RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 PTPN9P43378 593 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 GATMP50440 423 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 TKTL1P51854 596 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 KPNA1P52294 538 aaPredicted RBP6.3□□□□□ -1.4
CHMP3-206ENST00000466032 MAP3K7CLP57077 242 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 ERVK-21P61565 698 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 YWHAZP63104 245 aaKnown RBP6.3□□□□□ -1.4
CHMP3-206ENST00000466032 MRPS5P82675 430 aaKnown RBP6.3□□□□□ -1.4
CHMP3-206ENST00000466032 SMAD3P84022 425 aaKnown RBP6.3□□□□□ -1.4
CHMP3-206ENST00000466032 PTSQ03393 145 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 TAF12Q16514 161 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 PPP2R5EQ16537 467 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 PTPROQ16827 1216 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 PTPN20Q4JDL3 420 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 ODF2Q5BJF6 829 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 RTP2Q5QGT7 225 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 FAM102AQ5T9C2 384 aaPredicted RBP6.3□□□□□ -1.4
CHMP3-206ENST00000466032 PAPD7Q5XG87 772 aaKnown RBP6.3□□□□□ -1.4
CHMP3-206ENST00000466032 OR6B2Q6IFH4 312 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 PMF1Q6P1K2 205 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 DENND5BQ6ZUT9 1274 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 PAQR9Q6ZVX9 377 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 STRADAQ7RTN6 431 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 TMC7Q7Z402 723 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 POLNQ7Z5Q5 900 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 PIGZQ86VD9 579 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 MON1AQ86VX9 555 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 PSTKQ8IV42 348 aaKnown RBP6.3□□□□□ -1.4
CHMP3-206ENST00000466032 PASD1Q8IV76 773 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 TCEAL8Q8IYN2 117 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 ELMOD1Q8N336 334 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 KLHL23Q8NBE8 558 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 LEMD2Q8NC56 503 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 STKLD1Q8NE28 680 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 MNS1Q8NEH6 495 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 OR10T2Q8NGX3 314 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 OLIG1Q8TAK6 271 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 UBA3Q8TBC4 463 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 PBKQ96KB5 322 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 C16orf45Q96MC5 204 aaPredicted RBP6.3□□□□□ -1.4
CHMP3-206ENST00000466032 SLITRK1Q96PX8 696 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 CPXM1Q96SM3 734 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 TBCBQ99426 244 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 CDCA3Q99618 268 aaPredicted RBP6.3□□□□□ -1.4
CHMP3-206ENST00000466032 RTP3Q9BQQ7 232 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 ZSWIM1Q9BR11 485 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 CNPY3Q9BT09 278 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 ZBP1Q9H171 429 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 DPEP3Q9H4B8 488 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 SLC28A3Q9HAS3 691 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 POPDC2Q9HBU9 364 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 ACP6Q9NPH0 428 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 TLR9Q9NR96 1032 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 KRT82Q9NSB4 513 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 ABCC13Q9NSE7 274 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 DDX56Q9NY93 547 aaKnown RBP6.3□□□□□ -1.4
CHMP3-206ENST00000466032 DONSONQ9NYP3 566 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 IL37Q9NZH6 218 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 LMCD1Q9NZU5 365 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 CXXC1Q9P0U4 656 aaPredicted RBP6.3□□□□□ -1.4
CHMP3-206ENST00000466032 ANAPC7Q9UJX3 599 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 USP3Q9Y6I4 520 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 ALPK3Q96L96 1907 aa6.3□□□□□ -1.4
CHMP3-206ENST00000466032 CLUHO75153 1309 aa6.29□□□□□ -1.4
CHMP3-206ENST00000466032 TCRBV5S1A1TA0A578 114 aa6.29□□□□□ -1.4
CHMP3-206ENST00000466032 FAM92AA1XBS5 289 aa6.29□□□□□ -1.4
CHMP3-206ENST00000466032 MTMR11A4FU01 709 aa6.29□□□□□ -1.4
CHMP3-206ENST00000466032 RCCD1A6NED2 376 aa6.29□□□□□ -1.4
CHMP3-206ENST00000466032 ZNF487B1APH4 448 aa6.29□□□□□ -1.4
CHMP3-206ENST00000466032 E5RJQ4 531 aa6.29□□□□□ -1.4
CHMP3-206ENST00000466032 I3L4J1 428 aa6.29□□□□□ -1.4
CHMP3-206ENST00000466032 CAPN9O14815 690 aa6.29□□□□□ -1.4
CHMP3-206ENST00000466032 NCK2O43639 380 aa6.29□□□□□ -1.4
CHMP3-206ENST00000466032 SPOPO43791 374 aa6.29□□□□□ -1.4
CHMP3-206ENST00000466032 LILRB3O75022 631 aa6.29□□□□□ -1.4
CHMP3-206ENST00000466032 ATP2C2O75185 946 aa6.29□□□□□ -1.4
CHMP3-206ENST00000466032 PALMO75781 387 aa6.29□□□□□ -1.4
CHMP3-206ENST00000466032 MOCS3O95396 460 aa6.29□□□□□ -1.4
CHMP3-206ENST00000466032 CXCL14O95715 111 aa6.29□□□□□ -1.4
CHMP3-206ENST00000466032 ADH1CP00326 375 aa6.29□□□□□ -1.4
CHMP3-206ENST00000466032 HNRNPA1P09651 372 aaKnown RBP eCLIP6.29□□□□□ -1.4
CHMP3-206ENST00000466032 LINC00271P0C7V0 271 aa6.29□□□□□ -1.4
CHMP3-206ENST00000466032 SRGAP2BP0DMP2 458 aa6.29□□□□□ -1.4
CHMP3-206ENST00000466032 SLC2A3P11169 496 aa6.29□□□□□ -1.4
CHMP3-206ENST00000466032 RALAP11233 206 aa6.29□□□□□ -1.4
CHMP3-206ENST00000466032 ACAT1P24752 427 aaKnown RBP6.29□□□□□ -1.4
CHMP3-206ENST00000466032 OR1D2P34982 312 aa6.29□□□□□ -1.4
CHMP3-206ENST00000466032 MATKP42679 507 aa6.29□□□□□ -1.4
CHMP3-206ENST00000466032 PAFAH1B1P43034 410 aa6.29□□□□□ -1.4
CHMP3-206ENST00000466032 ZNF143P52747 638 aaPredicted RBP6.29□□□□□ -1.4
CHMP3-206ENST00000466032 EPHB3P54753 998 aa6.29□□□□□ -1.4
CHMP3-206ENST00000466032 EPHB4P54760 987 aa6.29□□□□□ -1.4
CHMP3-206ENST00000466032 DAOAP59103 153 aa6.29□□□□□ -1.4
CHMP3-206ENST00000466032 ROR1Q01973 937 aa6.29□□□□□ -1.4
CHMP3-206ENST00000466032 CKAP4Q07065 602 aaKnown RBP6.29□□□□□ -1.4
CHMP3-206ENST00000466032 NNTQ13423 1086 aa6.29□□□□□ -1.4
CHMP3-206ENST00000466032 RPS6KA1Q15418 735 aa6.29□□□□□ -1.4
CHMP3-206ENST00000466032 SHHQ15465 462 aa6.29□□□□□ -1.4
CHMP3-206ENST00000466032 ARL13BQ3SXY8 428 aa6.29□□□□□ -1.4
CHMP3-206ENST00000466032 SLC25A52Q3SY17 297 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms