222 PSMA2P25787 234 aa19.43■□□□□ 0.7
CAPN3-209ENST00000466222 PGFP49763 221 aa19.43■□□□□ 0.7
CAPN3-209ENST00000466222 MRPS5P82675 430 aaKnown RBP19.43■□□□□ 0.7
CAPN3-209ENST00000466222 TTC31Q49AM3 519 aaPredicted RBP19.43■□□□□ 0.7
CAPN3-209ENST00000466222 DCAF12L1Q5VU92 463 aa19.43■□□□□ 0.7
CAPN3-209ENST00000466222 TXNRD3NBQ6F5E7 133 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms