RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 CGRRF1Q99675 332 aa12.49□□□□□ -0.41
CNOT4-208ENST00000465721 GABRG3Q99928 467 aa12.49□□□□□ -0.41
CNOT4-208ENST00000465721 TRIM9Q9C026 710 aa12.49□□□□□ -0.41
CNOT4-208ENST00000465721 GZF1Q9H116 711 aaPredicted RBP12.49□□□□□ -0.41
CNOT4-208ENST00000465721 IL37Q9NZH6 218 aa12.49□□□□□ -0.41
CNOT4-208ENST00000465721 GMIPQ9P107 970 aa12.49□□□□□ -0.41
CNOT4-208ENST00000465721 SH3BP1Q9Y3L3 701 aa12.49□□□□□ -0.41
CNOT4-208ENST00000465721 CFAP46Q8IYW2 2715 aa12.49□□□□□ -0.41
CNOT4-208ENST00000465721 PTPRQQ9UMZ3 2332 aa12.49□□□□□ -0.41
CNOT4-208ENST00000465721 SH3BP5O60239 455 aa12.48□□□□□ -0.41
CNOT4-208ENST00000465721 CACNG3O60359 315 aa12.48□□□□□ -0.41
CNOT4-208ENST00000465721 ZNF217O75362 1048 aa12.48□□□□□ -0.41
CNOT4-208ENST00000465721 STAU1O95793 577 aaKnown RBP12.48□□□□□ -0.41
CNOT4-208ENST00000465721 SYPP08247 313 aa12.48□□□□□ -0.41
CNOT4-208ENST00000465721 FAM163BP0C2L3 166 aa12.48□□□□□ -0.41
CNOT4-208ENST00000465721 FTH1P19P0C7X4 201 aa12.48□□□□□ -0.41
CNOT4-208ENST00000465721 DLATP10515 647 aaKnown RBP12.48□□□□□ -0.41
CNOT4-208ENST00000465721 IRF1P10914 325 aa12.48□□□□□ -0.41
CNOT4-208ENST00000465721 RDXP35241 583 aaKnown RBP12.48□□□□□ -0.41
CNOT4-208ENST00000465721 TNNC1P63316 161 aa12.48□□□□□ -0.41
CNOT4-208ENST00000465721 SCAPQ12770 1279 aa12.48□□□□□ -0.41
CNOT4-208ENST00000465721 SLC14A1Q13336 389 aa12.48□□□□□ -0.41
CNOT4-208ENST00000465721 SNRNP35Q16560 246 aaKnown RBP12.48□□□□□ -0.41
CNOT4-208ENST00000465721 ANO4Q32M45 955 aa12.48□□□□□ -0.41
CNOT4-208ENST00000465721 WDR72Q3MJ13 1102 aa12.48□□□□□ -0.41
CNOT4-208ENST00000465721 PREPLQ4J6C6 727 aaPredicted RBP12.48□□□□□ -0.41
CNOT4-208ENST00000465721 HECTD3Q5T447 861 aa12.48□□□□□ -0.41
CNOT4-208ENST00000465721 GRAMD4Q6IC98 578 aa12.48□□□□□ -0.41
CNOT4-208ENST00000465721 CCDC73Q6ZRK6 1079 aa12.48□□□□□ -0.41
CNOT4-208ENST00000465721 PAQR9Q6ZVX9 377 aa12.48□□□□□ -0.41
CNOT4-208ENST00000465721 NAXDQ8IW45 347 aa12.48□□□□□ -0.41
CNOT4-208ENST00000465721 IPO4Q8TEX9 1081 aaKnown RBP12.48□□□□□ -0.41
CNOT4-208ENST00000465721 ERLEC1Q96DZ1 483 aa12.48□□□□□ -0.41
CNOT4-208ENST00000465721 KCNK16Q96T55 309 aa12.48□□□□□ -0.41
CNOT4-208ENST00000465721 XYLT2Q9H1B5 865 aa12.48□□□□□ -0.41
CNOT4-208ENST00000465721 SLC6A17Q9H1V8 727 aa12.48□□□□□ -0.41
CNOT4-208ENST00000465721 SMYD3Q9H7B4 428 aa12.48□□□□□ -0.41
CNOT4-208ENST00000465721 DNAJC17Q9NVM6 304 aaKnown RBP12.48□□□□□ -0.41
CNOT4-208ENST00000465721 NYNRINQ9P2P1 1898 aaKnown RBP12.48□□□□□ -0.41
CNOT4-208ENST00000465721 ATP8B3O60423 1300 aa12.47□□□□□ -0.41
CNOT4-208ENST00000465721 A8MXQ7 604 aa12.47□□□□□ -0.41
CNOT4-208ENST00000465721 PRRT4C9JH25 899 aa12.47□□□□□ -0.41
CNOT4-208ENST00000465721 PGFP49763 221 aa12.47□□□□□ -0.41
CNOT4-208ENST00000465721 CYP24A1Q07973 514 aa12.47□□□□□ -0.41
CNOT4-208ENST00000465721 GRIK2Q13002 908 aa12.47□□□□□ -0.41
CNOT4-208ENST00000465721 PSMD6Q15008 389 aa12.47□□□□□ -0.41
CNOT4-208ENST00000465721 TRIP6Q15654 476 aaKnown RBP12.47□□□□□ -0.41
CNOT4-208ENST00000465721 PLEKHG6Q3KR16 790 aa12.47□□□□□ -0.41
CNOT4-208ENST00000465721 C19orf48Q6RUI8 117 aa12.47□□□□□ -0.41
CNOT4-208ENST00000465721 TOGARAM2Q6ZUX3 1019 aa12.47□□□□□ -0.41
CNOT4-208ENST00000465721 EPM2AIP1Q7L775 607 aaPredicted RBP12.47□□□□□ -0.41
CNOT4-208ENST00000465721 PDZD3Q86UT5 571 aa12.47□□□□□ -0.41
CNOT4-208ENST00000465721 CCDC65Q8IXS2 484 aa12.47□□□□□ -0.41
CNOT4-208ENST00000465721 CHPFQ8IZ52 775 aa12.47□□□□□ -0.41
CNOT4-208ENST00000465721 PNPLA1Q8N8W4 532 aa12.47□□□□□ -0.41
CNOT4-208ENST00000465721 ZNF516Q92618 1163 aa12.47□□□□□ -0.41
CNOT4-208ENST00000465721 ZNF419Q96HQ0 510 aaPredicted RBP12.47□□□□□ -0.41
CNOT4-208ENST00000465721 MRGPRX1Q96LB2 322 aa12.47□□□□□ -0.41
CNOT4-208ENST00000465721 KIAA1586Q9HCI6 787 aa12.47□□□□□ -0.41
CNOT4-208ENST00000465721 DMAP1Q9NPF5 467 aaPredicted RBP12.47□□□□□ -0.41
CNOT4-208ENST00000465721 AGPAT3Q9NRZ7 376 aa12.47□□□□□ -0.41
CNOT4-208ENST00000465721 MARK1Q9P0L2 795 aa12.47□□□□□ -0.41
CNOT4-208ENST00000465721 SUSD2Q9UGT4 822 aa12.47□□□□□ -0.41
CNOT4-208ENST00000465721 CHORDC1Q9UHD1 332 aaPredicted RBP12.47□□□□□ -0.41
CNOT4-208ENST00000465721 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.47□□□□□ -0.41
CNOT4-208ENST00000465721 RAD54BQ9Y620 910 aa12.47□□□□□ -0.41
CNOT4-208ENST00000465721 MORC2Q9Y6X9 1032 aaPredicted RBP12.47□□□□□ -0.41
CNOT4-208ENST00000465721 PLXNA2O75051 1894 aa12.46□□□□□ -0.41
CNOT4-208ENST00000465721 VPS37CA5D8V6 355 aaPredicted RBP12.46□□□□□ -0.41
CNOT4-208ENST00000465721 NEDD8-MDP1E9PL57 170 aa12.46□□□□□ -0.41
CNOT4-208ENST00000465721 EIF3DO15371 548 aaKnown RBP eCLIP12.46□□□□□ -0.41
CNOT4-208ENST00000465721 TGFB1I1O43294 461 aa12.46□□□□□ -0.41
CNOT4-208ENST00000465721 TLR5O60602 858 aa12.46□□□□□ -0.41
CNOT4-208ENST00000465721 CBFA2T3O75081 653 aa12.46□□□□□ -0.41
CNOT4-208ENST00000465721 TYRP14679 529 aa12.46□□□□□ -0.41
CNOT4-208ENST00000465721 TNNI1P19237 187 aa12.46□□□□□ -0.41
CNOT4-208ENST00000465721 MYL6P60660 151 aa12.46□□□□□ -0.41
CNOT4-208ENST00000465721 COL28A1Q2UY09 1125 aa12.46□□□□□ -0.41
CNOT4-208ENST00000465721 SOWAHCQ53LP3 525 aaPredicted RBP12.46□□□□□ -0.41
CNOT4-208ENST00000465721 FAM173BQ6P4H8 233 aa12.46□□□□□ -0.41
CNOT4-208ENST00000465721 CCNI2Q6ZMN8 369 aaPredicted RBP12.46□□□□□ -0.41
CNOT4-208ENST00000465721 NUDT18Q6ZVK8 323 aa12.46□□□□□ -0.41
CNOT4-208ENST00000465721 STXBP4Q6ZWJ1 553 aa12.46□□□□□ -0.41
CNOT4-208ENST00000465721 HTR3DQ70Z44 454 aa12.46□□□□□ -0.41
CNOT4-208ENST00000465721 ZMIZ2Q8NF64 920 aa12.46□□□□□ -0.41
CNOT4-208ENST00000465721 SMARCD1Q96GM5 515 aa12.46□□□□□ -0.41
CNOT4-208ENST00000465721 PANK2Q9BZ23 570 aa12.46□□□□□ -0.41
CNOT4-208ENST00000465721 FAM124BQ9H5Z6 455 aaPredicted RBP12.46□□□□□ -0.41
CNOT4-208ENST00000465721 KRT82Q9NSB4 513 aa12.46□□□□□ -0.41
CNOT4-208ENST00000465721 CACNA2D2Q9NY47 1150 aa12.46□□□□□ -0.41
CNOT4-208ENST00000465721 NXF1Q9UBU9 619 aaKnown RBP12.46□□□□□ -0.41
CNOT4-208ENST00000465721 MYLKQ15746 1914 aa12.46□□□□□ -0.42
CNOT4-208ENST00000465721 CLCN6P51797 869 aa12.45□□□□□ -0.42
CNOT4-208ENST00000465721 E2F4Q16254 413 aa12.45□□□□□ -0.42
CNOT4-208ENST00000465721 KIAA1324Q6UXG2 1013 aaKnown RBP12.45□□□□□ -0.42
CNOT4-208ENST00000465721 GLRX5Q86SX6 157 aa12.45□□□□□ -0.42
CNOT4-208ENST00000465721 RGL4Q8IZJ4 473 aa12.45□□□□□ -0.42
CNOT4-208ENST00000465721 FUKQ8N0W3 1084 aa12.45□□□□□ -0.42
CNOT4-208ENST00000465721 PDILTQ8N807 584 aa12.45□□□□□ -0.42
CNOT4-208ENST00000465721 RDH13Q8NBN7 331 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms