RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 TRIM7Q9C029 511 aa11.68□□□□□ -0.54
VCP-204ENST00000466100 ASAH2Q9NR71 780 aa11.68□□□□□ -0.54
VCP-204ENST00000466100 PARVAQ9NVD7 372 aa11.68□□□□□ -0.54
VCP-204ENST00000466100 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.68□□□□□ -0.54
VCP-204ENST00000466100 CLDND1Q9NY35 253 aa11.68□□□□□ -0.54
VCP-204ENST00000466100 CLIC5Q9NZA1 410 aa11.68□□□□□ -0.54
VCP-204ENST00000466100 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.68□□□□□ -0.54
VCP-204ENST00000466100 TRIM10Q9UDY6 481 aa11.68□□□□□ -0.54
VCP-204ENST00000466100 CDH22Q9UJ99 828 aa11.68□□□□□ -0.54
VCP-204ENST00000466100 SCINQ9Y6U3 715 aa11.68□□□□□ -0.54
VCP-204ENST00000466100 TMEM191CA6NGB0 347 aa11.67□□□□□ -0.54
VCP-204ENST00000466100 C2CD4BA6NLJ0 364 aa11.67□□□□□ -0.54
VCP-204ENST00000466100 GRAP2O75791 330 aa11.67□□□□□ -0.54
VCP-204ENST00000466100 KRT3P12035 628 aa11.67□□□□□ -0.54
VCP-204ENST00000466100 PTPN2P17706 415 aa11.67□□□□□ -0.54
VCP-204ENST00000466100 GABRR2P28476 465 aa11.67□□□□□ -0.54
VCP-204ENST00000466100 RFC1P35251 1148 aaPredicted RBP11.67□□□□□ -0.54
VCP-204ENST00000466100 PSEN1P49768 467 aa11.67□□□□□ -0.54
VCP-204ENST00000466100 TUBP50607 506 aa11.67□□□□□ -0.54
VCP-204ENST00000466100 HADHBP55084 474 aaKnown RBP11.67□□□□□ -0.54
VCP-204ENST00000466100 YWHAZP63104 245 aaKnown RBP11.67□□□□□ -0.54
VCP-204ENST00000466100 OGDHQ02218 1023 aa11.67□□□□□ -0.54
VCP-204ENST00000466100 ZNF252P-AS1Q0IIN9 211 aa11.67□□□□□ -0.54
VCP-204ENST00000466100 TAF12Q16514 161 aa11.67□□□□□ -0.54
VCP-204ENST00000466100 BSPRYQ5W0U4 402 aa11.67□□□□□ -0.54
VCP-204ENST00000466100 MSANTD2Q6P1R3 559 aa11.67□□□□□ -0.54
VCP-204ENST00000466100 POTEHQ6S545 545 aa11.67□□□□□ -0.54
VCP-204ENST00000466100 BNIPLQ7Z465 357 aa11.67□□□□□ -0.54
VCP-204ENST00000466100 GRASPQ7Z6J2 395 aaPredicted RBP11.67□□□□□ -0.54
VCP-204ENST00000466100 KIAA1328Q86T90 577 aa11.67□□□□□ -0.54
VCP-204ENST00000466100 REXO1L1PQ8IX06 675 aa11.67□□□□□ -0.54
VCP-204ENST00000466100 ARHGAP18Q8N392 663 aa11.67□□□□□ -0.54
VCP-204ENST00000466100 EMC1Q8N766 993 aa11.67□□□□□ -0.54
VCP-204ENST00000466100 SHKBP1Q8TBC3 707 aa11.67□□□□□ -0.54
VCP-204ENST00000466100 NT5C3BQ969T7 300 aa11.67□□□□□ -0.54
VCP-204ENST00000466100 FAM149B1Q96BN6 582 aa11.67□□□□□ -0.54
VCP-204ENST00000466100 TCEAL4Q96EI5 215 aa11.67□□□□□ -0.54
VCP-204ENST00000466100 MCEEQ96PE7 176 aa11.67□□□□□ -0.54
VCP-204ENST00000466100 DDX23Q9BUQ8 820 aaKnown RBP11.67□□□□□ -0.54
VCP-204ENST00000466100 SELENOOQ9BVL4 669 aa11.67□□□□□ -0.54
VCP-204ENST00000466100 NUP85Q9BW27 656 aa11.67□□□□□ -0.54
VCP-204ENST00000466100 ADAM33Q9BZ11 813 aa11.67□□□□□ -0.54
VCP-204ENST00000466100 ADAM7Q9H2U9 754 aa11.67□□□□□ -0.54
VCP-204ENST00000466100 POPDC2Q9HBU9 364 aa11.67□□□□□ -0.54
VCP-204ENST00000466100 OSGEPQ9NPF4 335 aa11.67□□□□□ -0.54
VCP-204ENST00000466100 TLR8Q9NR97 1041 aaKnown RBP11.67□□□□□ -0.54
VCP-204ENST00000466100 KCND1Q9NSA2 647 aa11.67□□□□□ -0.54
VCP-204ENST00000466100 UVRAGQ9P2Y5 699 aa11.67□□□□□ -0.54
VCP-204ENST00000466100 MYO1AQ9UBC5 1043 aa11.67□□□□□ -0.54
VCP-204ENST00000466100 DUSP10Q9Y6W6 482 aa11.67□□□□□ -0.54
VCP-204ENST00000466100 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.66□□□□□ -0.54
VCP-204ENST00000466100 SPDYE4A6NLX3 237 aa11.66□□□□□ -0.54
VCP-204ENST00000466100 DPYSL4O14531 572 aa11.66□□□□□ -0.54
VCP-204ENST00000466100 FGF19O95750 216 aa11.66□□□□□ -0.54
VCP-204ENST00000466100 OLFM2O95897 454 aa11.66□□□□□ -0.54
VCP-204ENST00000466100 OAS1P00973 400 aaKnown RBP11.66□□□□□ -0.54
VCP-204ENST00000466100 IGLV3-25P01717 112 aa11.66□□□□□ -0.54
VCP-204ENST00000466100 CDC25CP30307 473 aa11.66□□□□□ -0.54
VCP-204ENST00000466100 DEKP35659 375 aaKnown RBP11.66□□□□□ -0.54
VCP-204ENST00000466100 MATKP42679 507 aa11.66□□□□□ -0.54
VCP-204ENST00000466100 PPP3CCP48454 512 aa11.66□□□□□ -0.54
VCP-204ENST00000466100 PITX1P78337 314 aaPredicted RBP11.66□□□□□ -0.54
VCP-204ENST00000466100 ITIH3Q06033 890 aa11.66□□□□□ -0.54
VCP-204ENST00000466100 EIF4EBP2Q13542 120 aaPredicted RBP11.66□□□□□ -0.54
VCP-204ENST00000466100 PABPC1LQ4VXU2 614 aaKnown RBP11.66□□□□□ -0.54
VCP-204ENST00000466100 SYPL2Q5VXT5 272 aa11.66□□□□□ -0.54
VCP-204ENST00000466100 RHOT2Q8IXI1 618 aa11.66□□□□□ -0.54
VCP-204ENST00000466100 DEFB106AQ8N104 65 aa11.66□□□□□ -0.54
VCP-204ENST00000466100 SMRP1Q8NCR6 262 aa11.66□□□□□ -0.54
VCP-204ENST00000466100 SLC35G2Q8TBE7 412 aa11.66□□□□□ -0.54
VCP-204ENST00000466100 ZNF564Q8TBZ8 553 aaPredicted RBP11.66□□□□□ -0.54
VCP-204ENST00000466100 KIAA1524Q8TCG1 905 aa11.66□□□□□ -0.54
VCP-204ENST00000466100 FNIP1Q8TF40 1166 aa11.66□□□□□ -0.54
VCP-204ENST00000466100 EDEM1Q92611 657 aa11.66□□□□□ -0.54
VCP-204ENST00000466100 NPY6RQ99463 290 aa11.66□□□□□ -0.54
VCP-204ENST00000466100 TRIM62Q9BVG3 475 aa11.66□□□□□ -0.54
VCP-204ENST00000466100 APOL5Q9BWW9 433 aa11.66□□□□□ -0.54
VCP-204ENST00000466100 CCSER2Q9H7U1 834 aa11.66□□□□□ -0.54
VCP-204ENST00000466100 MRPL47Q9HD33 250 aaKnown RBP11.66□□□□□ -0.54
VCP-204ENST00000466100 ABCC13Q9NSE7 274 aa11.66□□□□□ -0.54
VCP-204ENST00000466100 TRPM5Q9NZQ8 1165 aa11.66□□□□□ -0.54
VCP-204ENST00000466100 CTTNBP2NLQ9P2B4 639 aa11.66□□□□□ -0.54
VCP-204ENST00000466100 NAALADL1Q9UQQ1 740 aa11.66□□□□□ -0.54
VCP-204ENST00000466100 CLUHO75153 1309 aa11.65□□□□□ -0.54
VCP-204ENST00000466100 A0A1W2PRU2 124 aa11.65□□□□□ -0.54
VCP-204ENST00000466100 C2orf78A6NCI8 922 aa11.65□□□□□ -0.54
VCP-204ENST00000466100 USP27XA6NNY8 438 aa11.65□□□□□ -0.54
VCP-204ENST00000466100 TLR5O60602 858 aa11.65□□□□□ -0.54
VCP-204ENST00000466100 MYL4P12829 197 aa11.65□□□□□ -0.54
VCP-204ENST00000466100 RARGP13631 454 aa11.65□□□□□ -0.54
VCP-204ENST00000466100 GJA1P17302 382 aa11.65□□□□□ -0.54
VCP-204ENST00000466100 CEBPBP17676 345 aa11.65□□□□□ -0.54
VCP-204ENST00000466100 TFE3P19532 575 aaPredicted RBP11.65□□□□□ -0.54
VCP-204ENST00000466100 NOS2P35228 1153 aa11.65□□□□□ -0.54
VCP-204ENST00000466100 PTPN9P43378 593 aa11.65□□□□□ -0.54
VCP-204ENST00000466100 ZNF143P52747 638 aaPredicted RBP11.65□□□□□ -0.54
VCP-204ENST00000466100 CYP4F8P98187 520 aa11.65□□□□□ -0.54
VCP-204ENST00000466100 KIF5AQ12840 1032 aa11.65□□□□□ -0.54
VCP-204ENST00000466100 CCDC14Q49A88 953 aa11.65□□□□□ -0.54
VCP-204ENST00000466100 STXBP5Q5T5C0 1151 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms